RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 Q1T7F1 81 aa6.77□□□□□ -1.33
HPS1-208ENST00000467246 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
HPS1-208ENST00000467246 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
HPS1-208ENST00000467246 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
HPS1-208ENST00000467246 NDUFB1O75438 58 aa6.76□□□□□ -1.33
HPS1-208ENST00000467246 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
HPS1-208ENST00000467246 MP68P56378 58 aa6.73□□□□□ -1.33
HPS1-208ENST00000467246 Q5VV11 94 aa6.73□□□□□ -1.33
HPS1-208ENST00000467246 SACSQ9NZJ4 4579 aa6.72□□□□□ -1.33
HPS1-208ENST00000467246 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
HPS1-208ENST00000467246 PKHD1P08F94 4074 aa6.71□□□□□ -1.33
HPS1-208ENST00000467246 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
HPS1-208ENST00000467246 A0A087X002 238 aa6.71□□□□□ -1.34
HPS1-208ENST00000467246 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
HPS1-208ENST00000467246 A0A1B0GVX0 72 aa6.7□□□□□ -1.34
HPS1-208ENST00000467246 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
HPS1-208ENST00000467246 H0Y9P7 68 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 SPINK6Q6UWN8 80 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 SSBP3-AS1Q7Z2R9 100 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 CYP4F30PQ9H0H9 118 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
HPS1-208ENST00000467246 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
HPS1-208ENST00000467246 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
HPS1-208ENST00000467246 CD164Q04900 197 aa6.66□□□□□ -1.34
HPS1-208ENST00000467246 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
HPS1-208ENST00000467246 LCA10Q71F78 164 aa6.66□□□□□ -1.34
HPS1-208ENST00000467246 KRTAP1-4P0C5Y4 121 aa6.64□□□□□ -1.35
HPS1-208ENST00000467246 A6NED7 52 aa6.63□□□□□ -1.35
HPS1-208ENST00000467246 NDUFS5O43920 106 aa6.63□□□□□ -1.35
HPS1-208ENST00000467246 H3BPC8 53 aa6.63□□□□□ -1.35
HPS1-208ENST00000467246 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
HPS1-208ENST00000467246 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
HPS1-208ENST00000467246 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
HPS1-208ENST00000467246 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
HPS1-208ENST00000467246 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
HPS1-208ENST00000467246 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
HPS1-208ENST00000467246 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
HPS1-208ENST00000467246 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
HPS1-208ENST00000467246 COA5Q86WW8 74 aa6.58□□□□□ -1.36
HPS1-208ENST00000467246 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
HPS1-208ENST00000467246 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
HPS1-208ENST00000467246 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
HPS1-208ENST00000467246 Q5W150 140 aa6.54□□□□□ -1.36
HPS1-208ENST00000467246 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
HPS1-208ENST00000467246 TYMSOSQ8TAI1 123 aa6.54□□□□□ -1.36
HPS1-208ENST00000467246 SPINK7P58062 85 aa6.53□□□□□ -1.36
HPS1-208ENST00000467246 RYR2Q92736 4967 aa6.53□□□□□ -1.36
HPS1-208ENST00000467246 FAT1Q14517 4588 aa6.53□□□□□ -1.36
HPS1-208ENST00000467246 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
HPS1-208ENST00000467246 LINC00313P59037 77 aa6.52□□□□□ -1.37
HPS1-208ENST00000467246 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
HPS1-208ENST00000467246 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
HPS1-208ENST00000467246 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
HPS1-208ENST00000467246 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
HPS1-208ENST00000467246 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
HPS1-208ENST00000467246 A6NN06 94 aa6.49□□□□□ -1.37
HPS1-208ENST00000467246 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
HPS1-208ENST00000467246 Q75L30 129 aa6.48□□□□□ -1.37
HPS1-208ENST00000467246 SPINK1P00995 79 aa6.47□□□□□ -1.37
HPS1-208ENST00000467246 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
HPS1-208ENST00000467246 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.37
HPS1-208ENST00000467246 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.37
HPS1-208ENST00000467246 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.38
HPS1-208ENST00000467246 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
HPS1-208ENST00000467246 RETNLBQ9BQ08 111 aa6.46□□□□□ -1.38
HPS1-208ENST00000467246 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
HPS1-208ENST00000467246 HRES1P13985 223 aa6.44□□□□□ -1.38
HPS1-208ENST00000467246 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
HPS1-208ENST00000467246 RYR3Q15413 4870 aa6.42□□□□□ -1.38
HPS1-208ENST00000467246 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
HPS1-208ENST00000467246 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
HPS1-208ENST00000467246 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
HPS1-208ENST00000467246 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
HPS1-208ENST00000467246 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
HPS1-208ENST00000467246 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
HPS1-208ENST00000467246 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
HPS1-208ENST00000467246 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
HPS1-208ENST00000467246 HSPG2P98160 4391 aa6.29□□□□□ -1.4
HPS1-208ENST00000467246 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
HPS1-208ENST00000467246 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
HPS1-208ENST00000467246 ACYP2P14621 99 aa6.27□□□□□ -1.41
HPS1-208ENST00000467246 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
HPS1-208ENST00000467246 Q5VSD8 79 aa6.24□□□□□ -1.41
HPS1-208ENST00000467246 Q8N1X5 172 aa6.23□□□□□ -1.41
HPS1-208ENST00000467246 TNXBP22105 4242 aa6.23□□□□□ -1.41
HPS1-208ENST00000467246 EPPK1P58107 5090 aaKnown RBP6.22□□□□□ -1.41
HPS1-208ENST00000467246 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
HPS1-208ENST00000467246 RYR1P21817 5038 aa6.21□□□□□ -1.41
HPS1-208ENST00000467246 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
HPS1-208ENST00000467246 A8MUU9 505 aa6.21□□□□□ -1.42
HPS1-208ENST00000467246 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
HPS1-208ENST00000467246 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
HPS1-208ENST00000467246 A0A1B0GU69 56 aa6.18□□□□□ -1.42
HPS1-208ENST00000467246 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
HPS1-208ENST00000467246 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
HPS1-208ENST00000467246 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
HPS1-208ENST00000467246 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
HPS1-208ENST00000467246 H3BS24 57 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms