RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZFHX4Q86UP3 3567 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
BRCA2-202ENST00000470094 NF1P21359 2839 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 ATMQ13315 3056 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 CFAP54Q96N23 3096 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 F8P00451 2351 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 EP300Q09472 2414 aaPredicted RBP0.56□□□□□ -2.32
BRCA2-202ENST00000470094 SPENQ96T58 3664 aaKnown RBP0.56□□□□□ -2.32
BRCA2-202ENST00000470094 CEP290O15078 2479 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 CHD6Q8TD26 2715 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 DEFB108AA8MXU0 73 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 M0QZ58 72 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 PRO0255Q9UI72 69 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 PRUNE2Q8WUY3 3088 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 AKAP13Q12802 2813 aa0.56□□□□□ -2.32
BRCA2-202ENST00000470094 ANK2Q01484 3957 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 ATRQ13535 2644 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 CEP250Q9BV73 2442 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 FAT2Q9NYQ8 4349 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 PDZD2O15018 2839 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH2Q9P225 4427 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 H3BUX3 64 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 PKHD1L1Q86WI1 4243 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 CRYBG3Q68DQ2 2970 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 FRYLO94915 3013 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
BRCA2-202ENST00000470094 LYSTQ99698 3801 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 AKAP9Q99996 3911 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 WDR87Q6ZQQ6 2873 aa0.55□□□□□ -2.32
BRCA2-202ENST00000470094 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
BRCA2-202ENST00000470094 RELNP78509 3460 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 C5orf42Q9H799 3197 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 KMT2AQ03164 3969 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 COX14Q96I36 57 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 EPG5Q9HCE0 2579 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH1Q9P2D7 4330 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 CELSR3Q9NYQ7 3312 aa0.54□□□□□ -2.32
BRCA2-202ENST00000470094 TRIOO75962 3097 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 HECTD1Q9ULT8 2610 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 ZZEF1O43149 2961 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 DMXL2Q8TDJ6 3036 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 SMG1Q96Q15 3661 aaKnown RBP0.53□□□□□ -2.32
BRCA2-202ENST00000470094 HSPG2P98160 4391 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 DEFB104AQ8WTQ1 72 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 SMR3AQ99954 134 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 DNAH10Q8IVF4 4471 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 POLQO75417 2590 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 MKI67P46013 3256 aaKnown RBP0.53□□□□□ -2.32
BRCA2-202ENST00000470094 ITPR3Q14573 2671 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 PKD1P98161 4303 aa0.53□□□□□ -2.32
BRCA2-202ENST00000470094 DMXL1Q9Y485 3027 aa0.53□□□□□ -2.33
BRCA2-202ENST00000470094 NBASA2RRP1 2371 aa0.53□□□□□ -2.33
BRCA2-202ENST00000470094 VPS13BQ7Z7G8 4022 aa0.53□□□□□ -2.33
BRCA2-202ENST00000470094 DNAH3Q8TD57 4116 aa0.53□□□□□ -2.33
BRCA2-202ENST00000470094 FLNCQ14315 2725 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 SPTBN5Q9NRC6 3674 aaKnown RBP0.52□□□□□ -2.33
BRCA2-202ENST00000470094 TTC28Q96AY4 2481 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 H0YGG7 62 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 CHD8Q9HCK8 2581 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 HTTP42858 3142 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 SZT2Q5T011 3432 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
BRCA2-202ENST00000470094 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 ITPR1Q14643 2758 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 BOD1L1Q8NFC6 3051 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 DNAH7Q8WXX0 4024 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 LAMA5O15230 3695 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 NCOR1O75376 2440 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 TACC2O95359 2948 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
BRCA2-202ENST00000470094 RIF1Q5UIP0 2472 aaKnown RBP0.5□□□□□ -2.33
BRCA2-202ENST00000470094 FAM186AA6NE01 2351 aa0.5□□□□□ -2.33
BRCA2-202ENST00000470094 DMDP11532 3685 aa0.5□□□□□ -2.33
BRCA2-202ENST00000470094 SPINK6Q6UWN8 80 aa0.5□□□□□ -2.33
BRCA2-202ENST00000470094 MAP1BP46821 2468 aaKnown RBP0.5□□□□□ -2.33
BRCA2-202ENST00000470094 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
BRCA2-202ENST00000470094 KALRNO60229 2985 aa0.5□□□□□ -2.33
BRCA2-202ENST00000470094 ZANQ9Y493 2812 aa0.5□□□□□ -2.33
BRCA2-202ENST00000470094 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
BRCA2-202ENST00000470094 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 USP9YO00507 2555 aaPredicted RBP0.49□□□□□ -2.33
BRCA2-202ENST00000470094 SPINK1P00995 79 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 RHPN1-AS1Q9BWJ2 59 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 PIEZO1Q92508 2521 aa0.49□□□□□ -2.33
BRCA2-202ENST00000470094 MAP1AP78559 2803 aaPredicted RBP0.49□□□□□ -2.33
BRCA2-202ENST00000470094 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
BRCA2-202ENST00000470094 CMYA5Q8N3K9 4069 aa0.48□□□□□ -2.33
BRCA2-202ENST00000470094 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
BRCA2-202ENST00000470094 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
BRCA2-202ENST00000470094 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms