RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
CDHR3-204ENST00000466351 MRPL34Q9BQ48 92 aaKnown RBP4.09□□□□□ -1.75
CDHR3-204ENST00000466351 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
CDHR3-204ENST00000466351 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
CDHR3-204ENST00000466351 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
CDHR3-204ENST00000466351 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
CDHR3-204ENST00000466351 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
CDHR3-204ENST00000466351 LOC101927531A0A1B0GV80 90 aa4.07□□□□□ -1.76
CDHR3-204ENST00000466351 H3BS24 57 aa4.07□□□□□ -1.76
CDHR3-204ENST00000466351 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
CDHR3-204ENST00000466351 LYSTQ99698 3801 aa4.06□□□□□ -1.76
CDHR3-204ENST00000466351 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
CDHR3-204ENST00000466351 LINC00336Q6ZUF6 198 aa4.05□□□□□ -1.76
CDHR3-204ENST00000466351 HECTD4Q9Y4D8 3996 aa4.04□□□□□ -1.76
CDHR3-204ENST00000466351 PLECQ15149 4684 aaKnown RBP4.04□□□□□ -1.76
CDHR3-204ENST00000466351 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
CDHR3-204ENST00000466351 TGP01266 2768 aa4.03□□□□□ -1.76
CDHR3-204ENST00000466351 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
CDHR3-204ENST00000466351 IGHV6-1A0A0B4J1U7 121 aa4.03□□□□□ -1.76
CDHR3-204ENST00000466351 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
CDHR3-204ENST00000466351 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
CDHR3-204ENST00000466351 MPLKIPQ8TAP9 179 aa4.02□□□□□ -1.77
CDHR3-204ENST00000466351 CIRBP-AS1Q8TBR5 109 aa4.02□□□□□ -1.77
CDHR3-204ENST00000466351 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
CDHR3-204ENST00000466351 LY6G6CO95867 125 aa4.01□□□□□ -1.77
CDHR3-204ENST00000466351 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
CDHR3-204ENST00000466351 COA5Q86WW8 74 aa4□□□□□ -1.77
CDHR3-204ENST00000466351 NDUFS5O43920 106 aa3.98□□□□□ -1.77
CDHR3-204ENST00000466351 Q75L30 129 aa3.98□□□□□ -1.77
CDHR3-204ENST00000466351 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
CDHR3-204ENST00000466351 ALMS1Q8TCU4 4167 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 SPINK1P00995 79 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 LINC00313P59037 77 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 KRTAP10-2P60368 255 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
CDHR3-204ENST00000466351 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
CDHR3-204ENST00000466351 PRR4Q16378 134 aa3.96□□□□□ -1.78
CDHR3-204ENST00000466351 KRTAP13-2Q52LG2 175 aa3.96□□□□□ -1.78
CDHR3-204ENST00000466351 PRR26Q8N8Z3 221 aa3.96□□□□□ -1.78
CDHR3-204ENST00000466351 Q5VV11 94 aa3.95□□□□□ -1.78
CDHR3-204ENST00000466351 SPAG11AQ6PDA7 123 aa3.95□□□□□ -1.78
CDHR3-204ENST00000466351 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
CDHR3-204ENST00000466351 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
CDHR3-204ENST00000466351 A0A087X002 238 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 ACYP2P14621 99 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
CDHR3-204ENST00000466351 A8MUN3 132 aa3.93□□□□□ -1.78
CDHR3-204ENST00000466351 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
CDHR3-204ENST00000466351 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
CDHR3-204ENST00000466351 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
CDHR3-204ENST00000466351 PSPHP1O15172 72 aa3.92□□□□□ -1.78
CDHR3-204ENST00000466351 HRES1P13985 223 aa3.92□□□□□ -1.78
CDHR3-204ENST00000466351 Q5W150 140 aa3.92□□□□□ -1.78
CDHR3-204ENST00000466351 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
CDHR3-204ENST00000466351 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
CDHR3-204ENST00000466351 TYMSOSQ8TAI1 123 aa3.9□□□□□ -1.79
CDHR3-204ENST00000466351 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
CDHR3-204ENST00000466351 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
CDHR3-204ENST00000466351 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
CDHR3-204ENST00000466351 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
CDHR3-204ENST00000466351 ATP11AUNQ6ZP68 121 aa3.89□□□□□ -1.79
CDHR3-204ENST00000466351 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
CDHR3-204ENST00000466351 PLA2G1BP04054 148 aaKnown RBP3.88□□□□□ -1.79
CDHR3-204ENST00000466351 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
CDHR3-204ENST00000466351 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
CDHR3-204ENST00000466351 A6NED7 52 aa3.85□□□□□ -1.79
CDHR3-204ENST00000466351 C7orf65Q6ZTY9 151 aa3.85□□□□□ -1.79
CDHR3-204ENST00000466351 PKD1P98161 4303 aa3.84□□□□□ -1.79
CDHR3-204ENST00000466351 IGKV2D-30A0A075B6S6 120 aa3.84□□□□□ -1.79
CDHR3-204ENST00000466351 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
CDHR3-204ENST00000466351 C20orf166-AS1Q96NR2 134 aa3.83□□□□□ -1.8
CDHR3-204ENST00000466351 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
CDHR3-204ENST00000466351 DNAH5Q8TE73 4624 aa3.83□□□□□ -1.8
CDHR3-204ENST00000466351 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
CDHR3-204ENST00000466351 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
CDHR3-204ENST00000466351 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
CDHR3-204ENST00000466351 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
CDHR3-204ENST00000466351 A8MUU9 505 aa3.81□□□□□ -1.8
CDHR3-204ENST00000466351 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
CDHR3-204ENST00000466351 KRTAP10-4P60372 401 aaPredicted RBP3.8□□□□□ -1.8
CDHR3-204ENST00000466351 LCA10Q71F78 164 aa3.8□□□□□ -1.8
CDHR3-204ENST00000466351 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
CDHR3-204ENST00000466351 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
CDHR3-204ENST00000466351 A0A1B0GU69 56 aa3.78□□□□□ -1.8
CDHR3-204ENST00000466351 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
CDHR3-204ENST00000466351 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
CDHR3-204ENST00000466351 A6NN06 94 aa3.77□□□□□ -1.81
CDHR3-204ENST00000466351 UQCR11O14957 56 aa3.76□□□□□ -1.81
CDHR3-204ENST00000466351 LRP1BQ9NZR2 4599 aa3.75□□□□□ -1.81
CDHR3-204ENST00000466351 SPINK7P58062 85 aa3.75□□□□□ -1.81
CDHR3-204ENST00000466351 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
CDHR3-204ENST00000466351 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
CDHR3-204ENST00000466351 SACSQ9NZJ4 4579 aa3.72□□□□□ -1.81
CDHR3-204ENST00000466351 A8MU10 97 aa3.72□□□□□ -1.81
CDHR3-204ENST00000466351 SEC61GP60059 68 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms