RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 A0A1W2PPM0 123 aa12.12□□□□□ -0.47
LIMK2-206ENST00000462625 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
LIMK2-206ENST00000462625 A0A1B0GVX0 72 aa12.1□□□□□ -0.47
LIMK2-206ENST00000462625 C8orf87E5RJ46 101 aa12.09□□□□□ -0.47
LIMK2-206ENST00000462625 KRTAP16-1A8MUX0 517 aa12.07□□□□□ -0.48
LIMK2-206ENST00000462625 H3BT86 120 aa12.07□□□□□ -0.48
LIMK2-206ENST00000462625 NOTCH2NLQ7Z3S9 236 aa12.07□□□□□ -0.48
LIMK2-206ENST00000462625 NDUFB1O75438 58 aa12.06□□□□□ -0.48
LIMK2-206ENST00000462625 MT1HP80294 61 aa12.05□□□□□ -0.48
LIMK2-206ENST00000462625 KRTAP9-2Q9BYQ4 174 aa11.99□□□□□ -0.49
LIMK2-206ENST00000462625 NREPQ16612 68 aa11.98□□□□□ -0.49
LIMK2-206ENST00000462625 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
LIMK2-206ENST00000462625 COL5A1-AS1Q5SY13 56 aa11.97□□□□□ -0.49
LIMK2-206ENST00000462625 SPCS1Q9Y6A9 102 aa11.97□□□□□ -0.49
LIMK2-206ENST00000462625 A8MWP4 228 aa11.96□□□□□ -0.49
LIMK2-206ENST00000462625 M0R2T5 61 aa11.96□□□□□ -0.49
LIMK2-206ENST00000462625 C8orf17Q9NRJ1 99 aa11.89□□□□□ -0.51
LIMK2-206ENST00000462625 IGKV3D-7A0A0C4DH55 119 aa11.87□□□□□ -0.51
LIMK2-206ENST00000462625 PRR15Q8IV56 129 aa11.85□□□□□ -0.51
LIMK2-206ENST00000462625 Q8N9P0 234 aaPredicted RBP11.83□□□□□ -0.52
LIMK2-206ENST00000462625 ZCCHC13Q8WW36 166 aaKnown RBP11.83□□□□□ -0.52
LIMK2-206ENST00000462625 KRTAP10-6P60371 365 aaPredicted RBP11.81□□□□□ -0.52
LIMK2-206ENST00000462625 Q6ZVQ6 151 aa11.8□□□□□ -0.52
LIMK2-206ENST00000462625 FLGP20930 4061 aaPredicted RBP11.8□□□□□ -0.52
LIMK2-206ENST00000462625 K7EP34 96 aa11.79□□□□□ -0.52
LIMK2-206ENST00000462625 RBM12B-AS1Q9P1G2 102 aa11.79□□□□□ -0.52
LIMK2-206ENST00000462625 FAM236DA0A1B0GTK5 79 aa11.78□□□□□ -0.52
LIMK2-206ENST00000462625 FAM236CP0DP71 79 aa11.78□□□□□ -0.52
LIMK2-206ENST00000462625 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
LIMK2-206ENST00000462625 BPY2O14599 106 aa11.77□□□□□ -0.53
LIMK2-206ENST00000462625 LORP23490 312 aaPredicted RBP11.77□□□□□ -0.53
LIMK2-206ENST00000462625 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
LIMK2-206ENST00000462625 PCP4L1A6NKN8 68 aa11.76□□□□□ -0.53
LIMK2-206ENST00000462625 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
LIMK2-206ENST00000462625 MMP24-AS1A0A0U1RRL7 71 aa11.72□□□□□ -0.53
LIMK2-206ENST00000462625 K7EQZ3 153 aa11.72□□□□□ -0.53
LIMK2-206ENST00000462625 HRES1P13985 223 aa11.72□□□□□ -0.53
LIMK2-206ENST00000462625 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
LIMK2-206ENST00000462625 PRO0461Q9UI25 63 aa11.72□□□□□ -0.53
LIMK2-206ENST00000462625 MRPL34Q9BQ48 92 aaKnown RBP11.71□□□□□ -0.53
LIMK2-206ENST00000462625 hDV103S1A0JD37 113 aa11.69□□□□□ -0.54
LIMK2-206ENST00000462625 SPINK7P58062 85 aa11.69□□□□□ -0.54
LIMK2-206ENST00000462625 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
LIMK2-206ENST00000462625 UBL5Q9BZL1 73 aa11.65□□□□□ -0.54
LIMK2-206ENST00000462625 NDUFS5O43920 106 aa11.64□□□□□ -0.55
LIMK2-206ENST00000462625 F8W1H4 67 aa11.62□□□□□ -0.55
LIMK2-206ENST00000462625 LINC00846Q9NV44 126 aa11.59□□□□□ -0.55
LIMK2-206ENST00000462625 Q8N9L7 120 aa11.57□□□□□ -0.56
LIMK2-206ENST00000462625 CASC2Q6XLA1 102 aa11.56□□□□□ -0.56
LIMK2-206ENST00000462625 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
LIMK2-206ENST00000462625 KRTAP9-6A0A140TA67 174 aa11.54□□□□□ -0.56
LIMK2-206ENST00000462625 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
LIMK2-206ENST00000462625 HCG22E2RYF7 251 aa11.47□□□□□ -0.57
LIMK2-206ENST00000462625 CXCL6P80162 114 aa11.42□□□□□ -0.58
LIMK2-206ENST00000462625 KRTAP9-8Q9BYQ0 159 aa11.42□□□□□ -0.58
LIMK2-206ENST00000462625 IGKV2D-30A0A075B6S6 120 aa11.4□□□□□ -0.58
LIMK2-206ENST00000462625 IGKV2-30P06310 120 aa11.4□□□□□ -0.58
LIMK2-206ENST00000462625 Q5W150 140 aa11.4□□□□□ -0.58
LIMK2-206ENST00000462625 C7orf65Q6ZTY9 151 aa11.4□□□□□ -0.58
LIMK2-206ENST00000462625 CRCT1Q9UGL9 99 aa11.39□□□□□ -0.59
LIMK2-206ENST00000462625 FSIP2Q5CZC0 6907 aa11.36□□□□□ -0.59
LIMK2-206ENST00000462625 ACYP1P07311 99 aa11.32□□□□□ -0.6
LIMK2-206ENST00000462625 MT2AP02795 61 aa11.28□□□□□ -0.6
LIMK2-206ENST00000462625 H1FX-AS1Q4G0G2 97 aa11.28□□□□□ -0.6
LIMK2-206ENST00000462625 TP53AIP1Q9HCN2 124 aa11.26□□□□□ -0.61
LIMK2-206ENST00000462625 FAM240AA0A1B0GVK7 77 aa11.22□□□□□ -0.61
LIMK2-206ENST00000462625 KRTAP10-10P60014 251 aa11.22□□□□□ -0.61
LIMK2-206ENST00000462625 MT1FP04733 61 aa11.18□□□□□ -0.62
LIMK2-206ENST00000462625 C4orf26Q17RF5 130 aa11.17□□□□□ -0.62
LIMK2-206ENST00000462625 ATP5EP2Q5VTU8 51 aa11.17□□□□□ -0.62
LIMK2-206ENST00000462625 HIST1H4AP62805 103 aaKnown RBP11.09□□□□□ -0.63
LIMK2-206ENST00000462625 A0A1B0GV90 55 aa11.08□□□□□ -0.64
LIMK2-206ENST00000462625 KRTAP9-3Q9BYQ3 159 aa11.05□□□□□ -0.64
LIMK2-206ENST00000462625 LINC00643Q86TS7 51 aa11.02□□□□□ -0.65
LIMK2-206ENST00000462625 TRAV22A0A0B4J277 110 aa11.01□□□□□ -0.65
LIMK2-206ENST00000462625 C1orf64Q8NEQ6 169 aa11.01□□□□□ -0.65
LIMK2-206ENST00000462625 CYP4F30PQ9H0H9 118 aa10.96□□□□□ -0.65
LIMK2-206ENST00000462625 LOC101927531A0A1B0GV80 90 aa10.95□□□□□ -0.66
LIMK2-206ENST00000462625 LCE2BO14633 110 aa10.95□□□□□ -0.66
LIMK2-206ENST00000462625 UQCRQO14949 82 aa10.94□□□□□ -0.66
LIMK2-206ENST00000462625 KRTAP3-1Q9BYR8 98 aa10.94□□□□□ -0.66
LIMK2-206ENST00000462625 S4R3F8 94 aa10.93□□□□□ -0.66
LIMK2-206ENST00000462625 J3QR89 54 aa10.91□□□□□ -0.66
LIMK2-206ENST00000462625 USH2AO75445 5202 aa10.9□□□□□ -0.66
LIMK2-206ENST00000462625 ATOX1O00244 68 aa10.89□□□□□ -0.67
LIMK2-206ENST00000462625 C5orf47Q569G3 176 aa10.89□□□□□ -0.67
LIMK2-206ENST00000462625 A0A087WVE0 104 aa10.88□□□□□ -0.67
LIMK2-206ENST00000462625 H0Y9P7 68 aa10.86□□□□□ -0.67
LIMK2-206ENST00000462625 CSAG1Q6PB30 78 aa10.85□□□□□ -0.67
LIMK2-206ENST00000462625 LCA10Q71F78 164 aa10.81□□□□□ -0.68
LIMK2-206ENST00000462625 SSPOA2VEC9 5147 aa10.76□□□□□ -0.69
LIMK2-206ENST00000462625 FAM236AA0A1B0GUQ0 79 aa10.75□□□□□ -0.69
LIMK2-206ENST00000462625 FAM236BA0A1B0GV22 79 aa10.75□□□□□ -0.69
LIMK2-206ENST00000462625 KRTAP19-1Q8IUB9 90 aa10.72□□□□□ -0.69
LIMK2-206ENST00000462625 MP68P56378 58 aa10.71□□□□□ -0.69
LIMK2-206ENST00000462625 LINC00208Q96KT6 92 aa10.7□□□□□ -0.7
LIMK2-206ENST00000462625 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
LIMK2-206ENST00000462625 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
LIMK2-206ENST00000462625 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
LIMK2-206ENST00000462625 A8MUN3 132 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms