RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 C8orf87E5RJ46 101 aa13.08□□□□□ -0.32
U2AF1-206ENST00000464750 M0R143 59 aa13.05□□□□□ -0.32
U2AF1-206ENST00000464750 FAM236DA0A1B0GTK5 79 aa13.04□□□□□ -0.32
U2AF1-206ENST00000464750 FAM236CP0DP71 79 aa13.04□□□□□ -0.32
U2AF1-206ENST00000464750 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
U2AF1-206ENST00000464750 NAA38Q9BRA0 125 aaKnown RBP13.04□□□□□ -0.32
U2AF1-206ENST00000464750 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
U2AF1-206ENST00000464750 J3KT08 172 aa13.01□□□□□ -0.33
U2AF1-206ENST00000464750 HRES1P13985 223 aa13.01□□□□□ -0.33
U2AF1-206ENST00000464750 Q6ZQT0 140 aa13□□□□□ -0.33
U2AF1-206ENST00000464750 RBM12B-AS1Q9P1G2 102 aa12.99□□□□□ -0.33
U2AF1-206ENST00000464750 MPLKIPQ8TAP9 179 aa12.98□□□□□ -0.33
U2AF1-206ENST00000464750 KRTAP9-8Q9BYQ0 159 aa12.98□□□□□ -0.33
U2AF1-206ENST00000464750 JMJD7-PLA2G4BH0Y9G9 81 aa12.96□□□□□ -0.33
U2AF1-206ENST00000464750 LOC110117498A0A087WWA1 95 aa12.92□□□□□ -0.34
U2AF1-206ENST00000464750 NDUFB1O75438 58 aa12.91□□□□□ -0.34
U2AF1-206ENST00000464750 SMIM6P0DI80 62 aa12.91□□□□□ -0.34
U2AF1-206ENST00000464750 ZCCHC13Q8WW36 166 aaKnown RBP12.91□□□□□ -0.34
U2AF1-206ENST00000464750 A0A1B0GW54 56 aa12.87□□□□□ -0.35
U2AF1-206ENST00000464750 PDE6GP18545 87 aa12.86□□□□□ -0.35
U2AF1-206ENST00000464750 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
U2AF1-206ENST00000464750 C14orf132Q9NPU4 83 aa12.86□□□□□ -0.35
U2AF1-206ENST00000464750 A8MWP4 228 aa12.85□□□□□ -0.35
U2AF1-206ENST00000464750 Q8N9P0 234 aaPredicted RBP12.84□□□□□ -0.35
U2AF1-206ENST00000464750 C8orf17Q9NRJ1 99 aa12.84□□□□□ -0.35
U2AF1-206ENST00000464750 MT2AP02795 61 aa12.81□□□□□ -0.36
U2AF1-206ENST00000464750 USH2AO75445 5202 aa12.8□□□□□ -0.36
U2AF1-206ENST00000464750 IGKV3D-7A0A0C4DH55 119 aa12.8□□□□□ -0.36
U2AF1-206ENST00000464750 SPINK7P58062 85 aa12.8□□□□□ -0.36
U2AF1-206ENST00000464750 BATFQ16520 125 aa12.79□□□□□ -0.36
U2AF1-206ENST00000464750 MTURNQ8N3F0 131 aa12.78□□□□□ -0.36
U2AF1-206ENST00000464750 TSTD3H0UI37 97 aa12.77□□□□□ -0.37
U2AF1-206ENST00000464750 Q6ZVQ6 151 aa12.73□□□□□ -0.37
U2AF1-206ENST00000464750 SSPOA2VEC9 5147 aa12.73□□□□□ -0.37
U2AF1-206ENST00000464750 NREPQ16612 68 aa12.72□□□□□ -0.37
U2AF1-206ENST00000464750 MT1FP04733 61 aa12.71□□□□□ -0.37
U2AF1-206ENST00000464750 PRR15Q8IV56 129 aa12.71□□□□□ -0.37
U2AF1-206ENST00000464750 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
U2AF1-206ENST00000464750 MMP24-AS1A0A0U1RRL7 71 aa12.65□□□□□ -0.38
U2AF1-206ENST00000464750 H3BT86 120 aa12.65□□□□□ -0.38
U2AF1-206ENST00000464750 C9orf118A6NHY6 69 aa12.64□□□□□ -0.39
U2AF1-206ENST00000464750 KRTAP10-10P60014 251 aa12.63□□□□□ -0.39
U2AF1-206ENST00000464750 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
U2AF1-206ENST00000464750 MRPL34Q9BQ48 92 aaKnown RBP12.62□□□□□ -0.39
U2AF1-206ENST00000464750 A0A1W2PPM0 123 aa12.6□□□□□ -0.39
U2AF1-206ENST00000464750 TAX1BP3O14907 124 aa12.6□□□□□ -0.39
U2AF1-206ENST00000464750 K7EQZ3 153 aa12.59□□□□□ -0.39
U2AF1-206ENST00000464750 KRTAP9-3Q9BYQ3 159 aa12.57□□□□□ -0.4
U2AF1-206ENST00000464750 hDV103S1A0JD37 113 aa12.55□□□□□ -0.4
U2AF1-206ENST00000464750 LOC105371267A0A1B0GV96 52 aa12.52□□□□□ -0.41
U2AF1-206ENST00000464750 NDUFS5O43920 106 aa12.51□□□□□ -0.41
U2AF1-206ENST00000464750 BPY2O14599 106 aa12.5□□□□□ -0.41
U2AF1-206ENST00000464750 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.44□□□□□ -0.42
U2AF1-206ENST00000464750 SPCS1Q9Y6A9 102 aa12.43□□□□□ -0.42
U2AF1-206ENST00000464750 FCGBPQ9Y6R7 5405 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-206ENST00000464750 Q8N9L7 120 aa12.39□□□□□ -0.43
U2AF1-206ENST00000464750 KRTAP19-1Q8IUB9 90 aa12.38□□□□□ -0.43
U2AF1-206ENST00000464750 IGKV2D-30A0A075B6S6 120 aa12.37□□□□□ -0.43
U2AF1-206ENST00000464750 IGKV2-30P06310 120 aa12.37□□□□□ -0.43
U2AF1-206ENST00000464750 H1FX-AS1Q4G0G2 97 aa12.36□□□□□ -0.43
U2AF1-206ENST00000464750 Q5W150 140 aa12.36□□□□□ -0.43
U2AF1-206ENST00000464750 C7orf65Q6ZTY9 151 aa12.35□□□□□ -0.43
U2AF1-206ENST00000464750 CASC2Q6XLA1 102 aa12.34□□□□□ -0.43
U2AF1-206ENST00000464750 KRTAP9-7A8MTY7 169 aa12.31□□□□□ -0.44
U2AF1-206ENST00000464750 HCG22E2RYF7 251 aa12.3□□□□□ -0.44
U2AF1-206ENST00000464750 COL5A1-AS1Q5SY13 56 aa12.24□□□□□ -0.45
U2AF1-206ENST00000464750 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
U2AF1-206ENST00000464750 PRO0461Q9UI25 63 aa12.23□□□□□ -0.45
U2AF1-206ENST00000464750 UBL5Q9BZL1 73 aa12.22□□□□□ -0.45
U2AF1-206ENST00000464750 CXCL6P80162 114 aa12.21□□□□□ -0.45
U2AF1-206ENST00000464750 K7EP34 96 aa12.19□□□□□ -0.46
U2AF1-206ENST00000464750 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
U2AF1-206ENST00000464750 KRTAP19-6Q3LI70 58 aa12.13□□□□□ -0.47
U2AF1-206ENST00000464750 MACF1Q9UPN3 7388 aaKnown RBP12.07□□□□□ -0.48
U2AF1-206ENST00000464750 GTF2H5Q6ZYL4 71 aa12□□□□□ -0.49
U2AF1-206ENST00000464750 C5orf47Q569G3 176 aa11.96□□□□□ -0.49
U2AF1-206ENST00000464750 SYNE2Q8WXH0 6885 aaKnown RBP11.95□□□□□ -0.5
U2AF1-206ENST00000464750 KRTAP3-1Q9BYR8 98 aa11.95□□□□□ -0.5
U2AF1-206ENST00000464750 F8W1H4 67 aa11.93□□□□□ -0.5
U2AF1-206ENST00000464750 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
U2AF1-206ENST00000464750 ETDBQ3ZM63 59 aa11.92□□□□□ -0.5
U2AF1-206ENST00000464750 S4R3F8 94 aa11.92□□□□□ -0.5
U2AF1-206ENST00000464750 C1orf64Q8NEQ6 169 aa11.91□□□□□ -0.5
U2AF1-206ENST00000464750 FAM236AA0A1B0GUQ0 79 aa11.86□□□□□ -0.51
U2AF1-206ENST00000464750 FAM236BA0A1B0GV22 79 aa11.86□□□□□ -0.51
U2AF1-206ENST00000464750 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
U2AF1-206ENST00000464750 LCA10Q71F78 164 aa11.83□□□□□ -0.52
U2AF1-206ENST00000464750 CSAG1Q6PB30 78 aa11.82□□□□□ -0.52
U2AF1-206ENST00000464750 CYP4F30PQ9H0H9 118 aa11.72□□□□□ -0.53
U2AF1-206ENST00000464750 TRAV22A0A0B4J277 110 aa11.69□□□□□ -0.54
U2AF1-206ENST00000464750 ACYP1P07311 99 aa11.66□□□□□ -0.54
U2AF1-206ENST00000464750 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
U2AF1-206ENST00000464750 SPRR2GQ9BYE4 73 aa11.64□□□□□ -0.55
U2AF1-206ENST00000464750 MT1BP07438 61 aa11.63□□□□□ -0.55
U2AF1-206ENST00000464750 Q5VV11 94 aa11.62□□□□□ -0.55
U2AF1-206ENST00000464750 ATP5EP2Q5VTU8 51 aa11.61□□□□□ -0.55
U2AF1-206ENST00000464750 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
U2AF1-206ENST00000464750 KLKP1Q107X0 134 aa11.59□□□□□ -0.55
U2AF1-206ENST00000464750 KRTAP19-8Q3LI54 63 aa11.59□□□□□ -0.55
U2AF1-206ENST00000464750 KRTAP6-3Q3LI67 103 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms