RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 H0Y9P7 68 aa11.79□□□□□ -0.52
GCOM1-204ENST00000463717 SERP1Q9Y6X1 66 aa11.79□□□□□ -0.52
GCOM1-204ENST00000463717 C8orf87E5RJ46 101 aa11.78□□□□□ -0.52
GCOM1-204ENST00000463717 VPS13BQ7Z7G8 4022 aa11.78□□□□□ -0.52
GCOM1-204ENST00000463717 PKHD1P08F94 4074 aa11.77□□□□□ -0.52
GCOM1-204ENST00000463717 MRPL34Q9BQ48 92 aaKnown RBP11.77□□□□□ -0.53
GCOM1-204ENST00000463717 TRAV22A0A0B4J277 110 aa11.76□□□□□ -0.53
GCOM1-204ENST00000463717 PLA2G1BP04054 148 aaKnown RBP11.76□□□□□ -0.53
GCOM1-204ENST00000463717 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
GCOM1-204ENST00000463717 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
GCOM1-204ENST00000463717 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
GCOM1-204ENST00000463717 C4orf48Q5BLP8 95 aa11.71□□□□□ -0.53
GCOM1-204ENST00000463717 RYR2Q92736 4967 aa11.71□□□□□ -0.54
GCOM1-204ENST00000463717 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
GCOM1-204ENST00000463717 SPINK1P00995 79 aa11.68□□□□□ -0.54
GCOM1-204ENST00000463717 NDUFS5O43920 106 aa11.67□□□□□ -0.54
GCOM1-204ENST00000463717 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
GCOM1-204ENST00000463717 OXTP01178 125 aa11.65□□□□□ -0.54
GCOM1-204ENST00000463717 NOTCH2NLQ7Z3S9 236 aa11.65□□□□□ -0.54
GCOM1-204ENST00000463717 C1orf64Q8NEQ6 169 aa11.65□□□□□ -0.54
GCOM1-204ENST00000463717 SMR3BP02814 79 aaPredicted RBP11.65□□□□□ -0.55
GCOM1-204ENST00000463717 SPAG11AQ6PDA7 123 aa11.64□□□□□ -0.55
GCOM1-204ENST00000463717 APOBP04114 4563 aaKnown RBP11.63□□□□□ -0.55
GCOM1-204ENST00000463717 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
GCOM1-204ENST00000463717 LINC00304Q8N9R0 145 aa11.61□□□□□ -0.55
GCOM1-204ENST00000463717 SPANXA2-OT1Q8N9U9 137 aa11.61□□□□□ -0.55
GCOM1-204ENST00000463717 LINC00313P59037 77 aa11.6□□□□□ -0.55
GCOM1-204ENST00000463717 CYP4F30PQ9H0H9 118 aa11.6□□□□□ -0.55
GCOM1-204ENST00000463717 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
GCOM1-204ENST00000463717 SMIM26A0A096LP01 95 aa11.52□□□□□ -0.56
GCOM1-204ENST00000463717 Q8N9P0 234 aaPredicted RBP11.52□□□□□ -0.57
GCOM1-204ENST00000463717 LOC101927531A0A1B0GV80 90 aa11.5□□□□□ -0.57
GCOM1-204ENST00000463717 KMT2CQ8NEZ4 4911 aaKnown RBP11.49□□□□□ -0.57
GCOM1-204ENST00000463717 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
GCOM1-204ENST00000463717 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
GCOM1-204ENST00000463717 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
GCOM1-204ENST00000463717 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.57
GCOM1-204ENST00000463717 IGLV7-46A0A075B6I9 117 aa11.43□□□□□ -0.58
GCOM1-204ENST00000463717 PRR4Q16378 134 aa11.42□□□□□ -0.58
GCOM1-204ENST00000463717 Q5W150 140 aa11.41□□□□□ -0.58
GCOM1-204ENST00000463717 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
GCOM1-204ENST00000463717 FAT1Q14517 4588 aa11.4□□□□□ -0.58
GCOM1-204ENST00000463717 FP248Q71RG6 208 aaPredicted RBP11.36□□□□□ -0.59
GCOM1-204ENST00000463717 Q5VSD8 79 aa11.33□□□□□ -0.6
GCOM1-204ENST00000463717 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
GCOM1-204ENST00000463717 C4orf26Q17RF5 130 aa11.26□□□□□ -0.61
GCOM1-204ENST00000463717 COA5Q86WW8 74 aa11.23□□□□□ -0.61
GCOM1-204ENST00000463717 HSPG2P98160 4391 aa11.22□□□□□ -0.61
GCOM1-204ENST00000463717 RETNLBQ9BQ08 111 aa11.21□□□□□ -0.61
GCOM1-204ENST00000463717 Q1T7F1 81 aa11.2□□□□□ -0.62
GCOM1-204ENST00000463717 V9GYY9 64 aa11.2□□□□□ -0.62
GCOM1-204ENST00000463717 KRTAP10-8P60410 259 aa11.19□□□□□ -0.62
GCOM1-204ENST00000463717 MPLKIPQ8TAP9 179 aa11.19□□□□□ -0.62
GCOM1-204ENST00000463717 RYR3Q15413 4870 aa11.19□□□□□ -0.62
GCOM1-204ENST00000463717 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
GCOM1-204ENST00000463717 HRES1P13985 223 aa11.16□□□□□ -0.62
GCOM1-204ENST00000463717 FLG2Q5D862 2391 aaPredicted RBP11.15□□□□□ -0.62
GCOM1-204ENST00000463717 A8MUU9 505 aa11.15□□□□□ -0.62
GCOM1-204ENST00000463717 RYR1P21817 5038 aa11.13□□□□□ -0.63
GCOM1-204ENST00000463717 Q8N1X5 172 aa11.13□□□□□ -0.63
GCOM1-204ENST00000463717 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
GCOM1-204ENST00000463717 IGKV2D-30A0A075B6S6 120 aa11.11□□□□□ -0.63
GCOM1-204ENST00000463717 C9orf92A6NGG3 77 aa11.11□□□□□ -0.63
GCOM1-204ENST00000463717 ACYP2P14621 99 aa11.11□□□□□ -0.63
GCOM1-204ENST00000463717 C7orf65Q6ZTY9 151 aa11.11□□□□□ -0.63
GCOM1-204ENST00000463717 TNXBP22105 4242 aa11.07□□□□□ -0.64
GCOM1-204ENST00000463717 Q75L30 129 aa11.02□□□□□ -0.64
GCOM1-204ENST00000463717 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
GCOM1-204ENST00000463717 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
GCOM1-204ENST00000463717 LRP1Q07954 4544 aaKnown RBP10.95□□□□□ -0.66
GCOM1-204ENST00000463717 CHKB-CPT1BH3BT56 60 aa10.95□□□□□ -0.66
GCOM1-204ENST00000463717 A8MUN3 132 aa10.93□□□□□ -0.66
GCOM1-204ENST00000463717 PSPHP1O15172 72 aa10.92□□□□□ -0.66
GCOM1-204ENST00000463717 MT1HL1P0DM35 61 aa10.92□□□□□ -0.66
GCOM1-204ENST00000463717 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
GCOM1-204ENST00000463717 PRR15LQ9BU68 103 aa10.88□□□□□ -0.67
GCOM1-204ENST00000463717 KIAA1109Q2LD37 5005 aa10.88□□□□□ -0.67
GCOM1-204ENST00000463717 Q5VV11 94 aa10.86□□□□□ -0.67
GCOM1-204ENST00000463717 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
GCOM1-204ENST00000463717 RPL37P61927 97 aaKnown RBP10.82□□□□□ -0.68
GCOM1-204ENST00000463717 SPINK7P58062 85 aa10.81□□□□□ -0.68
GCOM1-204ENST00000463717 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
GCOM1-204ENST00000463717 BRK1Q8WUW1 75 aa10.81□□□□□ -0.68
GCOM1-204ENST00000463717 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
GCOM1-204ENST00000463717 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
GCOM1-204ENST00000463717 EPPK1P58107 5090 aaKnown RBP10.77□□□□□ -0.69
GCOM1-204ENST00000463717 XP32Q5T750 250 aa10.76□□□□□ -0.69
GCOM1-204ENST00000463717 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
GCOM1-204ENST00000463717 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
GCOM1-204ENST00000463717 TPRXLQ17RH7 258 aa10.66□□□□□ -0.7
GCOM1-204ENST00000463717 COX6B2Q6YFQ2 88 aa10.65□□□□□ -0.7
GCOM1-204ENST00000463717 A6NED7 52 aa10.63□□□□□ -0.71
GCOM1-204ENST00000463717 A0A1B0GU69 56 aa10.62□□□□□ -0.71
GCOM1-204ENST00000463717 KRTAP3-1Q9BYR8 98 aa10.6□□□□□ -0.71
GCOM1-204ENST00000463717 KRTAP4-5Q9BYR2 181 aa10.58□□□□□ -0.72
GCOM1-204ENST00000463717 CDC42SE1Q9NRR8 79 aa10.53□□□□□ -0.72
GCOM1-204ENST00000463717 SEC61GP60059 68 aa10.47□□□□□ -0.73
GCOM1-204ENST00000463717 LCA10Q71F78 164 aa10.46□□□□□ -0.74
GCOM1-204ENST00000463717 J3QL48 77 aa10.43□□□□□ -0.74
GCOM1-204ENST00000463717 UQCR11O14957 56 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms