RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LINC00313P59037 77 aa7.78□□□□□ -1.16
DNMT3A-208ENST00000466601 A0A1B0GV90 55 aa7.77□□□□□ -1.17
DNMT3A-208ENST00000466601 A0A1B0GVX0 72 aa7.77□□□□□ -1.17
DNMT3A-208ENST00000466601 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
DNMT3A-208ENST00000466601 NDUFB1O75438 58 aa7.75□□□□□ -1.17
DNMT3A-208ENST00000466601 Q75L30 129 aa7.75□□□□□ -1.17
DNMT3A-208ENST00000466601 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
DNMT3A-208ENST00000466601 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
DNMT3A-208ENST00000466601 A8MWP4 228 aa7.73□□□□□ -1.17
DNMT3A-208ENST00000466601 Q6ZVQ6 151 aa7.73□□□□□ -1.17
DNMT3A-208ENST00000466601 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
DNMT3A-208ENST00000466601 MUC2Q02817 5179 aa7.72□□□□□ -1.17
DNMT3A-208ENST00000466601 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.18
DNMT3A-208ENST00000466601 A8MUU9 505 aa7.71□□□□□ -1.18
DNMT3A-208ENST00000466601 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
DNMT3A-208ENST00000466601 KRTAP4-1Q9BYQ7 146 aa7.71□□□□□ -1.18
DNMT3A-208ENST00000466601 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
DNMT3A-208ENST00000466601 BPY2O14599 106 aa7.7□□□□□ -1.18
DNMT3A-208ENST00000466601 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
DNMT3A-208ENST00000466601 UBL5Q9BZL1 73 aa7.69□□□□□ -1.18
DNMT3A-208ENST00000466601 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
DNMT3A-208ENST00000466601 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
DNMT3A-208ENST00000466601 K7EQZ3 153 aa7.64□□□□□ -1.19
DNMT3A-208ENST00000466601 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
DNMT3A-208ENST00000466601 MMP24-AS1A0A0U1RRL7 71 aa7.6□□□□□ -1.19
DNMT3A-208ENST00000466601 ACYP1P07311 99 aa7.6□□□□□ -1.19
DNMT3A-208ENST00000466601 Q8N9L7 120 aa7.59□□□□□ -1.19
DNMT3A-208ENST00000466601 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
DNMT3A-208ENST00000466601 FAM240AA0A1B0GVK7 77 aa7.57□□□□□ -1.2
DNMT3A-208ENST00000466601 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
DNMT3A-208ENST00000466601 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
DNMT3A-208ENST00000466601 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
DNMT3A-208ENST00000466601 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
DNMT3A-208ENST00000466601 CXCL6P80162 114 aa7.54□□□□□ -1.2
DNMT3A-208ENST00000466601 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
DNMT3A-208ENST00000466601 CASC2Q6XLA1 102 aa7.52□□□□□ -1.21
DNMT3A-208ENST00000466601 WFDC13Q8IUB5 93 aa7.52□□□□□ -1.21
DNMT3A-208ENST00000466601 NDUFS5O43920 106 aa7.49□□□□□ -1.21
DNMT3A-208ENST00000466601 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
DNMT3A-208ENST00000466601 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
DNMT3A-208ENST00000466601 J3QR89 54 aa7.46□□□□□ -1.22
DNMT3A-208ENST00000466601 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.22
DNMT3A-208ENST00000466601 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
DNMT3A-208ENST00000466601 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
DNMT3A-208ENST00000466601 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
DNMT3A-208ENST00000466601 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
DNMT3A-208ENST00000466601 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
DNMT3A-208ENST00000466601 SPINK7P58062 85 aa7.4□□□□□ -1.22
DNMT3A-208ENST00000466601 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
DNMT3A-208ENST00000466601 HRES1P13985 223 aa7.38□□□□□ -1.23
DNMT3A-208ENST00000466601 Q5W150 140 aa7.38□□□□□ -1.23
DNMT3A-208ENST00000466601 RBM12B-AS1Q9P1G2 102 aa7.34□□□□□ -1.23
DNMT3A-208ENST00000466601 MT1HP80294 61 aa7.33□□□□□ -1.24
DNMT3A-208ENST00000466601 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
DNMT3A-208ENST00000466601 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
DNMT3A-208ENST00000466601 A0A087WVE0 104 aa7.31□□□□□ -1.24
DNMT3A-208ENST00000466601 K7ERU9 68 aa7.31□□□□□ -1.24
DNMT3A-208ENST00000466601 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
DNMT3A-208ENST00000466601 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
DNMT3A-208ENST00000466601 FAM236DA0A1B0GTK5 79 aa7.3□□□□□ -1.24
DNMT3A-208ENST00000466601 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
DNMT3A-208ENST00000466601 FAM236CP0DP71 79 aa7.3□□□□□ -1.24
DNMT3A-208ENST00000466601 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
DNMT3A-208ENST00000466601 M0R2T5 61 aa7.24□□□□□ -1.25
DNMT3A-208ENST00000466601 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
DNMT3A-208ENST00000466601 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
DNMT3A-208ENST00000466601 UQCRQO14949 82 aa7.2□□□□□ -1.26
DNMT3A-208ENST00000466601 MT-ATP8P03928 68 aa7.18□□□□□ -1.26
DNMT3A-208ENST00000466601 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
DNMT3A-208ENST00000466601 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
DNMT3A-208ENST00000466601 H0Y9P7 68 aa7.14□□□□□ -1.27
DNMT3A-208ENST00000466601 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
DNMT3A-208ENST00000466601 LOC101927531A0A1B0GV80 90 aa7.13□□□□□ -1.27
DNMT3A-208ENST00000466601 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
DNMT3A-208ENST00000466601 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
DNMT3A-208ENST00000466601 ATOX1O00244 68 aa7.12□□□□□ -1.27
DNMT3A-208ENST00000466601 SCGB1A1P11684 91 aa7.12□□□□□ -1.27
DNMT3A-208ENST00000466601 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
DNMT3A-208ENST00000466601 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
DNMT3A-208ENST00000466601 MP68P56378 58 aa7.07□□□□□ -1.28
DNMT3A-208ENST00000466601 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
DNMT3A-208ENST00000466601 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
DNMT3A-208ENST00000466601 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
DNMT3A-208ENST00000466601 FAM236AA0A1B0GUQ0 79 aa7.04□□□□□ -1.28
DNMT3A-208ENST00000466601 FAM236BA0A1B0GV22 79 aa7.04□□□□□ -1.28
DNMT3A-208ENST00000466601 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
DNMT3A-208ENST00000466601 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
DNMT3A-208ENST00000466601 H3BPC8 53 aa7□□□□□ -1.29
DNMT3A-208ENST00000466601 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
DNMT3A-208ENST00000466601 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
DNMT3A-208ENST00000466601 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
DNMT3A-208ENST00000466601 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
DNMT3A-208ENST00000466601 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
DNMT3A-208ENST00000466601 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
DNMT3A-208ENST00000466601 S4R3F8 94 aa6.93□□□□□ -1.3
DNMT3A-208ENST00000466601 MT2AP02795 61 aa6.92□□□□□ -1.3
DNMT3A-208ENST00000466601 LCA10Q71F78 164 aa6.89□□□□□ -1.31
DNMT3A-208ENST00000466601 MT1FP04733 61 aa6.87□□□□□ -1.31
DNMT3A-208ENST00000466601 A8MUN3 132 aa6.86□□□□□ -1.31
DNMT3A-208ENST00000466601 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms