RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
PRPF3-202ENST00000467329 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
PRPF3-202ENST00000467329 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
PRPF3-202ENST00000467329 C8orf87E5RJ46 101 aa5.39□□□□□ -1.55
PRPF3-202ENST00000467329 KRTAP10-8P60410 259 aa5.39□□□□□ -1.55
PRPF3-202ENST00000467329 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
PRPF3-202ENST00000467329 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
PRPF3-202ENST00000467329 COX7CP15954 63 aa5.38□□□□□ -1.55
PRPF3-202ENST00000467329 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
PRPF3-202ENST00000467329 UQCRQO14949 82 aa5.38□□□□□ -1.55
PRPF3-202ENST00000467329 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
PRPF3-202ENST00000467329 IGHV6-1A0A0B4J1U7 121 aa5.36□□□□□ -1.55
PRPF3-202ENST00000467329 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
PRPF3-202ENST00000467329 WFDC13Q8IUB5 93 aa5.36□□□□□ -1.55
PRPF3-202ENST00000467329 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
PRPF3-202ENST00000467329 EPPK1P58107 5090 aaKnown RBP5.34□□□□□ -1.55
PRPF3-202ENST00000467329 OXTP01178 125 aa5.34□□□□□ -1.55
PRPF3-202ENST00000467329 KIAA1109Q2LD37 5005 aa5.33□□□□□ -1.56
PRPF3-202ENST00000467329 CCDC179H3BU77 68 aa5.32□□□□□ -1.56
PRPF3-202ENST00000467329 MRPL34Q9BQ48 92 aaKnown RBP5.32□□□□□ -1.56
PRPF3-202ENST00000467329 LINC00313P59037 77 aa5.31□□□□□ -1.56
PRPF3-202ENST00000467329 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
PRPF3-202ENST00000467329 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
PRPF3-202ENST00000467329 NOTCH2NLQ7Z3S9 236 aa5.3□□□□□ -1.56
PRPF3-202ENST00000467329 SEC61GP60059 68 aa5.29□□□□□ -1.56
PRPF3-202ENST00000467329 C5orf47Q569G3 176 aa5.29□□□□□ -1.56
PRPF3-202ENST00000467329 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
PRPF3-202ENST00000467329 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
PRPF3-202ENST00000467329 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
PRPF3-202ENST00000467329 KLKP1Q107X0 134 aa5.27□□□□□ -1.57
PRPF3-202ENST00000467329 BIRC6Q9NR09 4857 aa5.27□□□□□ -1.57
PRPF3-202ENST00000467329 H3BPC8 53 aa5.27□□□□□ -1.57
PRPF3-202ENST00000467329 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
PRPF3-202ENST00000467329 A0A0U1RQV1 116 aa5.26□□□□□ -1.57
PRPF3-202ENST00000467329 C20orf197Q8N268 126 aa5.26□□□□□ -1.57
PRPF3-202ENST00000467329 TNXBP22105 4242 aa5.26□□□□□ -1.57
PRPF3-202ENST00000467329 MP68P56378 58 aa5.25□□□□□ -1.57
PRPF3-202ENST00000467329 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
PRPF3-202ENST00000467329 NDUFC1O43677 76 aa5.24□□□□□ -1.57
PRPF3-202ENST00000467329 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
PRPF3-202ENST00000467329 TRAV22A0A0B4J277 110 aa5.23□□□□□ -1.57
PRPF3-202ENST00000467329 NDUFS5O43920 106 aa5.23□□□□□ -1.57
PRPF3-202ENST00000467329 H0Y9P7 68 aa5.23□□□□□ -1.57
PRPF3-202ENST00000467329 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
PRPF3-202ENST00000467329 RETNLBQ9BQ08 111 aa5.21□□□□□ -1.57
PRPF3-202ENST00000467329 HERC2O95714 4834 aa5.21□□□□□ -1.57
PRPF3-202ENST00000467329 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
PRPF3-202ENST00000467329 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
PRPF3-202ENST00000467329 SNURFQ9Y675 71 aa5.2□□□□□ -1.58
PRPF3-202ENST00000467329 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
PRPF3-202ENST00000467329 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
PRPF3-202ENST00000467329 A8MUU9 505 aa5.18□□□□□ -1.58
PRPF3-202ENST00000467329 TMEM258P61165 79 aa5.18□□□□□ -1.58
PRPF3-202ENST00000467329 H7BZZ5 65 aa5.18□□□□□ -1.58
PRPF3-202ENST00000467329 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
PRPF3-202ENST00000467329 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
PRPF3-202ENST00000467329 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
PRPF3-202ENST00000467329 C1orf64Q8NEQ6 169 aa5.17□□□□□ -1.58
PRPF3-202ENST00000467329 Q5W150 140 aa5.16□□□□□ -1.58
PRPF3-202ENST00000467329 C9orf92A6NGG3 77 aa5.15□□□□□ -1.58
PRPF3-202ENST00000467329 Q75L30 129 aa5.15□□□□□ -1.59
PRPF3-202ENST00000467329 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
PRPF3-202ENST00000467329 FAM236DA0A1B0GTK5 79 aa5.11□□□□□ -1.59
PRPF3-202ENST00000467329 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
PRPF3-202ENST00000467329 FAM236CP0DP71 79 aa5.11□□□□□ -1.59
PRPF3-202ENST00000467329 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
PRPF3-202ENST00000467329 SPANXA2-OT1Q8N9U9 137 aa5.1□□□□□ -1.59
PRPF3-202ENST00000467329 PRR4Q16378 134 aa5.1□□□□□ -1.59
PRPF3-202ENST00000467329 CYP4F30PQ9H0H9 118 aa5.1□□□□□ -1.59
PRPF3-202ENST00000467329 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
PRPF3-202ENST00000467329 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
PRPF3-202ENST00000467329 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.6
PRPF3-202ENST00000467329 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.6
PRPF3-202ENST00000467329 XP32Q5T750 250 aa5.08□□□□□ -1.6
PRPF3-202ENST00000467329 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
PRPF3-202ENST00000467329 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
PRPF3-202ENST00000467329 ATP11AUNQ6ZP68 121 aa5.04□□□□□ -1.6
PRPF3-202ENST00000467329 V9GYY9 64 aa5.04□□□□□ -1.6
PRPF3-202ENST00000467329 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
PRPF3-202ENST00000467329 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
PRPF3-202ENST00000467329 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
PRPF3-202ENST00000467329 HRES1P13985 223 aa5□□□□□ -1.61
PRPF3-202ENST00000467329 SPINK7P58062 85 aa4.98□□□□□ -1.61
PRPF3-202ENST00000467329 DMAC1Q96GE9 116 aa4.97□□□□□ -1.61
PRPF3-202ENST00000467329 A8MUN3 132 aa4.94□□□□□ -1.62
PRPF3-202ENST00000467329 LCE2BO14633 110 aa4.93□□□□□ -1.62
PRPF3-202ENST00000467329 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
PRPF3-202ENST00000467329 ACYP2P14621 99 aa4.93□□□□□ -1.62
PRPF3-202ENST00000467329 H3BS24 57 aa4.92□□□□□ -1.62
PRPF3-202ENST00000467329 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
PRPF3-202ENST00000467329 COA5Q86WW8 74 aa4.91□□□□□ -1.62
PRPF3-202ENST00000467329 SMIM26A0A096LP01 95 aa4.89□□□□□ -1.63
PRPF3-202ENST00000467329 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
PRPF3-202ENST00000467329 C4orf26Q17RF5 130 aa4.88□□□□□ -1.63
PRPF3-202ENST00000467329 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
PRPF3-202ENST00000467329 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
PRPF3-202ENST00000467329 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
PRPF3-202ENST00000467329 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
PRPF3-202ENST00000467329 CHKB-CPT1BH3BT56 60 aa4.83□□□□□ -1.64
PRPF3-202ENST00000467329 LRP2P98164 4655 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms