RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 KRTAP16-1A8MUX0 517 aa13.62□□□□□ -0.23
SMC4-206ENST00000465903 H3BT86 120 aa13.62□□□□□ -0.23
SMC4-206ENST00000465903 A0A1B0GW54 56 aa13.6□□□□□ -0.23
SMC4-206ENST00000465903 COL5A1-AS1Q5SY13 56 aa13.58□□□□□ -0.24
SMC4-206ENST00000465903 SPCS1Q9Y6A9 102 aa13.58□□□□□ -0.24
SMC4-206ENST00000465903 IGHV6-1A0A0B4J1U7 121 aa13.57□□□□□ -0.24
SMC4-206ENST00000465903 J3KT08 172 aa13.54□□□□□ -0.24
SMC4-206ENST00000465903 A0A1B0GVX0 72 aa13.53□□□□□ -0.24
SMC4-206ENST00000465903 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
SMC4-206ENST00000465903 C8orf87E5RJ46 101 aa13.48□□□□□ -0.25
SMC4-206ENST00000465903 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.25
SMC4-206ENST00000465903 MT1HP80294 61 aa13.42□□□□□ -0.26
SMC4-206ENST00000465903 K7EP34 96 aa13.41□□□□□ -0.26
SMC4-206ENST00000465903 NREPQ16612 68 aa13.41□□□□□ -0.26
SMC4-206ENST00000465903 PRO0461Q9UI25 63 aa13.41□□□□□ -0.26
SMC4-206ENST00000465903 A8MWP4 228 aa13.4□□□□□ -0.26
SMC4-206ENST00000465903 NDUFB1O75438 58 aa13.4□□□□□ -0.26
SMC4-206ENST00000465903 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
SMC4-206ENST00000465903 C8orf17Q9NRJ1 99 aa13.34□□□□□ -0.27
SMC4-206ENST00000465903 COX6B2Q6YFQ2 88 aa13.33□□□□□ -0.28
SMC4-206ENST00000465903 PRR15Q8IV56 129 aa13.3□□□□□ -0.28
SMC4-206ENST00000465903 Q8N9P0 234 aaPredicted RBP13.28□□□□□ -0.28
SMC4-206ENST00000465903 FLGP20930 4061 aaPredicted RBP13.28□□□□□ -0.28
SMC4-206ENST00000465903 GTF2H5Q6ZYL4 71 aa13.24□□□□□ -0.29
SMC4-206ENST00000465903 Q6ZVQ6 151 aa13.22□□□□□ -0.29
SMC4-206ENST00000465903 ZCCHC13Q8WW36 166 aaKnown RBP13.22□□□□□ -0.29
SMC4-206ENST00000465903 MMP24-AS1A0A0U1RRL7 71 aa13.2□□□□□ -0.3
SMC4-206ENST00000465903 K7EQZ3 153 aa13.2□□□□□ -0.3
SMC4-206ENST00000465903 BPY2O14599 106 aa13.19□□□□□ -0.3
SMC4-206ENST00000465903 KRTAP9-2Q9BYQ4 174 aa13.19□□□□□ -0.3
SMC4-206ENST00000465903 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
SMC4-206ENST00000465903 F8W1H4 67 aa13.16□□□□□ -0.3
SMC4-206ENST00000465903 HRES1P13985 223 aa13.15□□□□□ -0.3
SMC4-206ENST00000465903 TMEM254Q8TBM7 123 aa13.14□□□□□ -0.31
SMC4-206ENST00000465903 LINC00846Q9NV44 126 aa13.14□□□□□ -0.31
SMC4-206ENST00000465903 MRPL34Q9BQ48 92 aaKnown RBP13.13□□□□□ -0.31
SMC4-206ENST00000465903 MPLKIPQ8TAP9 179 aa13.12□□□□□ -0.31
SMC4-206ENST00000465903 M0R2T5 61 aa13.11□□□□□ -0.31
SMC4-206ENST00000465903 KRTAP10-6P60371 365 aaPredicted RBP13.11□□□□□ -0.31
SMC4-206ENST00000465903 LORP23490 312 aaPredicted RBP13.1□□□□□ -0.31
SMC4-206ENST00000465903 hDV103S1A0JD37 113 aa13.09□□□□□ -0.31
SMC4-206ENST00000465903 ETDBQ3ZM63 59 aa13.09□□□□□ -0.31
SMC4-206ENST00000465903 Q8N9L7 120 aa13.07□□□□□ -0.32
SMC4-206ENST00000465903 SPINK7P58062 85 aa13.05□□□□□ -0.32
SMC4-206ENST00000465903 UBL5Q9BZL1 73 aa13.04□□□□□ -0.32
SMC4-206ENST00000465903 RBM12B-AS1Q9P1G2 102 aa13□□□□□ -0.33
SMC4-206ENST00000465903 WFDC13Q8IUB5 93 aa12.98□□□□□ -0.33
SMC4-206ENST00000465903 FAM236DA0A1B0GTK5 79 aa12.97□□□□□ -0.33
SMC4-206ENST00000465903 FAM236CP0DP71 79 aa12.97□□□□□ -0.33
SMC4-206ENST00000465903 NDUFS5O43920 106 aa12.95□□□□□ -0.34
SMC4-206ENST00000465903 CASC2Q6XLA1 102 aa12.94□□□□□ -0.34
SMC4-206ENST00000465903 Q5W150 140 aa12.89□□□□□ -0.35
SMC4-206ENST00000465903 HCG22E2RYF7 251 aa12.85□□□□□ -0.35
SMC4-206ENST00000465903 CXCL6P80162 114 aa12.82□□□□□ -0.36
SMC4-206ENST00000465903 A0A1B0GV90 55 aa12.77□□□□□ -0.37
SMC4-206ENST00000465903 KRTAP9-8Q9BYQ0 159 aa12.77□□□□□ -0.37
SMC4-206ENST00000465903 ACYP1P07311 99 aa12.74□□□□□ -0.37
SMC4-206ENST00000465903 IGKV2D-30A0A075B6S6 120 aa12.72□□□□□ -0.37
SMC4-206ENST00000465903 IGKV2-30P06310 120 aa12.72□□□□□ -0.37
SMC4-206ENST00000465903 FAM240AA0A1B0GVK7 77 aa12.7□□□□□ -0.38
SMC4-206ENST00000465903 C7orf65Q6ZTY9 151 aa12.69□□□□□ -0.38
SMC4-206ENST00000465903 KRTAP9-6A0A140TA67 174 aa12.64□□□□□ -0.39
SMC4-206ENST00000465903 MT2AP02795 61 aa12.59□□□□□ -0.39
SMC4-206ENST00000465903 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
SMC4-206ENST00000465903 H1FX-AS1Q4G0G2 97 aa12.55□□□□□ -0.4
SMC4-206ENST00000465903 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
SMC4-206ENST00000465903 KRTAP3-3Q9BYR6 98 aa12.51□□□□□ -0.41
SMC4-206ENST00000465903 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
SMC4-206ENST00000465903 MT1FP04733 61 aa12.5□□□□□ -0.41
SMC4-206ENST00000465903 C4orf26Q17RF5 130 aa12.5□□□□□ -0.41
SMC4-206ENST00000465903 CRCT1Q9UGL9 99 aa12.5□□□□□ -0.41
SMC4-206ENST00000465903 FSIP2Q5CZC0 6907 aa12.48□□□□□ -0.41
SMC4-206ENST00000465903 HIST1H4AP62805 103 aaKnown RBP12.46□□□□□ -0.41
SMC4-206ENST00000465903 LINC00643Q86TS7 51 aa12.46□□□□□ -0.41
SMC4-206ENST00000465903 KRTAP10-10P60014 251 aa12.4□□□□□ -0.42
SMC4-206ENST00000465903 KRTAP3-1Q9BYR8 98 aa12.39□□□□□ -0.43
SMC4-206ENST00000465903 A0A087WVE0 104 aa12.37□□□□□ -0.43
SMC4-206ENST00000465903 KRTAP9-3Q9BYQ3 159 aa12.36□□□□□ -0.43
SMC4-206ENST00000465903 CYP4F30PQ9H0H9 118 aa12.33□□□□□ -0.44
SMC4-206ENST00000465903 TRAV22A0A0B4J277 110 aa12.32□□□□□ -0.44
SMC4-206ENST00000465903 C1orf64Q8NEQ6 169 aa12.3□□□□□ -0.44
SMC4-206ENST00000465903 J3QR89 54 aa12.28□□□□□ -0.44
SMC4-206ENST00000465903 UQCRQO14949 82 aa12.28□□□□□ -0.44
SMC4-206ENST00000465903 USH2AO75445 5202 aa12.26□□□□□ -0.45
SMC4-206ENST00000465903 LCE2BO14633 110 aa12.24□□□□□ -0.45
SMC4-206ENST00000465903 LOC101927531A0A1B0GV80 90 aa12.23□□□□□ -0.45
SMC4-206ENST00000465903 H0Y9P7 68 aa12.2□□□□□ -0.46
SMC4-206ENST00000465903 S4R3F8 94 aa12.16□□□□□ -0.46
SMC4-206ENST00000465903 ATOX1O00244 68 aa12.14□□□□□ -0.47
SMC4-206ENST00000465903 C5orf47Q569G3 176 aa12.13□□□□□ -0.47
SMC4-206ENST00000465903 OCR1Q9BZK8 76 aa12.13□□□□□ -0.47
SMC4-206ENST00000465903 LCA10Q71F78 164 aa12.11□□□□□ -0.47
SMC4-206ENST00000465903 SSPOA2VEC9 5147 aa12.1□□□□□ -0.47
SMC4-206ENST00000465903 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
SMC4-206ENST00000465903 CSAG1Q6PB30 78 aa12.03□□□□□ -0.48
SMC4-206ENST00000465903 KLKP1Q107X0 134 aa11.98□□□□□ -0.49
SMC4-206ENST00000465903 MP68P56378 58 aa11.97□□□□□ -0.49
SMC4-206ENST00000465903 K7ERU9 68 aa11.95□□□□□ -0.5
SMC4-206ENST00000465903 MT-ATP8P03928 68 aa11.91□□□□□ -0.5
SMC4-206ENST00000465903 IMUPQ9GZP8 106 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms