RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
MRPL28-208ENST00000469744 J3KT08 172 aa10.23□□□□□ -0.77
MRPL28-208ENST00000469744 K7EQZ3 153 aa10.23□□□□□ -0.77
MRPL28-208ENST00000469744 SS18L2Q9UHA2 77 aa10.23□□□□□ -0.77
MRPL28-208ENST00000469744 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
MRPL28-208ENST00000469744 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.78
MRPL28-208ENST00000469744 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
MRPL28-208ENST00000469744 HCG22E2RYF7 251 aa10.18□□□□□ -0.78
MRPL28-208ENST00000469744 TMEM258P61165 79 aa10.18□□□□□ -0.78
MRPL28-208ENST00000469744 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
MRPL28-208ENST00000469744 A8MWP4 228 aa10.17□□□□□ -0.78
MRPL28-208ENST00000469744 MOBPQ13875 183 aa10.17□□□□□ -0.78
MRPL28-208ENST00000469744 LINC00304Q8N9R0 145 aa10.16□□□□□ -0.78
MRPL28-208ENST00000469744 CYSTM1Q9H1C7 97 aa10.16□□□□□ -0.78
MRPL28-208ENST00000469744 PRR15Q8IV56 129 aa10.15□□□□□ -0.78
MRPL28-208ENST00000469744 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
MRPL28-208ENST00000469744 SSBP3-AS1Q7Z2R9 100 aa10.14□□□□□ -0.79
MRPL28-208ENST00000469744 RETNLBQ9BQ08 111 aa10.14□□□□□ -0.79
MRPL28-208ENST00000469744 NDUFC1O43677 76 aa10.13□□□□□ -0.79
MRPL28-208ENST00000469744 CD164Q04900 197 aa10.13□□□□□ -0.79
MRPL28-208ENST00000469744 Q96NJ1 140 aa10.1□□□□□ -0.79
MRPL28-208ENST00000469744 NDUFB1O75438 58 aa10.1□□□□□ -0.79
MRPL28-208ENST00000469744 TMEM254Q8TBM7 123 aa10.1□□□□□ -0.79
MRPL28-208ENST00000469744 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
MRPL28-208ENST00000469744 H7BZZ5 65 aa10.06□□□□□ -0.8
MRPL28-208ENST00000469744 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 CASC2Q6XLA1 102 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
MRPL28-208ENST00000469744 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
MRPL28-208ENST00000469744 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
MRPL28-208ENST00000469744 FAM236DA0A1B0GTK5 79 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 FAM236CP0DP71 79 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
MRPL28-208ENST00000469744 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 Q5XG85 94 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 SPAG11AQ6PDA7 123 aa9.98□□□□□ -0.81
MRPL28-208ENST00000469744 C4orf48Q5BLP8 95 aa9.97□□□□□ -0.81
MRPL28-208ENST00000469744 ZCCHC13Q8WW36 166 aaKnown RBP9.97□□□□□ -0.81
MRPL28-208ENST00000469744 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
MRPL28-208ENST00000469744 MUC2Q02817 5179 aa9.96□□□□□ -0.82
MRPL28-208ENST00000469744 hDV103S1A0JD37 113 aa9.95□□□□□ -0.82
MRPL28-208ENST00000469744 H3BPC8 53 aa9.95□□□□□ -0.82
MRPL28-208ENST00000469744 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
MRPL28-208ENST00000469744 MP68P56378 58 aa9.92□□□□□ -0.82
MRPL28-208ENST00000469744 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
MRPL28-208ENST00000469744 SPINK1P00995 79 aa9.89□□□□□ -0.83
MRPL28-208ENST00000469744 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
MRPL28-208ENST00000469744 C8orf87E5RJ46 101 aa9.87□□□□□ -0.83
MRPL28-208ENST00000469744 SERP1Q9Y6X1 66 aa9.87□□□□□ -0.83
MRPL28-208ENST00000469744 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
MRPL28-208ENST00000469744 H0Y9P7 68 aa9.85□□□□□ -0.83
MRPL28-208ENST00000469744 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
MRPL28-208ENST00000469744 MRPL34Q9BQ48 92 aaKnown RBP9.85□□□□□ -0.83
MRPL28-208ENST00000469744 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
MRPL28-208ENST00000469744 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
MRPL28-208ENST00000469744 C1orf195Q5TG92 126 aa9.8□□□□□ -0.84
MRPL28-208ENST00000469744 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
MRPL28-208ENST00000469744 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
MRPL28-208ENST00000469744 NOTCH2NLQ7Z3S9 236 aa9.77□□□□□ -0.85
MRPL28-208ENST00000469744 MUC17Q685J3 4493 aa9.76□□□□□ -0.85
MRPL28-208ENST00000469744 C1orf64Q8NEQ6 169 aa9.76□□□□□ -0.85
MRPL28-208ENST00000469744 SPANXA2-OT1Q8N9U9 137 aa9.73□□□□□ -0.85
MRPL28-208ENST00000469744 CYP4F30PQ9H0H9 118 aa9.73□□□□□ -0.85
MRPL28-208ENST00000469744 NDUFS5O43920 106 aa9.72□□□□□ -0.85
MRPL28-208ENST00000469744 LINC00313P59037 77 aa9.72□□□□□ -0.85
MRPL28-208ENST00000469744 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
MRPL28-208ENST00000469744 SMIM26A0A096LP01 95 aa9.66□□□□□ -0.86
MRPL28-208ENST00000469744 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
MRPL28-208ENST00000469744 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
MRPL28-208ENST00000469744 KRTAP16-1A8MUX0 517 aa9.62□□□□□ -0.87
MRPL28-208ENST00000469744 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
MRPL28-208ENST00000469744 KRTAP4-1Q9BYQ7 146 aa9.62□□□□□ -0.87
MRPL28-208ENST00000469744 XP32Q5T750 250 aa9.61□□□□□ -0.87
MRPL28-208ENST00000469744 SEC61BP60468 96 aaKnown RBP9.6□□□□□ -0.87
MRPL28-208ENST00000469744 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
MRPL28-208ENST00000469744 Q5W150 140 aa9.58□□□□□ -0.88
MRPL28-208ENST00000469744 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
MRPL28-208ENST00000469744 IGKV2-30P06310 120 aa9.46□□□□□ -0.9
MRPL28-208ENST00000469744 C4orf26Q17RF5 130 aa9.43□□□□□ -0.9
MRPL28-208ENST00000469744 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
MRPL28-208ENST00000469744 Q1T7F1 81 aa9.4□□□□□ -0.9
MRPL28-208ENST00000469744 COA5Q86WW8 74 aa9.38□□□□□ -0.91
MRPL28-208ENST00000469744 V9GYY9 64 aa9.38□□□□□ -0.91
MRPL28-208ENST00000469744 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
MRPL28-208ENST00000469744 A8MUU9 505 aa9.36□□□□□ -0.91
MRPL28-208ENST00000469744 HRES1P13985 223 aa9.34□□□□□ -0.91
MRPL28-208ENST00000469744 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
MRPL28-208ENST00000469744 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
MRPL28-208ENST00000469744 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
MRPL28-208ENST00000469744 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
MRPL28-208ENST00000469744 ACYP2P14621 99 aa9.31□□□□□ -0.92
MRPL28-208ENST00000469744 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
MRPL28-208ENST00000469744 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
MRPL28-208ENST00000469744 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
MRPL28-208ENST00000469744 MT1HP80294 61 aa9.23□□□□□ -0.93
MRPL28-208ENST00000469744 Q75L30 129 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms