RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 U3KQA8 63 aa1.06□□□□□ -2.24
HMGXB4-205ENST00000464480 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
HMGXB4-205ENST00000464480 ABCA2Q9BZC7 2435 aa1.05□□□□□ -2.24
HMGXB4-205ENST00000464480 C2CD3Q4AC94 2353 aa1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 COL6A3P12111 3177 aa1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 CENPFP49454 3210 aa1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 HELZ2Q9BYK8 2649 aaKnown RBP1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 FASNP49327 2511 aaKnown RBP1.04□□□□□ -2.24
HMGXB4-205ENST00000464480 CHD7Q9P2D1 2997 aa1.03□□□□□ -2.24
HMGXB4-205ENST00000464480 BRCA2P51587 3418 aa1.03□□□□□ -2.24
HMGXB4-205ENST00000464480 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.25
HMGXB4-205ENST00000464480 TENM2Q9NT68 2774 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 CHD9Q3L8U1 2897 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 F8P00451 2351 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 HTN3P15516 51 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 DSPP15924 2871 aaKnown RBP1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 UNC80Q8N2C7 3258 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 TENM1Q9UKZ4 2725 aa1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 FLNBO75369 2602 aaKnown RBP1.02□□□□□ -2.25
HMGXB4-205ENST00000464480 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 CEP295Q9C0D2 2601 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 USP24Q9UPU5 2620 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 CCDC168Q8NDH2 2452 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 CREBBPQ92793 2442 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 SZT2Q5T011 3432 aa1.01□□□□□ -2.25
HMGXB4-205ENST00000464480 PRUNE2Q8WUY3 3088 aa1□□□□□ -2.25
HMGXB4-205ENST00000464480 TRANK1O15050 2925 aa1□□□□□ -2.25
HMGXB4-205ENST00000464480 ANKHD1Q8IWZ3 2542 aaKnown RBP1□□□□□ -2.25
HMGXB4-205ENST00000464480 ANKRD11Q6UB99 2663 aaPredicted RBP1□□□□□ -2.25
HMGXB4-205ENST00000464480 LAMA2P24043 3122 aaKnown RBP1□□□□□ -2.25
HMGXB4-205ENST00000464480 MYO9AB2RTY4 2548 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 ZFYVE26Q68DK2 2539 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 SPTAN1Q13813 2472 aaKnown RBP0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 ZNF292O60281 2723 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 DNAH12Q6ZR08 3092 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 TNP1P09430 55 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 VCANP13611 3396 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 MUC3AQ02505 3323 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 SPG11Q96JI7 2443 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 REV3LO60673 3130 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 CHD6Q8TD26 2715 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 CFAP54Q96N23 3096 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 COL6A5A8TX70 2615 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 CDH23Q9H251 3354 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 ABCA12Q86UK0 2595 aa0.99□□□□□ -2.25
HMGXB4-205ENST00000464480 PTPN13Q12923 2485 aa0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 DOPEY1Q5JWR5 2465 aa0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 ASH1LQ9NR48 2969 aaKnown RBP0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 RPS29P62273 56 aaKnown RBP0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 MAST4O15021 2626 aa0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 C5orf42Q9H799 3197 aa0.98□□□□□ -2.25
HMGXB4-205ENST00000464480 LRRK2Q5S007 2527 aa0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 TLN1Q9Y490 2541 aaKnown RBP0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 SPTBN5Q9NRC6 3674 aaKnown RBP0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 XIRP2A4UGR9 3374 aa0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 MYO18BQ8IUG5 2567 aa0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 DEFB135Q30KP9 77 aa0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 MTORP42345 2549 aa0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 DMBT1Q9UGM3 2413 aaPredicted RBP0.97□□□□□ -2.25
HMGXB4-205ENST00000464480 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.25
HMGXB4-205ENST00000464480 CELSR2Q9HCU4 2923 aa0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 SONP18583 2426 aaKnown RBP0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 HECTD1Q9ULT8 2610 aa0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 ITPR1Q14643 2758 aa0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 EYSQ5T1H1 3165 aa0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 PRRC2CQ9Y520 2896 aaKnown RBP0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 UNC79Q9P2D8 2635 aa0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 MAP1AP78559 2803 aaPredicted RBP0.96□□□□□ -2.26
HMGXB4-205ENST00000464480 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 GCN1Q92616 2671 aaKnown RBP0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 USP9YO00507 2555 aaPredicted RBP0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 C9orf92A6NGG3 77 aa0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 HIVEP3Q5T1R4 2406 aa0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 USP9XQ93008 2570 aaPredicted RBP0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 SETD2Q9BYW2 2564 aaPredicted RBP0.95□□□□□ -2.26
HMGXB4-205ENST00000464480 IGSF10Q6WRI0 2623 aa0.94□□□□□ -2.26
HMGXB4-205ENST00000464480 DEFB4AO15263 64 aa0.94□□□□□ -2.26
HMGXB4-205ENST00000464480 DMXL1Q9Y485 3027 aa0.94□□□□□ -2.26
HMGXB4-205ENST00000464480 CFAP47Q6ZTR5 3102 aa0.94□□□□□ -2.26
HMGXB4-205ENST00000464480 DCHS1Q96JQ0 3298 aa0.94□□□□□ -2.26
HMGXB4-205ENST00000464480 SMR3AQ99954 134 aa0.93□□□□□ -2.26
HMGXB4-205ENST00000464480 VWFP04275 2813 aa0.93□□□□□ -2.26
HMGXB4-205ENST00000464480 WDFY4Q6ZS81 3184 aa0.93□□□□□ -2.26
HMGXB4-205ENST00000464480 TRIOO75962 3097 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 FREM2Q5SZK8 3169 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 VPS13AQ96RL7 3174 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 DMXL2Q8TDJ6 3036 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 USP34Q70CQ2 3546 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 NBEAQ8NFP9 2946 aa0.92□□□□□ -2.26
HMGXB4-205ENST00000464480 ZZEF1O43149 2961 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 CRYBG3Q68DQ2 2970 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 COL12A1Q99715 3063 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 POLQO75417 2590 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 SETXQ7Z333 2677 aaKnown RBP0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 KALRNO60229 2985 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 CFAP46Q8IYW2 2715 aa0.91□□□□□ -2.26
HMGXB4-205ENST00000464480 FRYQ5TBA9 3013 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms