RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PSMB2P49721 201 aa11.22□□□□□ -0.61
USP42-205ENST00000465073 C8orf87E5RJ46 101 aa11.2□□□□□ -0.62
USP42-205ENST00000465073 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
USP42-205ENST00000465073 COX6CP09669 75 aa11.19□□□□□ -0.62
USP42-205ENST00000465073 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
USP42-205ENST00000465073 A0A1B0GVX0 72 aa11.17□□□□□ -0.62
USP42-205ENST00000465073 K7ERJ3 54 aa11.13□□□□□ -0.63
USP42-205ENST00000465073 HSD52Q0P140 79 aa11.13□□□□□ -0.63
USP42-205ENST00000465073 ZCCHC13Q8WW36 166 aaKnown RBP11.13□□□□□ -0.63
USP42-205ENST00000465073 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
USP42-205ENST00000465073 SPINK7P58062 85 aa11.1□□□□□ -0.63
USP42-205ENST00000465073 RBM3P98179 157 aaKnown RBP11.09□□□□□ -0.63
USP42-205ENST00000465073 J3KT08 172 aa11.08□□□□□ -0.64
USP42-205ENST00000465073 DSCR8Q96T75 97 aa11.07□□□□□ -0.64
USP42-205ENST00000465073 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
USP42-205ENST00000465073 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
USP42-205ENST00000465073 Q8N9P0 234 aaPredicted RBP11.01□□□□□ -0.65
USP42-205ENST00000465073 C9JAW5 83 aa11□□□□□ -0.65
USP42-205ENST00000465073 NDUFB1O75438 58 aa11□□□□□ -0.65
USP42-205ENST00000465073 SCGB1C2P0DMR2 95 aa11□□□□□ -0.65
USP42-205ENST00000465073 Q6ZQT0 140 aa10.99□□□□□ -0.65
USP42-205ENST00000465073 A8MWP4 228 aa10.98□□□□□ -0.65
USP42-205ENST00000465073 KRTAP19-6Q3LI70 58 aa10.98□□□□□ -0.65
USP42-205ENST00000465073 MACF1Q9UPN3 7388 aaKnown RBP10.96□□□□□ -0.65
USP42-205ENST00000465073 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
USP42-205ENST00000465073 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
USP42-205ENST00000465073 WFDC13Q8IUB5 93 aa10.94□□□□□ -0.66
USP42-205ENST00000465073 LYRM7Q5U5X0 104 aa10.93□□□□□ -0.66
USP42-205ENST00000465073 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
USP42-205ENST00000465073 UQCR10Q9UDW1 63 aa10.91□□□□□ -0.66
USP42-205ENST00000465073 SYNE2Q8WXH0 6885 aaKnown RBP10.88□□□□□ -0.67
USP42-205ENST00000465073 A0A1B0GW54 56 aa10.87□□□□□ -0.67
USP42-205ENST00000465073 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
USP42-205ENST00000465073 IGKV3D-7A0A0C4DH55 119 aa10.85□□□□□ -0.67
USP42-205ENST00000465073 Q6ZVQ6 151 aa10.83□□□□□ -0.68
USP42-205ENST00000465073 JMJD7-PLA2G4BH0Y9G9 81 aa10.82□□□□□ -0.68
USP42-205ENST00000465073 LOC110117498A0A087WWA1 95 aa10.81□□□□□ -0.68
USP42-205ENST00000465073 PDE6GP18545 87 aa10.79□□□□□ -0.68
USP42-205ENST00000465073 PRR15Q8IV56 129 aa10.77□□□□□ -0.69
USP42-205ENST00000465073 ATXN8Q156A1 80 aa10.76□□□□□ -0.69
USP42-205ENST00000465073 H1FX-AS1Q4G0G2 97 aa10.76□□□□□ -0.69
USP42-205ENST00000465073 TMEM254Q8TBM7 123 aa10.72□□□□□ -0.69
USP42-205ENST00000465073 MRPL34Q9BQ48 92 aaKnown RBP10.72□□□□□ -0.69
USP42-205ENST00000465073 NREPQ16612 68 aa10.7□□□□□ -0.7
USP42-205ENST00000465073 C14orf132Q9NPU4 83 aa10.69□□□□□ -0.7
USP42-205ENST00000465073 MMP24-AS1A0A0U1RRL7 71 aa10.68□□□□□ -0.7
USP42-205ENST00000465073 KRTAP6-3Q3LI67 103 aa10.67□□□□□ -0.7
USP42-205ENST00000465073 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
USP42-205ENST00000465073 hDV103S1A0JD37 113 aa10.63□□□□□ -0.71
USP42-205ENST00000465073 M0R143 59 aa10.62□□□□□ -0.71
USP42-205ENST00000465073 NDUFS5O43920 106 aa10.62□□□□□ -0.71
USP42-205ENST00000465073 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
USP42-205ENST00000465073 K7EQZ3 153 aa10.57□□□□□ -0.72
USP42-205ENST00000465073 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
USP42-205ENST00000465073 C7orf65Q6ZTY9 151 aa10.55□□□□□ -0.72
USP42-205ENST00000465073 TMA7Q9Y2S6 64 aaKnown RBP10.55□□□□□ -0.72
USP42-205ENST00000465073 Q5W150 140 aa10.53□□□□□ -0.72
USP42-205ENST00000465073 BPY2O14599 106 aa10.47□□□□□ -0.73
USP42-205ENST00000465073 C4orf26Q17RF5 130 aa10.43□□□□□ -0.74
USP42-205ENST00000465073 H3BT86 120 aa10.4□□□□□ -0.74
USP42-205ENST00000465073 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
USP42-205ENST00000465073 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
USP42-205ENST00000465073 C5orf47Q569G3 176 aa10.36□□□□□ -0.75
USP42-205ENST00000465073 FAM236AA0A1B0GUQ0 79 aa10.36□□□□□ -0.75
USP42-205ENST00000465073 FAM236BA0A1B0GV22 79 aa10.36□□□□□ -0.75
USP42-205ENST00000465073 CXCL6P80162 114 aa10.35□□□□□ -0.75
USP42-205ENST00000465073 Q8N9L7 120 aa10.35□□□□□ -0.75
USP42-205ENST00000465073 A6NN06 94 aa10.34□□□□□ -0.75
USP42-205ENST00000465073 BATFQ16520 125 aa10.3□□□□□ -0.76
USP42-205ENST00000465073 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
USP42-205ENST00000465073 MT1BP07438 61 aa10.3□□□□□ -0.76
USP42-205ENST00000465073 NEBP20929 6669 aa10.29□□□□□ -0.76
USP42-205ENST00000465073 Q5VV11 94 aa10.29□□□□□ -0.76
USP42-205ENST00000465073 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
USP42-205ENST00000465073 KRTAP3-1Q9BYR8 98 aa10.27□□□□□ -0.77
USP42-205ENST00000465073 S4R3F8 94 aa10.27□□□□□ -0.77
USP42-205ENST00000465073 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
USP42-205ENST00000465073 KRTAP19-8Q3LI54 63 aa10.25□□□□□ -0.77
USP42-205ENST00000465073 SPRR2GQ9BYE4 73 aa10.25□□□□□ -0.77
USP42-205ENST00000465073 A0A1W2PPM0 123 aa10.24□□□□□ -0.77
USP42-205ENST00000465073 SMIM6P0DI80 62 aa10.24□□□□□ -0.77
USP42-205ENST00000465073 C1orf64Q8NEQ6 169 aa10.2□□□□□ -0.78
USP42-205ENST00000465073 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
USP42-205ENST00000465073 LCA10Q71F78 164 aa10.18□□□□□ -0.78
USP42-205ENST00000465073 KRTAP10-5P60370 271 aa10.16□□□□□ -0.78
USP42-205ENST00000465073 MUC12Q9UKN1 5478 aa10.14□□□□□ -0.79
USP42-205ENST00000465073 UBL5Q9BZL1 73 aa10.13□□□□□ -0.79
USP42-205ENST00000465073 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
USP42-205ENST00000465073 SPCS1Q9Y6A9 102 aa10.06□□□□□ -0.8
USP42-205ENST00000465073 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
USP42-205ENST00000465073 KRTAP20-1Q3LI63 56 aa10.04□□□□□ -0.8
USP42-205ENST00000465073 KRTAP5-9P26371 169 aa10.03□□□□□ -0.8
USP42-205ENST00000465073 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
USP42-205ENST00000465073 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
USP42-205ENST00000465073 PRO0461Q9UI25 63 aa9.92□□□□□ -0.82
USP42-205ENST00000465073 KMT2DO14686 5537 aa9.92□□□□□ -0.82
USP42-205ENST00000465073 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
USP42-205ENST00000465073 MDN1Q9NU22 5596 aa9.85□□□□□ -0.83
USP42-205ENST00000465073 A0A087WVE0 104 aa9.85□□□□□ -0.83
USP42-205ENST00000465073 K7EP34 96 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms