RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
SMC1A-206ENST00000470241 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
SMC1A-206ENST00000470241 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
SMC1A-206ENST00000470241 A8MWP4 228 aa5.7□□□□□ -1.5
SMC1A-206ENST00000470241 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
SMC1A-206ENST00000470241 LINC00313P59037 77 aa5.69□□□□□ -1.5
SMC1A-206ENST00000470241 RPL37P61927 97 aaKnown RBP5.69□□□□□ -1.5
SMC1A-206ENST00000470241 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
SMC1A-206ENST00000470241 C8orf87E5RJ46 101 aa5.68□□□□□ -1.5
SMC1A-206ENST00000470241 NDUFB1O75438 58 aa5.68□□□□□ -1.5
SMC1A-206ENST00000470241 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
SMC1A-206ENST00000470241 BPY2O14599 106 aa5.67□□□□□ -1.5
SMC1A-206ENST00000470241 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
SMC1A-206ENST00000470241 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
SMC1A-206ENST00000470241 Q75L30 129 aa5.66□□□□□ -1.5
SMC1A-206ENST00000470241 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
SMC1A-206ENST00000470241 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
SMC1A-206ENST00000470241 A8MUU9 505 aa5.65□□□□□ -1.5
SMC1A-206ENST00000470241 ACYP1P07311 99 aa5.65□□□□□ -1.5
SMC1A-206ENST00000470241 K7EQZ3 153 aa5.64□□□□□ -1.51
SMC1A-206ENST00000470241 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
SMC1A-206ENST00000470241 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
SMC1A-206ENST00000470241 Q8N9L7 120 aa5.63□□□□□ -1.51
SMC1A-206ENST00000470241 MUC2Q02817 5179 aa5.62□□□□□ -1.51
SMC1A-206ENST00000470241 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
SMC1A-206ENST00000470241 MMP24-AS1A0A0U1RRL7 71 aa5.61□□□□□ -1.51
SMC1A-206ENST00000470241 CXCL6P80162 114 aa5.59□□□□□ -1.51
SMC1A-206ENST00000470241 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
SMC1A-206ENST00000470241 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-206ENST00000470241 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
SMC1A-206ENST00000470241 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
SMC1A-206ENST00000470241 J3QR89 54 aa5.56□□□□□ -1.52
SMC1A-206ENST00000470241 MRPL34Q9BQ48 92 aaKnown RBP5.56□□□□□ -1.52
SMC1A-206ENST00000470241 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
SMC1A-206ENST00000470241 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
SMC1A-206ENST00000470241 LINC00643Q86TS7 51 aa5.54□□□□□ -1.52
SMC1A-206ENST00000470241 CASC2Q6XLA1 102 aa5.53□□□□□ -1.52
SMC1A-206ENST00000470241 HCG22E2RYF7 251 aa5.52□□□□□ -1.53
SMC1A-206ENST00000470241 ZCCHC13Q8WW36 166 aaKnown RBP5.51□□□□□ -1.53
SMC1A-206ENST00000470241 K7ERU9 68 aa5.49□□□□□ -1.53
SMC1A-206ENST00000470241 NDUFS5O43920 106 aa5.49□□□□□ -1.53
SMC1A-206ENST00000470241 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
SMC1A-206ENST00000470241 HIST1H4AP62805 103 aaKnown RBP5.47□□□□□ -1.53
SMC1A-206ENST00000470241 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
SMC1A-206ENST00000470241 Q5W150 140 aa5.45□□□□□ -1.54
SMC1A-206ENST00000470241 A0A087WVE0 104 aa5.44□□□□□ -1.54
SMC1A-206ENST00000470241 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
SMC1A-206ENST00000470241 SPINK7P58062 85 aa5.42□□□□□ -1.54
SMC1A-206ENST00000470241 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
SMC1A-206ENST00000470241 HRES1P13985 223 aa5.41□□□□□ -1.54
SMC1A-206ENST00000470241 MT-ATP8P03928 68 aa5.39□□□□□ -1.55
SMC1A-206ENST00000470241 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
SMC1A-206ENST00000470241 MPLKIPQ8TAP9 179 aa5.37□□□□□ -1.55
SMC1A-206ENST00000470241 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
SMC1A-206ENST00000470241 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
SMC1A-206ENST00000470241 IGKV2D-30A0A075B6S6 120 aa5.35□□□□□ -1.55
SMC1A-206ENST00000470241 IGKV2-30P06310 120 aa5.35□□□□□ -1.55
SMC1A-206ENST00000470241 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
SMC1A-206ENST00000470241 C7orf65Q6ZTY9 151 aa5.34□□□□□ -1.55
SMC1A-206ENST00000470241 UQCRQO14949 82 aa5.33□□□□□ -1.56
SMC1A-206ENST00000470241 MT1HP80294 61 aa5.32□□□□□ -1.56
SMC1A-206ENST00000470241 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
SMC1A-206ENST00000470241 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
SMC1A-206ENST00000470241 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
SMC1A-206ENST00000470241 FAM236DA0A1B0GTK5 79 aa5.29□□□□□ -1.56
SMC1A-206ENST00000470241 FAM236CP0DP71 79 aa5.29□□□□□ -1.56
SMC1A-206ENST00000470241 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
SMC1A-206ENST00000470241 H0Y9P7 68 aa5.28□□□□□ -1.56
SMC1A-206ENST00000470241 SCGB1A1P11684 91 aa5.27□□□□□ -1.57
SMC1A-206ENST00000470241 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
SMC1A-206ENST00000470241 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
SMC1A-206ENST00000470241 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
SMC1A-206ENST00000470241 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
SMC1A-206ENST00000470241 ATOX1O00244 68 aa5.25□□□□□ -1.57
SMC1A-206ENST00000470241 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
SMC1A-206ENST00000470241 C5orf47Q569G3 176 aa5.23□□□□□ -1.57
SMC1A-206ENST00000470241 MP68P56378 58 aa5.22□□□□□ -1.57
SMC1A-206ENST00000470241 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
SMC1A-206ENST00000470241 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
SMC1A-206ENST00000470241 M0R2T5 61 aa5.2□□□□□ -1.58
SMC1A-206ENST00000470241 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
SMC1A-206ENST00000470241 TRAV7A0A075B6U4 112 aa5.19□□□□□ -1.58
SMC1A-206ENST00000470241 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
SMC1A-206ENST00000470241 SMIM20Q8N5G0 67 aa5.19□□□□□ -1.58
SMC1A-206ENST00000470241 H3BPC8 53 aa5.18□□□□□ -1.58
SMC1A-206ENST00000470241 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
SMC1A-206ENST00000470241 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
SMC1A-206ENST00000470241 KLKP1Q107X0 134 aa5.16□□□□□ -1.58
SMC1A-206ENST00000470241 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
SMC1A-206ENST00000470241 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
SMC1A-206ENST00000470241 SNURFQ9Y675 71 aa5.07□□□□□ -1.6
SMC1A-206ENST00000470241 S4R3F8 94 aa5.07□□□□□ -1.6
SMC1A-206ENST00000470241 C20orf197Q8N268 126 aa5.06□□□□□ -1.6
SMC1A-206ENST00000470241 A8MUN3 132 aa5.05□□□□□ -1.6
SMC1A-206ENST00000470241 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
SMC1A-206ENST00000470241 LCA10Q71F78 164 aa5.05□□□□□ -1.6
SMC1A-206ENST00000470241 MT2AP02795 61 aa5.03□□□□□ -1.6
SMC1A-206ENST00000470241 COX7CP15954 63 aa5.03□□□□□ -1.6
SMC1A-206ENST00000470241 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
SMC1A-206ENST00000470241 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms