RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
PTPRF-210ENST00000463041 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
PTPRF-210ENST00000463041 JMJD7-PLA2G4BH0Y9G9 81 aa3.67□□□□□ -1.82
PTPRF-210ENST00000463041 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
PTPRF-210ENST00000463041 Q6ZQT0 140 aa3.67□□□□□ -1.82
PTPRF-210ENST00000463041 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
PTPRF-210ENST00000463041 M0R143 59 aa3.66□□□□□ -1.82
PTPRF-210ENST00000463041 NDUFB1O75438 58 aa3.66□□□□□ -1.82
PTPRF-210ENST00000463041 PDE6GP18545 87 aa3.66□□□□□ -1.82
PTPRF-210ENST00000463041 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
PTPRF-210ENST00000463041 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
PTPRF-210ENST00000463041 HRES1P13985 223 aa3.65□□□□□ -1.83
PTPRF-210ENST00000463041 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
PTPRF-210ENST00000463041 MTURNQ8N3F0 131 aa3.64□□□□□ -1.83
PTPRF-210ENST00000463041 ZCCHC13Q8WW36 166 aaKnown RBP3.64□□□□□ -1.83
PTPRF-210ENST00000463041 Q8N9P0 234 aaPredicted RBP3.63□□□□□ -1.83
PTPRF-210ENST00000463041 USH2AO75445 5202 aa3.62□□□□□ -1.83
PTPRF-210ENST00000463041 A8MWP4 228 aa3.62□□□□□ -1.83
PTPRF-210ENST00000463041 SPINK7P58062 85 aa3.62□□□□□ -1.83
PTPRF-210ENST00000463041 LYRM7Q5U5X0 104 aa3.62□□□□□ -1.83
PTPRF-210ENST00000463041 NAA38Q9BRA0 125 aaKnown RBP3.62□□□□□ -1.83
PTPRF-210ENST00000463041 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
PTPRF-210ENST00000463041 SMIM6P0DI80 62 aa3.6□□□□□ -1.83
PTPRF-210ENST00000463041 NREPQ16612 68 aa3.6□□□□□ -1.83
PTPRF-210ENST00000463041 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
PTPRF-210ENST00000463041 IGKV3D-7A0A0C4DH55 119 aa3.59□□□□□ -1.83
PTPRF-210ENST00000463041 MT2AP02795 61 aa3.59□□□□□ -1.83
PTPRF-210ENST00000463041 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
PTPRF-210ENST00000463041 C14orf132Q9NPU4 83 aa3.59□□□□□ -1.83
PTPRF-210ENST00000463041 TSTD3H0UI37 97 aa3.58□□□□□ -1.84
PTPRF-210ENST00000463041 Q6ZVQ6 151 aa3.58□□□□□ -1.84
PTPRF-210ENST00000463041 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
PTPRF-210ENST00000463041 C9orf118A6NHY6 69 aa3.56□□□□□ -1.84
PTPRF-210ENST00000463041 H3BT86 120 aa3.55□□□□□ -1.84
PTPRF-210ENST00000463041 MT1FP04733 61 aa3.55□□□□□ -1.84
PTPRF-210ENST00000463041 BATFQ16520 125 aa3.55□□□□□ -1.84
PTPRF-210ENST00000463041 TMEM254Q8TBM7 123 aa3.55□□□□□ -1.84
PTPRF-210ENST00000463041 MRPL34Q9BQ48 92 aaKnown RBP3.55□□□□□ -1.84
PTPRF-210ENST00000463041 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
PTPRF-210ENST00000463041 hDV103S1A0JD37 113 aa3.54□□□□□ -1.84
PTPRF-210ENST00000463041 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
PTPRF-210ENST00000463041 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
PTPRF-210ENST00000463041 MMP24-AS1A0A0U1RRL7 71 aa3.53□□□□□ -1.84
PTPRF-210ENST00000463041 A0A1W2PPM0 123 aa3.53□□□□□ -1.84
PTPRF-210ENST00000463041 LCE2BO14633 110 aa3.53□□□□□ -1.84
PTPRF-210ENST00000463041 TAX1BP3O14907 124 aa3.53□□□□□ -1.84
PTPRF-210ENST00000463041 BPY2O14599 106 aa3.52□□□□□ -1.85
PTPRF-210ENST00000463041 K7EQZ3 153 aa3.51□□□□□ -1.85
PTPRF-210ENST00000463041 NDUFS5O43920 106 aa3.51□□□□□ -1.85
PTPRF-210ENST00000463041 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
PTPRF-210ENST00000463041 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
PTPRF-210ENST00000463041 LOC105371267A0A1B0GV96 52 aa3.49□□□□□ -1.85
PTPRF-210ENST00000463041 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
PTPRF-210ENST00000463041 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
PTPRF-210ENST00000463041 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
PTPRF-210ENST00000463041 Q5W150 140 aa3.47□□□□□ -1.85
PTPRF-210ENST00000463041 CASC2Q6XLA1 102 aa3.47□□□□□ -1.85
PTPRF-210ENST00000463041 C7orf65Q6ZTY9 151 aa3.47□□□□□ -1.85
PTPRF-210ENST00000463041 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
PTPRF-210ENST00000463041 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
PTPRF-210ENST00000463041 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
PTPRF-210ENST00000463041 HCG22E2RYF7 251 aa3.45□□□□□ -1.86
PTPRF-210ENST00000463041 SMCPP49901 116 aaPredicted RBP3.45□□□□□ -1.86
PTPRF-210ENST00000463041 CXCL6P80162 114 aa3.45□□□□□ -1.86
PTPRF-210ENST00000463041 Q8N9L7 120 aa3.45□□□□□ -1.86
PTPRF-210ENST00000463041 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
PTPRF-210ENST00000463041 UBL5Q9BZL1 73 aa3.44□□□□□ -1.86
PTPRF-210ENST00000463041 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
PTPRF-210ENST00000463041 PRO0461Q9UI25 63 aa3.42□□□□□ -1.86
PTPRF-210ENST00000463041 C4orf26Q17RF5 130 aa3.41□□□□□ -1.86
PTPRF-210ENST00000463041 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
PTPRF-210ENST00000463041 K7EP34 96 aa3.4□□□□□ -1.87
PTPRF-210ENST00000463041 TP53AIP1Q9HCN2 124 aa3.39□□□□□ -1.87
PTPRF-210ENST00000463041 F8W1H4 67 aa3.38□□□□□ -1.87
PTPRF-210ENST00000463041 GTF2H5Q6ZYL4 71 aa3.38□□□□□ -1.87
PTPRF-210ENST00000463041 KRTAP3-1Q9BYR8 98 aa3.37□□□□□ -1.87
PTPRF-210ENST00000463041 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
PTPRF-210ENST00000463041 CSAG1Q6PB30 78 aa3.36□□□□□ -1.87
PTPRF-210ENST00000463041 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
PTPRF-210ENST00000463041 S4R3F8 94 aa3.35□□□□□ -1.87
PTPRF-210ENST00000463041 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
PTPRF-210ENST00000463041 ETDBQ3ZM63 59 aa3.34□□□□□ -1.87
PTPRF-210ENST00000463041 FAM236AA0A1B0GUQ0 79 aa3.33□□□□□ -1.88
PTPRF-210ENST00000463041 FAM236BA0A1B0GV22 79 aa3.33□□□□□ -1.88
PTPRF-210ENST00000463041 LCA10Q71F78 164 aa3.32□□□□□ -1.88
PTPRF-210ENST00000463041 ACYP1P07311 99 aa3.31□□□□□ -1.88
PTPRF-210ENST00000463041 CYP4F30PQ9H0H9 118 aa3.31□□□□□ -1.88
PTPRF-210ENST00000463041 PCP4L1A6NKN8 68 aa3.3□□□□□ -1.88
PTPRF-210ENST00000463041 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
PTPRF-210ENST00000463041 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
PTPRF-210ENST00000463041 TRAV22A0A0B4J277 110 aa3.28□□□□□ -1.88
PTPRF-210ENST00000463041 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
PTPRF-210ENST00000463041 Q5VV11 94 aa3.28□□□□□ -1.88
PTPRF-210ENST00000463041 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
PTPRF-210ENST00000463041 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
PTPRF-210ENST00000463041 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
PTPRF-210ENST00000463041 FAM240AA0A1B0GVK7 77 aa3.26□□□□□ -1.89
PTPRF-210ENST00000463041 A6NN06 94 aa3.26□□□□□ -1.89
PTPRF-210ENST00000463041 UQCRQO14949 82 aa3.26□□□□□ -1.89
PTPRF-210ENST00000463041 MT1BP07438 61 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms