RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.69
LETM1-202ENST00000466175 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
LETM1-202ENST00000466175 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
LETM1-202ENST00000466175 KRTAP17-1Q9BYP8 105 aa10.72□□□□□ -0.69
LETM1-202ENST00000466175 IGHV6-1A0A0B4J1U7 121 aa10.71□□□□□ -0.69
LETM1-202ENST00000466175 H0Y9P7 68 aa10.71□□□□□ -0.69
LETM1-202ENST00000466175 Q5XG85 94 aa10.71□□□□□ -0.69
LETM1-202ENST00000466175 A0A087X002 238 aa10.68□□□□□ -0.7
LETM1-202ENST00000466175 KRTAP13-2Q52LG2 175 aa10.68□□□□□ -0.7
LETM1-202ENST00000466175 RYR1P21817 5038 aa10.67□□□□□ -0.7
LETM1-202ENST00000466175 TRAV22A0A0B4J277 110 aa10.66□□□□□ -0.7
LETM1-202ENST00000466175 OXTP01178 125 aa10.66□□□□□ -0.7
LETM1-202ENST00000466175 KRTAP1-4P0C5Y4 121 aa10.66□□□□□ -0.7
LETM1-202ENST00000466175 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
LETM1-202ENST00000466175 HERC2O95714 4834 aa10.66□□□□□ -0.7
LETM1-202ENST00000466175 APOBP04114 4563 aaKnown RBP10.66□□□□□ -0.7
LETM1-202ENST00000466175 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
LETM1-202ENST00000466175 MRPL34Q9BQ48 92 aaKnown RBP10.66□□□□□ -0.7
LETM1-202ENST00000466175 C8orf87E5RJ46 101 aa10.65□□□□□ -0.7
LETM1-202ENST00000466175 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
LETM1-202ENST00000466175 LIMD2Q9BT23 127 aa10.64□□□□□ -0.71
LETM1-202ENST00000466175 KRTAP4-5Q9BYR2 181 aa10.64□□□□□ -0.71
LETM1-202ENST00000466175 HSPG2P98160 4391 aa10.63□□□□□ -0.71
LETM1-202ENST00000466175 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
LETM1-202ENST00000466175 PLA2G1BP04054 148 aaKnown RBP10.59□□□□□ -0.71
LETM1-202ENST00000466175 Q8N1X5 172 aa10.59□□□□□ -0.71
LETM1-202ENST00000466175 SMIM26A0A096LP01 95 aa10.58□□□□□ -0.72
LETM1-202ENST00000466175 SPANXA2-OT1Q8N9U9 137 aa10.58□□□□□ -0.72
LETM1-202ENST00000466175 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
LETM1-202ENST00000466175 NDUFS5O43920 106 aa10.58□□□□□ -0.72
LETM1-202ENST00000466175 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
LETM1-202ENST00000466175 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
LETM1-202ENST00000466175 C1orf195Q5TG92 126 aa10.55□□□□□ -0.72
LETM1-202ENST00000466175 Q5VSD8 79 aa10.55□□□□□ -0.72
LETM1-202ENST00000466175 SPINK1P00995 79 aa10.54□□□□□ -0.72
LETM1-202ENST00000466175 NOTCH2NLQ7Z3S9 236 aa10.54□□□□□ -0.72
LETM1-202ENST00000466175 LINC00313P59037 77 aa10.51□□□□□ -0.73
LETM1-202ENST00000466175 RPS29P62273 56 aaKnown RBP10.51□□□□□ -0.73
LETM1-202ENST00000466175 FAM229AH3BQW9 127 aa10.5□□□□□ -0.73
LETM1-202ENST00000466175 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
LETM1-202ENST00000466175 FAT1Q14517 4588 aa10.48□□□□□ -0.73
LETM1-202ENST00000466175 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
LETM1-202ENST00000466175 PCLOQ9Y6V0 5065 aa10.45□□□□□ -0.74
LETM1-202ENST00000466175 LOC101927531A0A1B0GV80 90 aa10.44□□□□□ -0.74
LETM1-202ENST00000466175 IGLV7-46A0A075B6I9 117 aa10.43□□□□□ -0.74
LETM1-202ENST00000466175 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
LETM1-202ENST00000466175 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
LETM1-202ENST00000466175 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
LETM1-202ENST00000466175 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
LETM1-202ENST00000466175 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
LETM1-202ENST00000466175 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.75
LETM1-202ENST00000466175 PRR4Q16378 134 aa10.39□□□□□ -0.75
LETM1-202ENST00000466175 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
LETM1-202ENST00000466175 KRTAP10-4P60372 401 aaPredicted RBP10.38□□□□□ -0.75
LETM1-202ENST00000466175 C4orf26Q17RF5 130 aa10.36□□□□□ -0.75
LETM1-202ENST00000466175 PCOTHQ58A44 107 aa10.35□□□□□ -0.75
LETM1-202ENST00000466175 Q5W150 140 aa10.35□□□□□ -0.75
LETM1-202ENST00000466175 KRTAP16-1A8MUX0 517 aa10.34□□□□□ -0.75
LETM1-202ENST00000466175 Q1T7F1 81 aa10.28□□□□□ -0.76
LETM1-202ENST00000466175 V9GYY9 64 aa10.26□□□□□ -0.77
LETM1-202ENST00000466175 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
LETM1-202ENST00000466175 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
LETM1-202ENST00000466175 COA5Q86WW8 74 aa10.22□□□□□ -0.77
LETM1-202ENST00000466175 IGKV2-30P06310 120 aa10.22□□□□□ -0.77
LETM1-202ENST00000466175 DMBT1Q9UGM3 2413 aaPredicted RBP10.19□□□□□ -0.78
LETM1-202ENST00000466175 RETNLBQ9BQ08 111 aa10.14□□□□□ -0.79
LETM1-202ENST00000466175 HRES1P13985 223 aa10.13□□□□□ -0.79
LETM1-202ENST00000466175 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
LETM1-202ENST00000466175 J3QL48 77 aa10.12□□□□□ -0.79
LETM1-202ENST00000466175 ACYP2P14621 99 aa10.12□□□□□ -0.79
LETM1-202ENST00000466175 PRO0628Q9UI54 55 aa10.11□□□□□ -0.79
LETM1-202ENST00000466175 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
LETM1-202ENST00000466175 PKHD1L1Q86WI1 4243 aa10.08□□□□□ -0.8
LETM1-202ENST00000466175 C20orf166-AS1Q96NR2 134 aa10.07□□□□□ -0.8
LETM1-202ENST00000466175 A8MUU9 505 aa10.06□□□□□ -0.8
LETM1-202ENST00000466175 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
LETM1-202ENST00000466175 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
LETM1-202ENST00000466175 C7orf65Q6ZTY9 151 aa10.03□□□□□ -0.8
LETM1-202ENST00000466175 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
LETM1-202ENST00000466175 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
LETM1-202ENST00000466175 C9orf92A6NGG3 77 aa10□□□□□ -0.81
LETM1-202ENST00000466175 PSPHP1O15172 72 aa10□□□□□ -0.81
LETM1-202ENST00000466175 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
LETM1-202ENST00000466175 HERC1Q15751 4861 aa9.97□□□□□ -0.81
LETM1-202ENST00000466175 A8MUN3 132 aa9.97□□□□□ -0.81
LETM1-202ENST00000466175 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.82
LETM1-202ENST00000466175 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
LETM1-202ENST00000466175 Q5VV11 94 aa9.93□□□□□ -0.82
LETM1-202ENST00000466175 BRK1Q8WUW1 75 aa9.93□□□□□ -0.82
LETM1-202ENST00000466175 Q75L30 129 aa9.93□□□□□ -0.82
LETM1-202ENST00000466175 TNXBP22105 4242 aa9.81□□□□□ -0.84
LETM1-202ENST00000466175 SPINK7P58062 85 aa9.78□□□□□ -0.84
LETM1-202ENST00000466175 ATP11AUNQ6ZP68 121 aa9.75□□□□□ -0.85
LETM1-202ENST00000466175 A6NED7 52 aa9.73□□□□□ -0.85
LETM1-202ENST00000466175 SPTSSBQ8NFR3 76 aa9.73□□□□□ -0.85
LETM1-202ENST00000466175 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
LETM1-202ENST00000466175 A0A1B0GU69 56 aa9.68□□□□□ -0.86
LETM1-202ENST00000466175 XP32Q5T750 250 aa9.66□□□□□ -0.86
LETM1-202ENST00000466175 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
LETM1-202ENST00000466175 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms