RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 A0A1B0GVX0 72 aa8.04□□□□□ -1.12
HLA-F-223ENST00000465459 BPY2O14599 106 aa8.04□□□□□ -1.12
HLA-F-223ENST00000465459 XP32Q5T750 250 aa8.04□□□□□ -1.12
HLA-F-223ENST00000465459 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
HLA-F-223ENST00000465459 LINC00313P59037 77 aa8.02□□□□□ -1.13
HLA-F-223ENST00000465459 IGHV6-1A0A0B4J1U7 121 aa8.01□□□□□ -1.13
HLA-F-223ENST00000465459 J3QR89 54 aa8.01□□□□□ -1.13
HLA-F-223ENST00000465459 DSCR10P59022 87 aa8□□□□□ -1.13
HLA-F-223ENST00000465459 PRR15Q8IV56 129 aa8□□□□□ -1.13
HLA-F-223ENST00000465459 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
HLA-F-223ENST00000465459 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
HLA-F-223ENST00000465459 CXCL6P80162 114 aa7.96□□□□□ -1.14
HLA-F-223ENST00000465459 Q75L30 129 aa7.95□□□□□ -1.14
HLA-F-223ENST00000465459 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
HLA-F-223ENST00000465459 K7EQZ3 153 aa7.94□□□□□ -1.14
HLA-F-223ENST00000465459 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
HLA-F-223ENST00000465459 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
HLA-F-223ENST00000465459 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
HLA-F-223ENST00000465459 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
HLA-F-223ENST00000465459 A8MUU9 505 aa7.92□□□□□ -1.14
HLA-F-223ENST00000465459 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
HLA-F-223ENST00000465459 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
HLA-F-223ENST00000465459 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
HLA-F-223ENST00000465459 K7ERU9 68 aa7.89□□□□□ -1.15
HLA-F-223ENST00000465459 UBR4Q5T4S7 5183 aa7.89□□□□□ -1.15
HLA-F-223ENST00000465459 Q8N9L7 120 aa7.88□□□□□ -1.15
HLA-F-223ENST00000465459 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
HLA-F-223ENST00000465459 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
HLA-F-223ENST00000465459 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
HLA-F-223ENST00000465459 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
HLA-F-223ENST00000465459 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
HLA-F-223ENST00000465459 MRPL34Q9BQ48 92 aaKnown RBP7.84□□□□□ -1.15
HLA-F-223ENST00000465459 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
HLA-F-223ENST00000465459 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
HLA-F-223ENST00000465459 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
HLA-F-223ENST00000465459 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
HLA-F-223ENST00000465459 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
HLA-F-223ENST00000465459 ZCCHC13Q8WW36 166 aaKnown RBP7.75□□□□□ -1.17
HLA-F-223ENST00000465459 NDUFS5O43920 106 aa7.74□□□□□ -1.17
HLA-F-223ENST00000465459 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
HLA-F-223ENST00000465459 RNF213Q63HN8 5207 aa7.71□□□□□ -1.18
HLA-F-223ENST00000465459 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
HLA-F-223ENST00000465459 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
HLA-F-223ENST00000465459 MUC2Q02817 5179 aa7.66□□□□□ -1.18
HLA-F-223ENST00000465459 A0A087WVE0 104 aa7.66□□□□□ -1.18
HLA-F-223ENST00000465459 A0A0U1RQV1 116 aa7.65□□□□□ -1.18
HLA-F-223ENST00000465459 MT-ATP8P03928 68 aa7.63□□□□□ -1.19
HLA-F-223ENST00000465459 Q5W150 140 aa7.62□□□□□ -1.19
HLA-F-223ENST00000465459 SPINK7P58062 85 aa7.6□□□□□ -1.19
HLA-F-223ENST00000465459 UQCRQO14949 82 aa7.57□□□□□ -1.2
HLA-F-223ENST00000465459 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
HLA-F-223ENST00000465459 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
HLA-F-223ENST00000465459 SCGB1A1P11684 91 aa7.53□□□□□ -1.2
HLA-F-223ENST00000465459 HRES1P13985 223 aa7.53□□□□□ -1.2
HLA-F-223ENST00000465459 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
HLA-F-223ENST00000465459 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
HLA-F-223ENST00000465459 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
HLA-F-223ENST00000465459 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
HLA-F-223ENST00000465459 MPLKIPQ8TAP9 179 aa7.51□□□□□ -1.21
HLA-F-223ENST00000465459 ATOX1O00244 68 aa7.5□□□□□ -1.21
HLA-F-223ENST00000465459 RBM12B-AS1Q9P1G2 102 aa7.5□□□□□ -1.21
HLA-F-223ENST00000465459 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
HLA-F-223ENST00000465459 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
HLA-F-223ENST00000465459 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
HLA-F-223ENST00000465459 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
HLA-F-223ENST00000465459 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
HLA-F-223ENST00000465459 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
HLA-F-223ENST00000465459 H0Y9P7 68 aa7.46□□□□□ -1.22
HLA-F-223ENST00000465459 C5orf47Q569G3 176 aa7.46□□□□□ -1.22
HLA-F-223ENST00000465459 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
HLA-F-223ENST00000465459 MP68P56378 58 aa7.44□□□□□ -1.22
HLA-F-223ENST00000465459 H3BPC8 53 aa7.42□□□□□ -1.22
HLA-F-223ENST00000465459 CYP4F30PQ9H0H9 118 aa7.42□□□□□ -1.22
HLA-F-223ENST00000465459 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
HLA-F-223ENST00000465459 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
HLA-F-223ENST00000465459 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.22
HLA-F-223ENST00000465459 C1orf64Q8NEQ6 169 aa7.39□□□□□ -1.23
HLA-F-223ENST00000465459 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
HLA-F-223ENST00000465459 LINC00208Q96KT6 92 aa7.38□□□□□ -1.23
HLA-F-223ENST00000465459 MT1HP80294 61 aa7.35□□□□□ -1.23
HLA-F-223ENST00000465459 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
HLA-F-223ENST00000465459 SERP2Q8N6R1 65 aa7.31□□□□□ -1.24
HLA-F-223ENST00000465459 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
HLA-F-223ENST00000465459 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
HLA-F-223ENST00000465459 M0R2T5 61 aa7.25□□□□□ -1.25
HLA-F-223ENST00000465459 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
HLA-F-223ENST00000465459 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
HLA-F-223ENST00000465459 A8MUN3 132 aa7.2□□□□□ -1.26
HLA-F-223ENST00000465459 COX7CP15954 63 aa7.19□□□□□ -1.26
HLA-F-223ENST00000465459 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
HLA-F-223ENST00000465459 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
HLA-F-223ENST00000465459 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
HLA-F-223ENST00000465459 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.26
HLA-F-223ENST00000465459 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
HLA-F-223ENST00000465459 S4R3F8 94 aa7.13□□□□□ -1.27
HLA-F-223ENST00000465459 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
HLA-F-223ENST00000465459 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
HLA-F-223ENST00000465459 NDUFC1O43677 76 aa7.07□□□□□ -1.28
HLA-F-223ENST00000465459 LCA10Q71F78 164 aa7.07□□□□□ -1.28
HLA-F-223ENST00000465459 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms