RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 J3KT08 172 aa12.38□□□□□ -0.43
SMKR1-201ENST00000462322 PDE6GP18545 87 aa12.37□□□□□ -0.43
SMKR1-201ENST00000462322 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
SMKR1-201ENST00000462322 C14orf132Q9NPU4 83 aa12.36□□□□□ -0.43
SMKR1-201ENST00000462322 C9orf118A6NHY6 69 aa12.35□□□□□ -0.43
SMKR1-201ENST00000462322 A0A1B0GW54 56 aa12.34□□□□□ -0.43
SMKR1-201ENST00000462322 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
SMKR1-201ENST00000462322 FLGP20930 4061 aaPredicted RBP12.31□□□□□ -0.44
SMKR1-201ENST00000462322 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
SMKR1-201ENST00000462322 NDUFB1O75438 58 aa12.29□□□□□ -0.44
SMKR1-201ENST00000462322 KRTAP10-6P60371 365 aaPredicted RBP12.29□□□□□ -0.44
SMKR1-201ENST00000462322 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
SMKR1-201ENST00000462322 LORP23490 312 aaPredicted RBP12.27□□□□□ -0.45
SMKR1-201ENST00000462322 H3BT86 120 aa12.25□□□□□ -0.45
SMKR1-201ENST00000462322 MTURNQ8N3F0 131 aa12.23□□□□□ -0.45
SMKR1-201ENST00000462322 A8MWP4 228 aa12.22□□□□□ -0.45
SMKR1-201ENST00000462322 NREPQ16612 68 aa12.21□□□□□ -0.45
SMKR1-201ENST00000462322 IGKV3D-7A0A0C4DH55 119 aa12.17□□□□□ -0.46
SMKR1-201ENST00000462322 C8orf17Q9NRJ1 99 aa12.17□□□□□ -0.46
SMKR1-201ENST00000462322 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
SMKR1-201ENST00000462322 KRTAP9-6A0A140TA67 174 aa12.14□□□□□ -0.47
SMKR1-201ENST00000462322 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SMKR1-201ENST00000462322 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
SMKR1-201ENST00000462322 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
SMKR1-201ENST00000462322 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
SMKR1-201ENST00000462322 HRES1P13985 223 aa12.11□□□□□ -0.47
SMKR1-201ENST00000462322 PRR15Q8IV56 129 aa12.11□□□□□ -0.47
SMKR1-201ENST00000462322 RBM12B-AS1Q9P1G2 102 aa12.1□□□□□ -0.47
SMKR1-201ENST00000462322 COL5A1-AS1Q5SY13 56 aa12.08□□□□□ -0.48
SMKR1-201ENST00000462322 Q6ZVQ6 151 aa12.08□□□□□ -0.48
SMKR1-201ENST00000462322 MPLKIPQ8TAP9 179 aa12.07□□□□□ -0.48
SMKR1-201ENST00000462322 FSIP2Q5CZC0 6907 aa12.02□□□□□ -0.49
SMKR1-201ENST00000462322 SPINK7P58062 85 aa12.02□□□□□ -0.49
SMKR1-201ENST00000462322 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
SMKR1-201ENST00000462322 MMP24-AS1A0A0U1RRL7 71 aa12□□□□□ -0.49
SMKR1-201ENST00000462322 K7EQZ3 153 aa12□□□□□ -0.49
SMKR1-201ENST00000462322 BPY2O14599 106 aa11.99□□□□□ -0.49
SMKR1-201ENST00000462322 TMEM254Q8TBM7 123 aa11.98□□□□□ -0.49
SMKR1-201ENST00000462322 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
SMKR1-201ENST00000462322 hDV103S1A0JD37 113 aa11.94□□□□□ -0.5
SMKR1-201ENST00000462322 K7EP34 96 aa11.94□□□□□ -0.5
SMKR1-201ENST00000462322 CRCT1Q9UGL9 99 aa11.93□□□□□ -0.5
SMKR1-201ENST00000462322 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
SMKR1-201ENST00000462322 NDUFS5O43920 106 aa11.9□□□□□ -0.5
SMKR1-201ENST00000462322 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
SMKR1-201ENST00000462322 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
SMKR1-201ENST00000462322 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
SMKR1-201ENST00000462322 Q8N9L7 120 aa11.85□□□□□ -0.51
SMKR1-201ENST00000462322 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
SMKR1-201ENST00000462322 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
SMKR1-201ENST00000462322 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
SMKR1-201ENST00000462322 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
SMKR1-201ENST00000462322 MT2AP02795 61 aa11.74□□□□□ -0.53
SMKR1-201ENST00000462322 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 F8W1H4 67 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 Q5W150 140 aa11.72□□□□□ -0.53
SMKR1-201ENST00000462322 IGKV2D-30A0A075B6S6 120 aa11.7□□□□□ -0.54
SMKR1-201ENST00000462322 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
SMKR1-201ENST00000462322 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
SMKR1-201ENST00000462322 MT1FP04733 61 aa11.65□□□□□ -0.54
SMKR1-201ENST00000462322 C7orf65Q6ZTY9 151 aa11.65□□□□□ -0.54
SMKR1-201ENST00000462322 KRTAP10-10P60014 251 aa11.63□□□□□ -0.55
SMKR1-201ENST00000462322 CXCL6P80162 114 aa11.63□□□□□ -0.55
SMKR1-201ENST00000462322 H1FX-AS1Q4G0G2 97 aa11.58□□□□□ -0.56
SMKR1-201ENST00000462322 USH2AO75445 5202 aa11.56□□□□□ -0.56
SMKR1-201ENST00000462322 KRTAP9-3Q9BYQ3 159 aa11.51□□□□□ -0.57
SMKR1-201ENST00000462322 C4orf26Q17RF5 130 aa11.47□□□□□ -0.57
SMKR1-201ENST00000462322 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
SMKR1-201ENST00000462322 SSPOA2VEC9 5147 aa11.43□□□□□ -0.58
SMKR1-201ENST00000462322 LCE2BO14633 110 aa11.43□□□□□ -0.58
SMKR1-201ENST00000462322 ACYP1P07311 99 aa11.41□□□□□ -0.58
SMKR1-201ENST00000462322 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
SMKR1-201ENST00000462322 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
SMKR1-201ENST00000462322 C1orf64Q8NEQ6 169 aa11.28□□□□□ -0.6
SMKR1-201ENST00000462322 KRTAP3-1Q9BYR8 98 aa11.28□□□□□ -0.6
SMKR1-201ENST00000462322 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
SMKR1-201ENST00000462322 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 KRTAP19-1Q8IUB9 90 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 S4R3F8 94 aa11.21□□□□□ -0.61
SMKR1-201ENST00000462322 TRAV22A0A0B4J277 110 aa11.2□□□□□ -0.62
SMKR1-201ENST00000462322 A0A1B0GV90 55 aa11.19□□□□□ -0.62
SMKR1-201ENST00000462322 CYP4F30PQ9H0H9 118 aa11.19□□□□□ -0.62
SMKR1-201ENST00000462322 FCGBPQ9Y6R7 5405 aaPredicted RBP11.15□□□□□ -0.62
SMKR1-201ENST00000462322 LOC101927531A0A1B0GV80 90 aa11.14□□□□□ -0.63
SMKR1-201ENST00000462322 LINC00643Q86TS7 51 aa11.14□□□□□ -0.63
SMKR1-201ENST00000462322 CSAG1Q6PB30 78 aa11.12□□□□□ -0.63
SMKR1-201ENST00000462322 LCA10Q71F78 164 aa11.12□□□□□ -0.63
SMKR1-201ENST00000462322 UQCRQO14949 82 aa11.11□□□□□ -0.63
SMKR1-201ENST00000462322 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.1□□□□□ -0.63
SMKR1-201ENST00000462322 A0A087WVE0 104 aa11.08□□□□□ -0.64
SMKR1-201ENST00000462322 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
SMKR1-201ENST00000462322 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
SMKR1-201ENST00000462322 H0Y9P7 68 aa11.05□□□□□ -0.64
SMKR1-201ENST00000462322 ATOX1O00244 68 aa11.04□□□□□ -0.64
SMKR1-201ENST00000462322 KRTAP19-6Q3LI70 58 aa11.01□□□□□ -0.65
SMKR1-201ENST00000462322 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
SMKR1-201ENST00000462322 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
SMKR1-201ENST00000462322 J3QR89 54 aa10.93□□□□□ -0.66
SMKR1-201ENST00000462322 LINC00208Q96KT6 92 aa10.89□□□□□ -0.67
SMKR1-201ENST00000462322 OCR1Q9BZK8 76 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms