RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 DMAC1Q96GE9 116 aa6.71□□□□□ -1.33
RBM39-223ENST00000463004 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
RBM39-223ENST00000463004 RELNP78509 3460 aa6.7□□□□□ -1.34
RBM39-223ENST00000463004 Q75L30 129 aa6.69□□□□□ -1.34
RBM39-223ENST00000463004 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
RBM39-223ENST00000463004 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
RBM39-223ENST00000463004 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
RBM39-223ENST00000463004 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.34
RBM39-223ENST00000463004 CDC42SE1Q9NRR8 79 aa6.65□□□□□ -1.34
RBM39-223ENST00000463004 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
RBM39-223ENST00000463004 S4R3F8 94 aa6.64□□□□□ -1.35
RBM39-223ENST00000463004 DMDP11532 3685 aa6.63□□□□□ -1.35
RBM39-223ENST00000463004 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
RBM39-223ENST00000463004 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
RBM39-223ENST00000463004 WDFY3Q8IZQ1 3526 aa6.61□□□□□ -1.35
RBM39-223ENST00000463004 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
RBM39-223ENST00000463004 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
RBM39-223ENST00000463004 LAMA5O15230 3695 aa6.59□□□□□ -1.35
RBM39-223ENST00000463004 A0A1B0GU33 70 aa6.59□□□□□ -1.35
RBM39-223ENST00000463004 A8MUU9 505 aa6.59□□□□□ -1.36
RBM39-223ENST00000463004 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
RBM39-223ENST00000463004 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
RBM39-223ENST00000463004 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
RBM39-223ENST00000463004 ZFHX4Q86UP3 3567 aa6.54□□□□□ -1.36
RBM39-223ENST00000463004 BSNQ9UPA5 3926 aa6.49□□□□□ -1.37
RBM39-223ENST00000463004 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
RBM39-223ENST00000463004 VWFP04275 2813 aa6.48□□□□□ -1.37
RBM39-223ENST00000463004 Q5VV11 94 aa6.46□□□□□ -1.37
RBM39-223ENST00000463004 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
RBM39-223ENST00000463004 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
RBM39-223ENST00000463004 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
RBM39-223ENST00000463004 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
RBM39-223ENST00000463004 M0R2T5 61 aa6.43□□□□□ -1.38
RBM39-223ENST00000463004 TPRXLQ17RH7 258 aa6.43□□□□□ -1.38
RBM39-223ENST00000463004 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
RBM39-223ENST00000463004 NBPF19A0A087WUL8 3843 aa6.41□□□□□ -1.38
RBM39-223ENST00000463004 KRTAP10-8P60410 259 aa6.41□□□□□ -1.38
RBM39-223ENST00000463004 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
RBM39-223ENST00000463004 A0A0D9SG42 100 aa6.39□□□□□ -1.39
RBM39-223ENST00000463004 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
RBM39-223ENST00000463004 R4GN34 69 aa6.38□□□□□ -1.39
RBM39-223ENST00000463004 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
RBM39-223ENST00000463004 FLG2Q5D862 2391 aaPredicted RBP6.36□□□□□ -1.39
RBM39-223ENST00000463004 XP32Q5T750 250 aa6.36□□□□□ -1.39
RBM39-223ENST00000463004 LCA10Q71F78 164 aa6.33□□□□□ -1.4
RBM39-223ENST00000463004 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
RBM39-223ENST00000463004 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
RBM39-223ENST00000463004 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
RBM39-223ENST00000463004 TGP01266 2768 aa6.3□□□□□ -1.4
RBM39-223ENST00000463004 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
RBM39-223ENST00000463004 M0QZ58 72 aa6.28□□□□□ -1.4
RBM39-223ENST00000463004 SPENQ96T58 3664 aaKnown RBP6.27□□□□□ -1.41
RBM39-223ENST00000463004 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
RBM39-223ENST00000463004 PKD1L1Q8TDX9 2849 aa6.19□□□□□ -1.42
RBM39-223ENST00000463004 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
RBM39-223ENST00000463004 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
RBM39-223ENST00000463004 ROMO1P60602 79 aa6.15□□□□□ -1.42
RBM39-223ENST00000463004 CSMD1Q96PZ7 3565 aa6.13□□□□□ -1.43
RBM39-223ENST00000463004 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
RBM39-223ENST00000463004 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
RBM39-223ENST00000463004 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
RBM39-223ENST00000463004 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
RBM39-223ENST00000463004 SVEP1Q4LDE5 3571 aa6.07□□□□□ -1.44
RBM39-223ENST00000463004 KRTAP10-4P60372 401 aaPredicted RBP6.05□□□□□ -1.44
RBM39-223ENST00000463004 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
RBM39-223ENST00000463004 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
RBM39-223ENST00000463004 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
RBM39-223ENST00000463004 A6NN06 94 aa5.98□□□□□ -1.45
RBM39-223ENST00000463004 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
RBM39-223ENST00000463004 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
RBM39-223ENST00000463004 A8MU10 97 aa5.94□□□□□ -1.46
RBM39-223ENST00000463004 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
RBM39-223ENST00000463004 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
RBM39-223ENST00000463004 H0YAA0 97 aa5.91□□□□□ -1.46
RBM39-223ENST00000463004 ZNF469Q96JG9 3925 aaPredicted RBP5.9□□□□□ -1.47
RBM39-223ENST00000463004 CUBNO60494 3623 aa5.88□□□□□ -1.47
RBM39-223ENST00000463004 H3BS24 57 aa5.83□□□□□ -1.48
RBM39-223ENST00000463004 TNP1P09430 55 aa5.82□□□□□ -1.48
RBM39-223ENST00000463004 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
RBM39-223ENST00000463004 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
RBM39-223ENST00000463004 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
RBM39-223ENST00000463004 VPS13CQ709C8 3753 aa5.78□□□□□ -1.48
RBM39-223ENST00000463004 P0C880 135 aa5.77□□□□□ -1.49
RBM39-223ENST00000463004 VPS13DQ5THJ4 4388 aa5.76□□□□□ -1.49
RBM39-223ENST00000463004 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
RBM39-223ENST00000463004 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
RBM39-223ENST00000463004 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
RBM39-223ENST00000463004 PLECQ15149 4684 aaKnown RBP5.7□□□□□ -1.5
RBM39-223ENST00000463004 DNAH1Q9P2D7 4330 aa5.7□□□□□ -1.5
RBM39-223ENST00000463004 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
RBM39-223ENST00000463004 ANK2Q01484 3957 aa5.68□□□□□ -1.5
RBM39-223ENST00000463004 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
RBM39-223ENST00000463004 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
RBM39-223ENST00000463004 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
RBM39-223ENST00000463004 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
RBM39-223ENST00000463004 DNAH3Q8TD57 4116 aa5.61□□□□□ -1.51
RBM39-223ENST00000463004 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
RBM39-223ENST00000463004 DNHD1Q96M86 4753 aa5.58□□□□□ -1.52
RBM39-223ENST00000463004 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
RBM39-223ENST00000463004 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms