RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ABCA2Q9BZC7 2435 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 ASH1LQ9NR48 2969 aaKnown RBP1.51□□□□□ -2.17
VPS13D-203ENST00000466732 WDFY3Q8IZQ1 3526 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 SPTBN4Q9H254 2564 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 PRLHP81277 87 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 DEFB123Q8N688 67 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 DMXL2Q8TDJ6 3036 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 OTOGQ6ZRI0 2925 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 VCANP13611 3396 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 WDFY4Q6ZS81 3184 aa1.51□□□□□ -2.17
VPS13D-203ENST00000466732 HRNRQ86YZ3 2850 aaPredicted RBP1.5□□□□□ -2.17
VPS13D-203ENST00000466732 H3BNG1 76 aa1.5□□□□□ -2.17
VPS13D-203ENST00000466732 BOD1L1Q8NFC6 3051 aa1.5□□□□□ -2.17
VPS13D-203ENST00000466732 TLN1Q9Y490 2541 aaKnown RBP1.49□□□□□ -2.17
VPS13D-203ENST00000466732 APCP25054 2843 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 MYO15AQ9UKN7 3530 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 SPENQ96T58 3664 aaKnown RBP1.49□□□□□ -2.17
VPS13D-203ENST00000466732 DEFB136Q30KP8 78 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 UTP20O75691 2785 aaKnown RBP1.49□□□□□ -2.17
VPS13D-203ENST00000466732 SETXQ7Z333 2677 aaKnown RBP1.49□□□□□ -2.17
VPS13D-203ENST00000466732 DCHS2Q6V1P9 2916 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 CSPG4Q6UVK1 2322 aa1.49□□□□□ -2.17
VPS13D-203ENST00000466732 BDP1A6H8Y1 2624 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 SPINK1P00995 79 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 TLN2Q9Y4G6 2542 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 SPTAN1Q13813 2472 aaKnown RBP1.48□□□□□ -2.17
VPS13D-203ENST00000466732 RIF1Q5UIP0 2472 aaKnown RBP1.48□□□□□ -2.17
VPS13D-203ENST00000466732 GVINP1Q7Z2Y8 2422 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 ZFHX4Q86UP3 3567 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 CELSR3Q9NYQ7 3312 aa1.48□□□□□ -2.17
VPS13D-203ENST00000466732 SMG1Q96Q15 3661 aaKnown RBP1.47□□□□□ -2.17
VPS13D-203ENST00000466732 ANKRD11Q6UB99 2663 aaPredicted RBP1.47□□□□□ -2.17
VPS13D-203ENST00000466732 SPG11Q96JI7 2443 aa1.47□□□□□ -2.17
VPS13D-203ENST00000466732 AKAP9Q99996 3911 aa1.47□□□□□ -2.17
VPS13D-203ENST00000466732 UBR5O95071 2799 aaPredicted RBP1.47□□□□□ -2.17
VPS13D-203ENST00000466732 MYO9AB2RTY4 2548 aa1.46□□□□□ -2.18
VPS13D-203ENST00000466732 LINC01556Q5JQF7 62 aa1.46□□□□□ -2.18
VPS13D-203ENST00000466732 DCHS1Q96JQ0 3298 aa1.46□□□□□ -2.18
VPS13D-203ENST00000466732 ADGRG4Q8IZF6 3080 aa1.46□□□□□ -2.18
VPS13D-203ENST00000466732 NBASA2RRP1 2371 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 NF1P21359 2839 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 ATMQ13315 3056 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 FAM208BQ5VWN6 2430 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 A0A096LPF7 62 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 DEFB124Q8NES8 71 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 S4R3F8 94 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 CELSR1Q9NYQ6 3014 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 JMJD1CQ15652 2540 aa1.45□□□□□ -2.18
VPS13D-203ENST00000466732 GCN1Q92616 2671 aaKnown RBP1.45□□□□□ -2.18
VPS13D-203ENST00000466732 NBPF19A0A087WUL8 3843 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 TEX15Q9BXT5 2789 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 SPART-AS1P0CW21 52 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 APLNQ9ULZ1 77 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 DMXL1Q9Y485 3027 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 SPEGQ15772 3267 aa1.44□□□□□ -2.18
VPS13D-203ENST00000466732 COL12A1Q99715 3063 aa1.43□□□□□ -2.18
VPS13D-203ENST00000466732 CSMD1Q96PZ7 3565 aa1.43□□□□□ -2.18
VPS13D-203ENST00000466732 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
VPS13D-203ENST00000466732 KRTAP4-1Q9BYQ7 146 aa1.43□□□□□ -2.18
VPS13D-203ENST00000466732 CEP295Q9C0D2 2601 aa1.43□□□□□ -2.18
VPS13D-203ENST00000466732 LOC400499M0QZD8 3231 aa1.42□□□□□ -2.18
VPS13D-203ENST00000466732 MUC3AQ02505 3323 aa1.42□□□□□ -2.18
VPS13D-203ENST00000466732 ZNF292O60281 2723 aa1.42□□□□□ -2.18
VPS13D-203ENST00000466732 VWFP04275 2813 aa1.42□□□□□ -2.18
VPS13D-203ENST00000466732 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
VPS13D-203ENST00000466732 USP9XQ93008 2570 aaPredicted RBP1.42□□□□□ -2.18
VPS13D-203ENST00000466732 MXRA5Q9NR99 2828 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 J3QKU1 62 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 CRYBG3Q68DQ2 2970 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 LAMA5O15230 3695 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 PTPN13Q12923 2485 aa1.41□□□□□ -2.18
VPS13D-203ENST00000466732 A0A096LNI7 61 aa1.4□□□□□ -2.19
VPS13D-203ENST00000466732 A0A0D9SG42 100 aa1.4□□□□□ -2.19
VPS13D-203ENST00000466732 CENPEQ02224 2701 aa1.4□□□□□ -2.19
VPS13D-203ENST00000466732 ZFYVE26Q68DK2 2539 aa1.4□□□□□ -2.19
VPS13D-203ENST00000466732 CFAP46Q8IYW2 2715 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 BSNQ9UPA5 3926 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 NIPBLQ6KC79 2804 aaeCLIP1.39□□□□□ -2.19
VPS13D-203ENST00000466732 MTORP42345 2549 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 ZNF462Q96JM2 2506 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 MUC6Q6W4X9 2439 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 NBEAL2Q6ZNJ1 2754 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 TTC28Q96AY4 2481 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 MEGF8Q7Z7M0 2845 aa1.39□□□□□ -2.19
VPS13D-203ENST00000466732 UNC79Q9P2D8 2635 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 DEFB135Q30KP9 77 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 SPINK6Q6UWN8 80 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 F8P00451 2351 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 BAHCC1Q9P281 2608 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 PIEZO1Q92508 2521 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 CCDC168Q8NDH2 2452 aa1.38□□□□□ -2.19
VPS13D-203ENST00000466732 HIVEP3Q5T1R4 2406 aa1.37□□□□□ -2.19
VPS13D-203ENST00000466732 EPG5Q9HCE0 2579 aa1.37□□□□□ -2.19
VPS13D-203ENST00000466732 HTN3P15516 51 aa1.37□□□□□ -2.19
VPS13D-203ENST00000466732 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
VPS13D-203ENST00000466732 HIVEP1P15822 2718 aa1.37□□□□□ -2.19
VPS13D-203ENST00000466732 RELNP78509 3460 aa1.36□□□□□ -2.19
VPS13D-203ENST00000466732 HECTD1Q9ULT8 2610 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms