RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 Q75L30 129 aa9.86□□□□□ -0.83
HOXA9-203ENST00000465941 MUC2Q02817 5179 aa9.86□□□□□ -0.83
HOXA9-203ENST00000465941 IGHV6-1A0A0B4J1U7 121 aa9.83□□□□□ -0.84
HOXA9-203ENST00000465941 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
HOXA9-203ENST00000465941 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
HOXA9-203ENST00000465941 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
HOXA9-203ENST00000465941 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
HOXA9-203ENST00000465941 A8MUU9 505 aa9.8□□□□□ -0.84
HOXA9-203ENST00000465941 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
HOXA9-203ENST00000465941 NDUFB1O75438 58 aa9.8□□□□□ -0.84
HOXA9-203ENST00000465941 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
HOXA9-203ENST00000465941 A8MWP4 228 aa9.79□□□□□ -0.84
HOXA9-203ENST00000465941 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
HOXA9-203ENST00000465941 ATP11AUNQ6ZP68 121 aa9.77□□□□□ -0.85
HOXA9-203ENST00000465941 A0A0U1RQV1 116 aa9.76□□□□□ -0.85
HOXA9-203ENST00000465941 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
HOXA9-203ENST00000465941 Q6ZVQ6 151 aa9.75□□□□□ -0.85
HOXA9-203ENST00000465941 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
HOXA9-203ENST00000465941 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
HOXA9-203ENST00000465941 A0A1B0GV90 55 aa9.72□□□□□ -0.85
HOXA9-203ENST00000465941 BPY2O14599 106 aa9.72□□□□□ -0.85
HOXA9-203ENST00000465941 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
HOXA9-203ENST00000465941 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
HOXA9-203ENST00000465941 K7EQZ3 153 aa9.65□□□□□ -0.86
HOXA9-203ENST00000465941 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
HOXA9-203ENST00000465941 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
HOXA9-203ENST00000465941 KRTAP9-2Q9BYQ4 174 aa9.6□□□□□ -0.87
HOXA9-203ENST00000465941 ACYP1P07311 99 aa9.58□□□□□ -0.88
HOXA9-203ENST00000465941 hDV103S1A0JD37 113 aa9.57□□□□□ -0.88
HOXA9-203ENST00000465941 Q8N9L7 120 aa9.57□□□□□ -0.88
HOXA9-203ENST00000465941 TMEM254Q8TBM7 123 aa9.57□□□□□ -0.88
HOXA9-203ENST00000465941 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
HOXA9-203ENST00000465941 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
HOXA9-203ENST00000465941 MRPL34Q9BQ48 92 aaKnown RBP9.56□□□□□ -0.88
HOXA9-203ENST00000465941 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
HOXA9-203ENST00000465941 CXCL6P80162 114 aa9.53□□□□□ -0.88
HOXA9-203ENST00000465941 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
HOXA9-203ENST00000465941 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
HOXA9-203ENST00000465941 FAT4Q6V0I7 4981 aa9.52□□□□□ -0.89
HOXA9-203ENST00000465941 CASC2Q6XLA1 102 aa9.49□□□□□ -0.89
HOXA9-203ENST00000465941 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
HOXA9-203ENST00000465941 WFDC13Q8IUB5 93 aa9.47□□□□□ -0.89
HOXA9-203ENST00000465941 NDUFS5O43920 106 aa9.45□□□□□ -0.9
HOXA9-203ENST00000465941 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
HOXA9-203ENST00000465941 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
HOXA9-203ENST00000465941 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
HOXA9-203ENST00000465941 SPINK7P58062 85 aa9.39□□□□□ -0.91
HOXA9-203ENST00000465941 J3QR89 54 aa9.37□□□□□ -0.91
HOXA9-203ENST00000465941 HRES1P13985 223 aa9.37□□□□□ -0.91
HOXA9-203ENST00000465941 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
HOXA9-203ENST00000465941 MT1HP80294 61 aa9.36□□□□□ -0.91
HOXA9-203ENST00000465941 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
HOXA9-203ENST00000465941 Q5W150 140 aa9.34□□□□□ -0.91
HOXA9-203ENST00000465941 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
HOXA9-203ENST00000465941 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
HOXA9-203ENST00000465941 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
HOXA9-203ENST00000465941 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
HOXA9-203ENST00000465941 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
HOXA9-203ENST00000465941 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
HOXA9-203ENST00000465941 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
HOXA9-203ENST00000465941 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
HOXA9-203ENST00000465941 M0R2T5 61 aa9.2□□□□□ -0.94
HOXA9-203ENST00000465941 A0A087WVE0 104 aa9.18□□□□□ -0.94
HOXA9-203ENST00000465941 K7ERU9 68 aa9.17□□□□□ -0.94
HOXA9-203ENST00000465941 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.94
HOXA9-203ENST00000465941 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
HOXA9-203ENST00000465941 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
HOXA9-203ENST00000465941 UQCRQO14949 82 aa9.1□□□□□ -0.95
HOXA9-203ENST00000465941 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
HOXA9-203ENST00000465941 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
HOXA9-203ENST00000465941 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
HOXA9-203ENST00000465941 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
HOXA9-203ENST00000465941 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
HOXA9-203ENST00000465941 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
HOXA9-203ENST00000465941 ATOX1O00244 68 aa9.01□□□□□ -0.97
HOXA9-203ENST00000465941 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
HOXA9-203ENST00000465941 MT-ATP8P03928 68 aa9□□□□□ -0.97
HOXA9-203ENST00000465941 H0Y9P7 68 aa8.99□□□□□ -0.97
HOXA9-203ENST00000465941 FSIP2Q5CZC0 6907 aa8.97□□□□□ -0.97
HOXA9-203ENST00000465941 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
HOXA9-203ENST00000465941 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
HOXA9-203ENST00000465941 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
HOXA9-203ENST00000465941 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
HOXA9-203ENST00000465941 C5orf47Q569G3 176 aa8.92□□□□□ -0.98
HOXA9-203ENST00000465941 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
HOXA9-203ENST00000465941 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
HOXA9-203ENST00000465941 MP68P56378 58 aa8.9□□□□□ -0.98
HOXA9-203ENST00000465941 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
HOXA9-203ENST00000465941 H3BPC8 53 aa8.84□□□□□ -0.99
HOXA9-203ENST00000465941 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
HOXA9-203ENST00000465941 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
HOXA9-203ENST00000465941 MT2AP02795 61 aa8.82□□□□□ -1
HOXA9-203ENST00000465941 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
HOXA9-203ENST00000465941 KLKP1Q107X0 134 aa8.8□□□□□ -1
HOXA9-203ENST00000465941 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
HOXA9-203ENST00000465941 S4R3F8 94 aa8.77□□□□□ -1.01
HOXA9-203ENST00000465941 MT1FP04733 61 aa8.75□□□□□ -1.01
HOXA9-203ENST00000465941 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
HOXA9-203ENST00000465941 LCA10Q71F78 164 aa8.73□□□□□ -1.01
HOXA9-203ENST00000465941 A8MUN3 132 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms