RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
CPSF4-210ENST00000469897 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
CPSF4-210ENST00000469897 TRACP01848 142 aa6.61□□□□□ -1.35
CPSF4-210ENST00000469897 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
CPSF4-210ENST00000469897 HSD52Q0P140 79 aa6.6□□□□□ -1.35
CPSF4-210ENST00000469897 BATFQ16520 125 aa6.6□□□□□ -1.35
CPSF4-210ENST00000469897 COX6CP09669 75 aa6.59□□□□□ -1.35
CPSF4-210ENST00000469897 MT1FP04733 61 aa6.58□□□□□ -1.36
CPSF4-210ENST00000469897 VPS25Q9BRG1 176 aa6.58□□□□□ -1.36
CPSF4-210ENST00000469897 LCE2BO14633 110 aa6.57□□□□□ -1.36
CPSF4-210ENST00000469897 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
CPSF4-210ENST00000469897 UBE2V1Q13404 147 aa6.57□□□□□ -1.36
CPSF4-210ENST00000469897 TAX1BP3O14907 124 aa6.56□□□□□ -1.36
CPSF4-210ENST00000469897 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
CPSF4-210ENST00000469897 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
CPSF4-210ENST00000469897 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
CPSF4-210ENST00000469897 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
CPSF4-210ENST00000469897 SCGB1C2P0DMR2 95 aa6.53□□□□□ -1.36
CPSF4-210ENST00000469897 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
CPSF4-210ENST00000469897 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
CPSF4-210ENST00000469897 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
CPSF4-210ENST00000469897 SPINK7P58062 85 aa6.51□□□□□ -1.37
CPSF4-210ENST00000469897 ZCCHC13Q8WW36 166 aaKnown RBP6.51□□□□□ -1.37
CPSF4-210ENST00000469897 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
CPSF4-210ENST00000469897 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
CPSF4-210ENST00000469897 BAALC-AS2P0C853 105 aa6.49□□□□□ -1.37
CPSF4-210ENST00000469897 C9JAW5 83 aa6.48□□□□□ -1.37
CPSF4-210ENST00000469897 J3KT08 172 aa6.48□□□□□ -1.37
CPSF4-210ENST00000469897 Q6ZQT0 140 aa6.47□□□□□ -1.37
CPSF4-210ENST00000469897 NDUFB1O75438 58 aa6.45□□□□□ -1.38
CPSF4-210ENST00000469897 C21orf62-AS1Q17RA5 79 aa6.44□□□□□ -1.38
CPSF4-210ENST00000469897 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-210ENST00000469897 LYRM7Q5U5X0 104 aa6.43□□□□□ -1.38
CPSF4-210ENST00000469897 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
CPSF4-210ENST00000469897 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
CPSF4-210ENST00000469897 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
CPSF4-210ENST00000469897 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
CPSF4-210ENST00000469897 K7EP34 96 aa6.4□□□□□ -1.38
CPSF4-210ENST00000469897 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
CPSF4-210ENST00000469897 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
CPSF4-210ENST00000469897 A8MWP4 228 aa6.39□□□□□ -1.39
CPSF4-210ENST00000469897 GTF2H5Q6ZYL4 71 aa6.39□□□□□ -1.39
CPSF4-210ENST00000469897 NAA38Q9BRA0 125 aaKnown RBP6.39□□□□□ -1.39
CPSF4-210ENST00000469897 JMJD7-PLA2G4BH0Y9G9 81 aa6.37□□□□□ -1.39
CPSF4-210ENST00000469897 SPCS1Q9Y6A9 102 aa6.37□□□□□ -1.39
CPSF4-210ENST00000469897 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
CPSF4-210ENST00000469897 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
CPSF4-210ENST00000469897 Q6ZVQ6 151 aa6.36□□□□□ -1.39
CPSF4-210ENST00000469897 A0A1B0GW54 56 aa6.35□□□□□ -1.39
CPSF4-210ENST00000469897 PDE6GP18545 87 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 NREPQ16612 68 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 PRR15Q8IV56 129 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 C14orf132Q9NPU4 83 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
CPSF4-210ENST00000469897 F8W1H4 67 aa6.3□□□□□ -1.4
CPSF4-210ENST00000469897 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
CPSF4-210ENST00000469897 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
CPSF4-210ENST00000469897 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
CPSF4-210ENST00000469897 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
CPSF4-210ENST00000469897 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
CPSF4-210ENST00000469897 NDUFS5O43920 106 aa6.27□□□□□ -1.41
CPSF4-210ENST00000469897 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
CPSF4-210ENST00000469897 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CPSF4-210ENST00000469897 K7EQZ3 153 aa6.24□□□□□ -1.41
CPSF4-210ENST00000469897 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
CPSF4-210ENST00000469897 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
CPSF4-210ENST00000469897 Q5W150 140 aa6.21□□□□□ -1.42
CPSF4-210ENST00000469897 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
CPSF4-210ENST00000469897 K7ERU9 68 aa6.18□□□□□ -1.42
CPSF4-210ENST00000469897 BPY2O14599 106 aa6.18□□□□□ -1.42
CPSF4-210ENST00000469897 H3BT86 120 aa6.16□□□□□ -1.42
CPSF4-210ENST00000469897 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
CPSF4-210ENST00000469897 Q8N9L7 120 aa6.15□□□□□ -1.42
CPSF4-210ENST00000469897 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
CPSF4-210ENST00000469897 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
CPSF4-210ENST00000469897 CASC2Q6XLA1 102 aa6.13□□□□□ -1.43
CPSF4-210ENST00000469897 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
CPSF4-210ENST00000469897 J3QR89 54 aa6.12□□□□□ -1.43
CPSF4-210ENST00000469897 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
CPSF4-210ENST00000469897 CXCL6P80162 114 aa6.06□□□□□ -1.44
CPSF4-210ENST00000469897 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
CPSF4-210ENST00000469897 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
CPSF4-210ENST00000469897 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
CPSF4-210ENST00000469897 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
CPSF4-210ENST00000469897 A6NN06 94 aa6□□□□□ -1.45
CPSF4-210ENST00000469897 CSAG1Q6PB30 78 aa6□□□□□ -1.45
CPSF4-210ENST00000469897 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
CPSF4-210ENST00000469897 NEBP20929 6669 aa5.99□□□□□ -1.45
CPSF4-210ENST00000469897 MT1BP07438 61 aa5.99□□□□□ -1.45
CPSF4-210ENST00000469897 S4R3F8 94 aa5.99□□□□□ -1.45
CPSF4-210ENST00000469897 ACYP1P07311 99 aa5.98□□□□□ -1.45
CPSF4-210ENST00000469897 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
CPSF4-210ENST00000469897 Q5VV11 94 aa5.97□□□□□ -1.45
CPSF4-210ENST00000469897 LCA10Q71F78 164 aa5.97□□□□□ -1.45
CPSF4-210ENST00000469897 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
CPSF4-210ENST00000469897 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
CPSF4-210ENST00000469897 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
CPSF4-210ENST00000469897 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
CPSF4-210ENST00000469897 TP53AIP1Q9HCN2 124 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms