RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 KRTAP10-2P60368 255 aa8.78□□□□□ -1
PRPF38B-204ENST00000467302 HYDINQ4G0P3 5121 aa8.78□□□□□ -1
PRPF38B-204ENST00000467302 A0A1B0GVX0 72 aa8.78□□□□□ -1
PRPF38B-204ENST00000467302 Q5VV11 94 aa8.78□□□□□ -1
PRPF38B-204ENST00000467302 SEC61GP60059 68 aa8.76□□□□□ -1.01
PRPF38B-204ENST00000467302 IGHV6-1A0A0B4J1U7 121 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 ZNF861PO60384 105 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 CD164Q04900 197 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 COA5Q86WW8 74 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
PRPF38B-204ENST00000467302 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
PRPF38B-204ENST00000467302 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
PRPF38B-204ENST00000467302 PKD1P98161 4303 aa8.71□□□□□ -1.01
PRPF38B-204ENST00000467302 CIRBP-AS1Q8TBR5 109 aa8.71□□□□□ -1.01
PRPF38B-204ENST00000467302 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.01
PRPF38B-204ENST00000467302 A0A087X002 238 aa8.71□□□□□ -1.02
PRPF38B-204ENST00000467302 Q6ZSA8 131 aa8.71□□□□□ -1.02
PRPF38B-204ENST00000467302 NOTCH2NLQ7Z3S9 236 aa8.71□□□□□ -1.02
PRPF38B-204ENST00000467302 CDK2AP2O75956 126 aa8.7□□□□□ -1.02
PRPF38B-204ENST00000467302 NDUFS5O43920 106 aa8.7□□□□□ -1.02
PRPF38B-204ENST00000467302 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
PRPF38B-204ENST00000467302 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
PRPF38B-204ENST00000467302 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
PRPF38B-204ENST00000467302 SACSQ9NZJ4 4579 aa8.67□□□□□ -1.02
PRPF38B-204ENST00000467302 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
PRPF38B-204ENST00000467302 A8MU10 97 aa8.66□□□□□ -1.02
PRPF38B-204ENST00000467302 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
PRPF38B-204ENST00000467302 Q75L30 129 aa8.64□□□□□ -1.03
PRPF38B-204ENST00000467302 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
PRPF38B-204ENST00000467302 HRES1P13985 223 aa8.61□□□□□ -1.03
PRPF38B-204ENST00000467302 Q5W150 140 aa8.59□□□□□ -1.03
PRPF38B-204ENST00000467302 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
PRPF38B-204ENST00000467302 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
PRPF38B-204ENST00000467302 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
PRPF38B-204ENST00000467302 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
PRPF38B-204ENST00000467302 LCA10Q71F78 164 aa8.56□□□□□ -1.04
PRPF38B-204ENST00000467302 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
PRPF38B-204ENST00000467302 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
PRPF38B-204ENST00000467302 A6NED7 52 aa8.53□□□□□ -1.04
PRPF38B-204ENST00000467302 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
PRPF38B-204ENST00000467302 RYR2Q92736 4967 aa8.49□□□□□ -1.05
PRPF38B-204ENST00000467302 ATP11AUNQ6ZP68 121 aa8.49□□□□□ -1.05
PRPF38B-204ENST00000467302 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
PRPF38B-204ENST00000467302 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
PRPF38B-204ENST00000467302 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
PRPF38B-204ENST00000467302 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
PRPF38B-204ENST00000467302 LINC00313P59037 77 aa8.45□□□□□ -1.06
PRPF38B-204ENST00000467302 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
PRPF38B-204ENST00000467302 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
PRPF38B-204ENST00000467302 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
PRPF38B-204ENST00000467302 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
PRPF38B-204ENST00000467302 ACYP2P14621 99 aa8.44□□□□□ -1.06
PRPF38B-204ENST00000467302 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
PRPF38B-204ENST00000467302 SPINK7P58062 85 aa8.42□□□□□ -1.06
PRPF38B-204ENST00000467302 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
PRPF38B-204ENST00000467302 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
PRPF38B-204ENST00000467302 A6NN06 94 aa8.39□□□□□ -1.07
PRPF38B-204ENST00000467302 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
PRPF38B-204ENST00000467302 IGKV2-30P06310 120 aa8.38□□□□□ -1.07
PRPF38B-204ENST00000467302 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
PRPF38B-204ENST00000467302 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
PRPF38B-204ENST00000467302 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
PRPF38B-204ENST00000467302 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
PRPF38B-204ENST00000467302 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
PRPF38B-204ENST00000467302 SMR3BP02814 79 aaPredicted RBP8.34□□□□□ -1.07
PRPF38B-204ENST00000467302 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
PRPF38B-204ENST00000467302 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
PRPF38B-204ENST00000467302 KRTAP10-4P60372 401 aaPredicted RBP8.26□□□□□ -1.09
PRPF38B-204ENST00000467302 SPINK1P00995 79 aa8.25□□□□□ -1.09
PRPF38B-204ENST00000467302 FAT1Q14517 4588 aa8.23□□□□□ -1.09
PRPF38B-204ENST00000467302 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
PRPF38B-204ENST00000467302 A0A1B0GU69 56 aa8.22□□□□□ -1.09
PRPF38B-204ENST00000467302 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
PRPF38B-204ENST00000467302 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
PRPF38B-204ENST00000467302 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
PRPF38B-204ENST00000467302 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
PRPF38B-204ENST00000467302 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
PRPF38B-204ENST00000467302 RYR3Q15413 4870 aa8.17□□□□□ -1.1
PRPF38B-204ENST00000467302 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
PRPF38B-204ENST00000467302 UQCR11O14957 56 aa8.1□□□□□ -1.11
PRPF38B-204ENST00000467302 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
PRPF38B-204ENST00000467302 HSPG2P98160 4391 aa8.08□□□□□ -1.12
PRPF38B-204ENST00000467302 RYR1P21817 5038 aa8.06□□□□□ -1.12
PRPF38B-204ENST00000467302 Q5VSD8 79 aa8.06□□□□□ -1.12
PRPF38B-204ENST00000467302 Q8N1X5 172 aa8.04□□□□□ -1.12
PRPF38B-204ENST00000467302 A8MUU9 505 aa7.98□□□□□ -1.13
PRPF38B-204ENST00000467302 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
PRPF38B-204ENST00000467302 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
PRPF38B-204ENST00000467302 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.14
PRPF38B-204ENST00000467302 TNXBP22105 4242 aa7.96□□□□□ -1.14
PRPF38B-204ENST00000467302 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
PRPF38B-204ENST00000467302 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
PRPF38B-204ENST00000467302 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
PRPF38B-204ENST00000467302 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.15
PRPF38B-204ENST00000467302 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
PRPF38B-204ENST00000467302 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-204ENST00000467302 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
PRPF38B-204ENST00000467302 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
PRPF38B-204ENST00000467302 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms