RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
ECHDC1-212ENST00000461239 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 FAM240AA0A1B0GVK7 77 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 H7C2G1 150 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 MOBPQ13875 183 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 ANKRD29Q8N6D5 301 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
ECHDC1-212ENST00000461239 ACYP1P07311 99 aa4.54□□□□□ -1.68
ECHDC1-212ENST00000461239 Q6Q795 121 aa4.54□□□□□ -1.68
ECHDC1-212ENST00000461239 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
ECHDC1-212ENST00000461239 SSBP3-AS1Q7Z2R9 100 aa4.53□□□□□ -1.68
ECHDC1-212ENST00000461239 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
ECHDC1-212ENST00000461239 hADV29S1A0JD25 119 aa4.52□□□□□ -1.69
ECHDC1-212ENST00000461239 C9JAW5 83 aa4.52□□□□□ -1.69
ECHDC1-212ENST00000461239 Q6ZQY7 126 aa4.52□□□□□ -1.69
ECHDC1-212ENST00000461239 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
ECHDC1-212ENST00000461239 LST1O00453 97 aa4.51□□□□□ -1.69
ECHDC1-212ENST00000461239 TRACP01848 142 aa4.51□□□□□ -1.69
ECHDC1-212ENST00000461239 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
ECHDC1-212ENST00000461239 C9orf153Q5TBE3 101 aa4.5□□□□□ -1.69
ECHDC1-212ENST00000461239 SPAG11AQ6PDA7 123 aa4.5□□□□□ -1.69
ECHDC1-212ENST00000461239 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
ECHDC1-212ENST00000461239 LAMTOR3Q9UHA4 124 aa4.5□□□□□ -1.69
ECHDC1-212ENST00000461239 SNCGO76070 127 aa4.49□□□□□ -1.69
ECHDC1-212ENST00000461239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-212ENST00000461239 H0YGX0 51 aa4.48□□□□□ -1.69
ECHDC1-212ENST00000461239 SPINK1P00995 79 aa4.48□□□□□ -1.69
ECHDC1-212ENST00000461239 CLEC2BQ92478 149 aa4.48□□□□□ -1.69
ECHDC1-212ENST00000461239 RPS29P62273 56 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-212ENST00000461239 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
ECHDC1-212ENST00000461239 A0A1B0GX51 115 aa4.46□□□□□ -1.7
ECHDC1-212ENST00000461239 HRCT1Q6UXD1 115 aa4.46□□□□□ -1.7
ECHDC1-212ENST00000461239 A8MU10 97 aa4.45□□□□□ -1.7
ECHDC1-212ENST00000461239 MT-ATP8P03928 68 aa4.45□□□□□ -1.7
ECHDC1-212ENST00000461239 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
ECHDC1-212ENST00000461239 TRBV7-7A0A0K0K1E9 115 aa4.44□□□□□ -1.7
ECHDC1-212ENST00000461239 H3BQ85 93 aa4.44□□□□□ -1.7
ECHDC1-212ENST00000461239 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
ECHDC1-212ENST00000461239 IGFL1Q6UW32 110 aa4.44□□□□□ -1.7
ECHDC1-212ENST00000461239 CD164Q04900 197 aa4.43□□□□□ -1.7
ECHDC1-212ENST00000461239 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
ECHDC1-212ENST00000461239 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
ECHDC1-212ENST00000461239 DNAL4O96015 105 aa4.42□□□□□ -1.7
ECHDC1-212ENST00000461239 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
ECHDC1-212ENST00000461239 MUC2Q02817 5179 aa4.42□□□□□ -1.7
ECHDC1-212ENST00000461239 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
ECHDC1-212ENST00000461239 TPRXLQ17RH7 258 aa4.41□□□□□ -1.7
ECHDC1-212ENST00000461239 Q5XG85 94 aa4.41□□□□□ -1.7
ECHDC1-212ENST00000461239 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-212ENST00000461239 F8WEM9 126 aa4.4□□□□□ -1.71
ECHDC1-212ENST00000461239 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
ECHDC1-212ENST00000461239 Q6JHZ5 121 aa4.4□□□□□ -1.71
ECHDC1-212ENST00000461239 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
ECHDC1-212ENST00000461239 C1orf195Q5TG92 126 aa4.39□□□□□ -1.71
ECHDC1-212ENST00000461239 OBSCN-AS1Q96MR7 158 aa4.39□□□□□ -1.71
ECHDC1-212ENST00000461239 ORMDL1Q9P0S3 153 aa4.39□□□□□ -1.71
ECHDC1-212ENST00000461239 LIMD2Q9BT23 127 aa4.38□□□□□ -1.71
ECHDC1-212ENST00000461239 A0A1W2PNM2 257 aa4.37□□□□□ -1.71
ECHDC1-212ENST00000461239 TMEM256-PLSCR3K7ERE1 68 aa4.37□□□□□ -1.71
ECHDC1-212ENST00000461239 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
ECHDC1-212ENST00000461239 PDE6GP18545 87 aa4.35□□□□□ -1.71
ECHDC1-212ENST00000461239 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
ECHDC1-212ENST00000461239 ATOX1O00244 68 aa4.34□□□□□ -1.71
ECHDC1-212ENST00000461239 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
ECHDC1-212ENST00000461239 UQCRQO14949 82 aa4.33□□□□□ -1.72
ECHDC1-212ENST00000461239 Q96NJ1 140 aa4.33□□□□□ -1.72
ECHDC1-212ENST00000461239 A0A087WSZ3 146 aa4.32□□□□□ -1.72
ECHDC1-212ENST00000461239 CCKP06307 115 aa4.32□□□□□ -1.72
ECHDC1-212ENST00000461239 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
ECHDC1-212ENST00000461239 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-212ENST00000461239 RBM3P98179 157 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-212ENST00000461239 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
ECHDC1-212ENST00000461239 LOC110117498A0A087WWA1 95 aa4.29□□□□□ -1.72
ECHDC1-212ENST00000461239 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
ECHDC1-212ENST00000461239 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
ECHDC1-212ENST00000461239 COX7CP15954 63 aa4.29□□□□□ -1.72
ECHDC1-212ENST00000461239 Q6ZQT0 140 aa4.28□□□□□ -1.72
ECHDC1-212ENST00000461239 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
ECHDC1-212ENST00000461239 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
ECHDC1-212ENST00000461239 A0A1B0GW54 56 aa4.27□□□□□ -1.73
ECHDC1-212ENST00000461239 CCDC179H3BU77 68 aa4.27□□□□□ -1.73
ECHDC1-212ENST00000461239 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
ECHDC1-212ENST00000461239 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
ECHDC1-212ENST00000461239 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
ECHDC1-212ENST00000461239 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-212ENST00000461239 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
ECHDC1-212ENST00000461239 DSCR8Q96T75 97 aa4.26□□□□□ -1.73
ECHDC1-212ENST00000461239 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
ECHDC1-212ENST00000461239 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
ECHDC1-212ENST00000461239 DEFB116Q30KQ4 102 aa4.25□□□□□ -1.73
ECHDC1-212ENST00000461239 A0A1B0GVX0 72 aa4.24□□□□□ -1.73
ECHDC1-212ENST00000461239 TMEM258P61165 79 aa4.23□□□□□ -1.73
ECHDC1-212ENST00000461239 PCOTHQ58A44 107 aa4.23□□□□□ -1.73
ECHDC1-212ENST00000461239 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
ECHDC1-212ENST00000461239 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-212ENST00000461239 IGKV3D-7A0A0C4DH55 119 aa4.2□□□□□ -1.74
ECHDC1-212ENST00000461239 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
ECHDC1-212ENST00000461239 J3KT08 172 aa4.19□□□□□ -1.74
ECHDC1-212ENST00000461239 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
ECHDC1-212ENST00000461239 C20orf166-AS1Q96NR2 134 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms