RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NREPQ16612 68 aa10.01□□□□□ -0.81
RPL39-202ENST00000468844 Q5XG85 94 aa10.01□□□□□ -0.81
RPL39-202ENST00000468844 LIMD2Q9BT23 127 aa10□□□□□ -0.81
RPL39-202ENST00000468844 C20orf197Q8N268 126 aa9.98□□□□□ -0.81
RPL39-202ENST00000468844 HERC1Q15751 4861 aa9.98□□□□□ -0.81
RPL39-202ENST00000468844 RPS28P62857 69 aaKnown RBP9.97□□□□□ -0.81
RPL39-202ENST00000468844 J3KT08 172 aa9.96□□□□□ -0.81
RPL39-202ENST00000468844 J3QL48 77 aa9.96□□□□□ -0.81
RPL39-202ENST00000468844 ASB16-AS1Q495Z4 193 aa9.95□□□□□ -0.82
RPL39-202ENST00000468844 Q96NJ1 140 aa9.95□□□□□ -0.82
RPL39-202ENST00000468844 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
RPL39-202ENST00000468844 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
RPL39-202ENST00000468844 BPY2O14599 106 aa9.94□□□□□ -0.82
RPL39-202ENST00000468844 Q8N9L7 120 aa9.93□□□□□ -0.82
RPL39-202ENST00000468844 DEFB116Q30KQ4 102 aa9.92□□□□□ -0.82
RPL39-202ENST00000468844 KLKP1Q107X0 134 aa9.92□□□□□ -0.82
RPL39-202ENST00000468844 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
RPL39-202ENST00000468844 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.82
RPL39-202ENST00000468844 H7BZZ5 65 aa9.88□□□□□ -0.83
RPL39-202ENST00000468844 SVIPQ8NHG7 77 aa9.85□□□□□ -0.83
RPL39-202ENST00000468844 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
RPL39-202ENST00000468844 FAM236DA0A1B0GTK5 79 aa9.83□□□□□ -0.84
RPL39-202ENST00000468844 FAM236CP0DP71 79 aa9.83□□□□□ -0.84
RPL39-202ENST00000468844 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
RPL39-202ENST00000468844 DSCR10P59022 87 aa9.82□□□□□ -0.84
RPL39-202ENST00000468844 NDUFC1O43677 76 aa9.8□□□□□ -0.84
RPL39-202ENST00000468844 LPAP08519 4548 aa9.8□□□□□ -0.84
RPL39-202ENST00000468844 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
RPL39-202ENST00000468844 K7EQZ3 153 aa9.77□□□□□ -0.85
RPL39-202ENST00000468844 A8MWP4 228 aa9.76□□□□□ -0.85
RPL39-202ENST00000468844 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
RPL39-202ENST00000468844 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
RPL39-202ENST00000468844 SERP1Q9Y6X1 66 aa9.74□□□□□ -0.85
RPL39-202ENST00000468844 A0A0U1RQV1 116 aa9.73□□□□□ -0.85
RPL39-202ENST00000468844 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
RPL39-202ENST00000468844 NDUFB1O75438 58 aa9.72□□□□□ -0.85
RPL39-202ENST00000468844 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
RPL39-202ENST00000468844 LRP2P98164 4655 aa9.72□□□□□ -0.85
RPL39-202ENST00000468844 PRR4Q16378 134 aa9.72□□□□□ -0.85
RPL39-202ENST00000468844 IGHV6-1A0A0B4J1U7 121 aa9.71□□□□□ -0.86
RPL39-202ENST00000468844 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
RPL39-202ENST00000468844 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
RPL39-202ENST00000468844 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
RPL39-202ENST00000468844 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
RPL39-202ENST00000468844 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
RPL39-202ENST00000468844 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
RPL39-202ENST00000468844 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
RPL39-202ENST00000468844 LINC00313P59037 77 aa9.63□□□□□ -0.87
RPL39-202ENST00000468844 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
RPL39-202ENST00000468844 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
RPL39-202ENST00000468844 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
RPL39-202ENST00000468844 C5orf47Q569G3 176 aa9.59□□□□□ -0.87
RPL39-202ENST00000468844 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
RPL39-202ENST00000468844 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
RPL39-202ENST00000468844 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
RPL39-202ENST00000468844 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
RPL39-202ENST00000468844 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
RPL39-202ENST00000468844 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
RPL39-202ENST00000468844 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
RPL39-202ENST00000468844 XP32Q5T750 250 aa9.52□□□□□ -0.89
RPL39-202ENST00000468844 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
RPL39-202ENST00000468844 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
RPL39-202ENST00000468844 MP68P56378 58 aa9.46□□□□□ -0.89
RPL39-202ENST00000468844 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.89
RPL39-202ENST00000468844 A8MUU9 505 aa9.45□□□□□ -0.9
RPL39-202ENST00000468844 NDUFS5O43920 106 aa9.42□□□□□ -0.9
RPL39-202ENST00000468844 Q75L30 129 aa9.42□□□□□ -0.9
RPL39-202ENST00000468844 MUC17Q685J3 4493 aa9.42□□□□□ -0.9
RPL39-202ENST00000468844 H3BPC8 53 aa9.41□□□□□ -0.9
RPL39-202ENST00000468844 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
RPL39-202ENST00000468844 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
RPL39-202ENST00000468844 H0Y9P7 68 aa9.4□□□□□ -0.9
RPL39-202ENST00000468844 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
RPL39-202ENST00000468844 CYP4F30PQ9H0H9 118 aa9.4□□□□□ -0.9
RPL39-202ENST00000468844 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
RPL39-202ENST00000468844 C1orf64Q8NEQ6 169 aa9.38□□□□□ -0.91
RPL39-202ENST00000468844 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
RPL39-202ENST00000468844 TP53AIP1Q9HCN2 124 aa9.33□□□□□ -0.92
RPL39-202ENST00000468844 MUC2Q02817 5179 aa9.32□□□□□ -0.92
RPL39-202ENST00000468844 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
RPL39-202ENST00000468844 Q5W150 140 aa9.31□□□□□ -0.92
RPL39-202ENST00000468844 ATP11AUNQ6ZP68 121 aa9.29□□□□□ -0.92
RPL39-202ENST00000468844 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
RPL39-202ENST00000468844 Q1T7F1 81 aa9.25□□□□□ -0.93
RPL39-202ENST00000468844 SEC61BP60468 96 aaKnown RBP9.23□□□□□ -0.93
RPL39-202ENST00000468844 RNF213Q63HN8 5207 aa9.21□□□□□ -0.93
RPL39-202ENST00000468844 PRO0628Q9UI54 55 aa9.21□□□□□ -0.93
RPL39-202ENST00000468844 BRK1Q8WUW1 75 aa9.13□□□□□ -0.95
RPL39-202ENST00000468844 IGKV2D-30A0A075B6S6 120 aa9.12□□□□□ -0.95
RPL39-202ENST00000468844 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
RPL39-202ENST00000468844 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
RPL39-202ENST00000468844 V9GYY9 64 aa9.12□□□□□ -0.95
RPL39-202ENST00000468844 SPINK7P58062 85 aa9.1□□□□□ -0.95
RPL39-202ENST00000468844 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
RPL39-202ENST00000468844 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
RPL39-202ENST00000468844 PSPHP1O15172 72 aa9.08□□□□□ -0.96
RPL39-202ENST00000468844 COA5Q86WW8 74 aa9.08□□□□□ -0.96
RPL39-202ENST00000468844 A8MUN3 132 aa9.03□□□□□ -0.96
RPL39-202ENST00000468844 Q5VV11 94 aa8.99□□□□□ -0.97
RPL39-202ENST00000468844 HRES1P13985 223 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms