RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PSPHP1O15172 72 aa10.03□□□□□ -0.8
ACTB-207ENST00000462494 NOTCH2NLQ7Z3S9 236 aa10.03□□□□□ -0.8
ACTB-207ENST00000462494 DNHD1Q96M86 4753 aa10.02□□□□□ -0.8
ACTB-207ENST00000462494 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.81
ACTB-207ENST00000462494 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
ACTB-207ENST00000462494 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
ACTB-207ENST00000462494 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
ACTB-207ENST00000462494 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
ACTB-207ENST00000462494 CD164Q04900 197 aa9.97□□□□□ -0.81
ACTB-207ENST00000462494 DNAH5Q8TE73 4624 aa9.96□□□□□ -0.82
ACTB-207ENST00000462494 A8MUN3 132 aa9.93□□□□□ -0.82
ACTB-207ENST00000462494 COA5Q86WW8 74 aa9.93□□□□□ -0.82
ACTB-207ENST00000462494 V9GYY9 64 aa9.93□□□□□ -0.82
ACTB-207ENST00000462494 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
ACTB-207ENST00000462494 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
ACTB-207ENST00000462494 Q5W150 140 aa9.86□□□□□ -0.83
ACTB-207ENST00000462494 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
ACTB-207ENST00000462494 LIMD2Q9BT23 127 aa9.84□□□□□ -0.83
ACTB-207ENST00000462494 Q5VV11 94 aa9.83□□□□□ -0.84
ACTB-207ENST00000462494 PRR15LQ9BU68 103 aa9.83□□□□□ -0.84
ACTB-207ENST00000462494 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
ACTB-207ENST00000462494 KRTAP13-2Q52LG2 175 aa9.82□□□□□ -0.84
ACTB-207ENST00000462494 PKD1P98161 4303 aa9.82□□□□□ -0.84
ACTB-207ENST00000462494 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
ACTB-207ENST00000462494 LRP1BQ9NZR2 4599 aa9.81□□□□□ -0.84
ACTB-207ENST00000462494 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
ACTB-207ENST00000462494 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
ACTB-207ENST00000462494 Q6ZSA8 131 aa9.79□□□□□ -0.84
ACTB-207ENST00000462494 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
ACTB-207ENST00000462494 LINC00313P59037 77 aa9.79□□□□□ -0.84
ACTB-207ENST00000462494 HRES1P13985 223 aa9.78□□□□□ -0.84
ACTB-207ENST00000462494 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
ACTB-207ENST00000462494 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.84
ACTB-207ENST00000462494 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
ACTB-207ENST00000462494 RETNLBQ9BQ08 111 aa9.76□□□□□ -0.85
ACTB-207ENST00000462494 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
ACTB-207ENST00000462494 A8MU10 97 aa9.72□□□□□ -0.85
ACTB-207ENST00000462494 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
ACTB-207ENST00000462494 Q75L30 129 aa9.68□□□□□ -0.86
ACTB-207ENST00000462494 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
ACTB-207ENST00000462494 A6NED7 52 aa9.66□□□□□ -0.86
ACTB-207ENST00000462494 PLA2G1BP04054 148 aaKnown RBP9.66□□□□□ -0.86
ACTB-207ENST00000462494 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
ACTB-207ENST00000462494 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
ACTB-207ENST00000462494 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
ACTB-207ENST00000462494 ACYP2P14621 99 aa9.63□□□□□ -0.87
ACTB-207ENST00000462494 TYMSOSQ8TAI1 123 aa9.63□□□□□ -0.87
ACTB-207ENST00000462494 KRTAP16-1A8MUX0 517 aa9.61□□□□□ -0.87
ACTB-207ENST00000462494 IGKV2-30P06310 120 aa9.59□□□□□ -0.87
ACTB-207ENST00000462494 LCA10Q71F78 164 aa9.58□□□□□ -0.88
ACTB-207ENST00000462494 PKHD1P08F94 4074 aa9.57□□□□□ -0.88
ACTB-207ENST00000462494 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
ACTB-207ENST00000462494 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
ACTB-207ENST00000462494 IGKV2D-30A0A075B6S6 120 aa9.55□□□□□ -0.88
ACTB-207ENST00000462494 SPINK1P00995 79 aa9.55□□□□□ -0.88
ACTB-207ENST00000462494 PMAIP1Q13794 54 aa9.54□□□□□ -0.88
ACTB-207ENST00000462494 SPINK7P58062 85 aa9.51□□□□□ -0.89
ACTB-207ENST00000462494 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
ACTB-207ENST00000462494 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
ACTB-207ENST00000462494 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
ACTB-207ENST00000462494 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
ACTB-207ENST00000462494 SACSQ9NZJ4 4579 aa9.46□□□□□ -0.9
ACTB-207ENST00000462494 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
ACTB-207ENST00000462494 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
ACTB-207ENST00000462494 A0A1B0GU69 56 aa9.37□□□□□ -0.91
ACTB-207ENST00000462494 RPS29P62273 56 aaKnown RBP9.36□□□□□ -0.91
ACTB-207ENST00000462494 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
ACTB-207ENST00000462494 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
ACTB-207ENST00000462494 FAT1Q14517 4588 aa9.33□□□□□ -0.92
ACTB-207ENST00000462494 A6NN06 94 aa9.32□□□□□ -0.92
ACTB-207ENST00000462494 Q8N1X5 172 aa9.31□□□□□ -0.92
ACTB-207ENST00000462494 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
ACTB-207ENST00000462494 KTN1-AS1Q86SY8 53 aa9.28□□□□□ -0.92
ACTB-207ENST00000462494 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
ACTB-207ENST00000462494 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
ACTB-207ENST00000462494 PKHD1L1Q86WI1 4243 aa9.24□□□□□ -0.93
ACTB-207ENST00000462494 A8MUU9 505 aa9.2□□□□□ -0.94
ACTB-207ENST00000462494 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
ACTB-207ENST00000462494 SEC61GP60059 68 aa9.19□□□□□ -0.94
ACTB-207ENST00000462494 UQCR11O14957 56 aa9.18□□□□□ -0.94
ACTB-207ENST00000462494 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
ACTB-207ENST00000462494 SPATA8Q6RVD6 105 aa9.16□□□□□ -0.94
ACTB-207ENST00000462494 RYR2Q92736 4967 aa9.11□□□□□ -0.95
ACTB-207ENST00000462494 KMT2CQ8NEZ4 4911 aaKnown RBP9.07□□□□□ -0.96
ACTB-207ENST00000462494 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
ACTB-207ENST00000462494 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
ACTB-207ENST00000462494 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
ACTB-207ENST00000462494 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
ACTB-207ENST00000462494 TNXBP22105 4242 aa8.97□□□□□ -0.97
ACTB-207ENST00000462494 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
ACTB-207ENST00000462494 PRAC1Q96KF2 57 aa8.95□□□□□ -0.98
ACTB-207ENST00000462494 ADM2Q7Z4H4 148 aa8.94□□□□□ -0.98
ACTB-207ENST00000462494 Q5VSD8 79 aa8.93□□□□□ -0.98
ACTB-207ENST00000462494 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
ACTB-207ENST00000462494 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
ACTB-207ENST00000462494 HSPG2P98160 4391 aa8.89□□□□□ -0.99
ACTB-207ENST00000462494 H0YAA0 97 aa8.88□□□□□ -0.99
ACTB-207ENST00000462494 A0A1B0GU33 70 aa8.87□□□□□ -0.99
ACTB-207ENST00000462494 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
ACTB-207ENST00000462494 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms