RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 CEP350Q5VT06 3117 aa3.59□□□□□ -1.83
PBX1-204ENST00000465089 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
PBX1-204ENST00000465089 TNRC18O15417 2968 aaPredicted RBP3.58□□□□□ -1.84
PBX1-204ENST00000465089 WDFY4Q6ZS81 3184 aa3.57□□□□□ -1.84
PBX1-204ENST00000465089 TRIOO75962 3097 aa3.57□□□□□ -1.84
PBX1-204ENST00000465089 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
PBX1-204ENST00000465089 LAMA2P24043 3122 aaKnown RBP3.54□□□□□ -1.84
PBX1-204ENST00000465089 DNAH12Q6ZR08 3092 aa3.54□□□□□ -1.84
PBX1-204ENST00000465089 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
PBX1-204ENST00000465089 LAMA1P25391 3075 aa3.53□□□□□ -1.84
PBX1-204ENST00000465089 UTRNP46939 3433 aa3.53□□□□□ -1.84
PBX1-204ENST00000465089 MXRA5Q9NR99 2828 aa3.53□□□□□ -1.84
PBX1-204ENST00000465089 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
PBX1-204ENST00000465089 LRBAP50851 2863 aa3.52□□□□□ -1.85
PBX1-204ENST00000465089 GOLGB1Q14789 3259 aaKnown RBP3.51□□□□□ -1.85
PBX1-204ENST00000465089 MGAQ8IWI9 3026 aa3.5□□□□□ -1.85
PBX1-204ENST00000465089 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
PBX1-204ENST00000465089 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
PBX1-204ENST00000465089 SRRM2Q9UQ35 2752 aaKnown RBP3.48□□□□□ -1.85
PBX1-204ENST00000465089 CHD7Q9P2D1 2997 aa3.47□□□□□ -1.85
PBX1-204ENST00000465089 CELSR1Q9NYQ6 3014 aa3.46□□□□□ -1.86
PBX1-204ENST00000465089 VWFP04275 2813 aa3.46□□□□□ -1.86
PBX1-204ENST00000465089 C5orf42Q9H799 3197 aa3.45□□□□□ -1.86
PBX1-204ENST00000465089 TENM4Q6N022 2769 aa3.43□□□□□ -1.86
PBX1-204ENST00000465089 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
PBX1-204ENST00000465089 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
PBX1-204ENST00000465089 VPS13AQ96RL7 3174 aa3.4□□□□□ -1.86
PBX1-204ENST00000465089 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
PBX1-204ENST00000465089 UNC80Q8N2C7 3258 aa3.38□□□□□ -1.87
PBX1-204ENST00000465089 COL12A1Q99715 3063 aa3.38□□□□□ -1.87
PBX1-204ENST00000465089 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
PBX1-204ENST00000465089 DMXL2Q8TDJ6 3036 aa3.36□□□□□ -1.87
PBX1-204ENST00000465089 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
PBX1-204ENST00000465089 XIRP2A4UGR9 3374 aa3.35□□□□□ -1.87
PBX1-204ENST00000465089 ZZEF1O43149 2961 aa3.34□□□□□ -1.87
PBX1-204ENST00000465089 ASH1LQ9NR48 2969 aaKnown RBP3.34□□□□□ -1.87
PBX1-204ENST00000465089 KRTAP12-3P60328 96 aa3.34□□□□□ -1.88
PBX1-204ENST00000465089 CRYBG3Q68DQ2 2970 aa3.32□□□□□ -1.88
PBX1-204ENST00000465089 ZANQ9Y493 2812 aa3.32□□□□□ -1.88
PBX1-204ENST00000465089 CELSR2Q9HCU4 2923 aa3.3□□□□□ -1.88
PBX1-204ENST00000465089 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
PBX1-204ENST00000465089 PRUNE2Q8WUY3 3088 aa3.29□□□□□ -1.88
PBX1-204ENST00000465089 DCHS2Q6V1P9 2916 aa3.29□□□□□ -1.88
PBX1-204ENST00000465089 COL7A1Q02388 2944 aa3.29□□□□□ -1.88
PBX1-204ENST00000465089 MEGF8Q7Z7M0 2845 aa3.23□□□□□ -1.89
PBX1-204ENST00000465089 REV3LO60673 3130 aa3.2□□□□□ -1.9
PBX1-204ENST00000465089 TACC2O95359 2948 aa3.19□□□□□ -1.9
PBX1-204ENST00000465089 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
PBX1-204ENST00000465089 ATMQ13315 3056 aa3.17□□□□□ -1.9
PBX1-204ENST00000465089 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
PBX1-204ENST00000465089 HTTP42858 3142 aa3.16□□□□□ -1.9
PBX1-204ENST00000465089 ADGRG4Q8IZF6 3080 aa3.15□□□□□ -1.9
PBX1-204ENST00000465089 RANBP2P49792 3224 aaKnown RBP3.14□□□□□ -1.91
PBX1-204ENST00000465089 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
PBX1-204ENST00000465089 VCANP13611 3396 aa3.11□□□□□ -1.91
PBX1-204ENST00000465089 FBN3Q75N90 2809 aa3.11□□□□□ -1.91
PBX1-204ENST00000465089 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
PBX1-204ENST00000465089 OTOGQ6ZRI0 2925 aa3.07□□□□□ -1.92
PBX1-204ENST00000465089 ZFHX4Q86UP3 3567 aa3.06□□□□□ -1.92
PBX1-204ENST00000465089 LAMA3Q16787 3333 aa3.06□□□□□ -1.92
PBX1-204ENST00000465089 KRTAP3-1Q9BYR8 98 aa3.05□□□□□ -1.92
PBX1-204ENST00000465089 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
PBX1-204ENST00000465089 DNAH14Q0VDD8 3507 aa3.04□□□□□ -1.92
PBX1-204ENST00000465089 MKI67P46013 3256 aaKnown RBP3.03□□□□□ -1.92
PBX1-204ENST00000465089 DMXL1Q9Y485 3027 aa3.01□□□□□ -1.93
PBX1-204ENST00000465089 KRTAP12-4P60329 112 aa3□□□□□ -1.93
PBX1-204ENST00000465089 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
PBX1-204ENST00000465089 CFAP47Q6ZTR5 3102 aa2.97□□□□□ -1.93
PBX1-204ENST00000465089 ZFHX3Q15911 3703 aa2.96□□□□□ -1.94
PBX1-204ENST00000465089 BRCA2P51587 3418 aa2.96□□□□□ -1.94
PBX1-204ENST00000465089 CDH23Q9H251 3354 aa2.95□□□□□ -1.94
PBX1-204ENST00000465089 FBN2P35556 2912 aa2.95□□□□□ -1.94
PBX1-204ENST00000465089 KRTAP3-2Q9BYR7 98 aa2.94□□□□□ -1.94
PBX1-204ENST00000465089 FREM2Q5SZK8 3169 aa2.94□□□□□ -1.94
PBX1-204ENST00000465089 DCHS1Q96JQ0 3298 aa2.94□□□□□ -1.94
PBX1-204ENST00000465089 EYSQ5T1H1 3165 aa2.93□□□□□ -1.94
PBX1-204ENST00000465089 COL6A3P12111 3177 aa2.91□□□□□ -1.94
PBX1-204ENST00000465089 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
PBX1-204ENST00000465089 SPEGQ15772 3267 aa2.91□□□□□ -1.94
PBX1-204ENST00000465089 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
PBX1-204ENST00000465089 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
PBX1-204ENST00000465089 KRTAP3-3Q9BYR6 98 aa2.9□□□□□ -1.95
PBX1-204ENST00000465089 FBN1P35555 2871 aaKnown RBP2.89□□□□□ -1.95
PBX1-204ENST00000465089 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
PBX1-204ENST00000465089 CELSR3Q9NYQ7 3312 aa2.87□□□□□ -1.95
PBX1-204ENST00000465089 SPENQ96T58 3664 aaKnown RBP2.84□□□□□ -1.95
PBX1-204ENST00000465089 LOC400499M0QZD8 3231 aa2.84□□□□□ -1.95
PBX1-204ENST00000465089 WDFY3Q8IZQ1 3526 aa2.84□□□□□ -1.95
PBX1-204ENST00000465089 SZT2Q5T011 3432 aa2.77□□□□□ -1.97
PBX1-204ENST00000465089 MT1GP13640 62 aa2.76□□□□□ -1.97
PBX1-204ENST00000465089 RELNP78509 3460 aa2.75□□□□□ -1.97
PBX1-204ENST00000465089 MYO15AQ9UKN7 3530 aa2.74□□□□□ -1.97
PBX1-204ENST00000465089 ASPMQ8IZT6 3477 aa2.71□□□□□ -1.98
PBX1-204ENST00000465089 SPRR2AP35326 72 aa2.71□□□□□ -1.98
PBX1-204ENST00000465089 LCE2BO14633 110 aa2.69□□□□□ -1.98
PBX1-204ENST00000465089 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
PBX1-204ENST00000465089 SPTBN5Q9NRC6 3674 aaKnown RBP2.68□□□□□ -1.98
PBX1-204ENST00000465089 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
PBX1-204ENST00000465089 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
PBX1-204ENST00000465089 SPRR2BP35325 72 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms