RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 H0YAA0 97 aa4.75□□□□□ -1.65
BRCA1-205ENST00000461221 CENPEQ02224 2701 aa4.75□□□□□ -1.65
BRCA1-205ENST00000461221 A0A1B0GVY2 172 aa4.75□□□□□ -1.65
BRCA1-205ENST00000461221 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
BRCA1-205ENST00000461221 TPRXLQ17RH7 258 aa4.7□□□□□ -1.66
BRCA1-205ENST00000461221 KRTAP21-3Q3LHN1 58 aa4.7□□□□□ -1.66
BRCA1-205ENST00000461221 LAMA5O15230 3695 aa4.7□□□□□ -1.66
BRCA1-205ENST00000461221 BOD1L1Q8NFC6 3051 aa4.69□□□□□ -1.66
BRCA1-205ENST00000461221 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
BRCA1-205ENST00000461221 VPS13CQ709C8 3753 aa4.68□□□□□ -1.66
BRCA1-205ENST00000461221 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
BRCA1-205ENST00000461221 CHD6Q8TD26 2715 aa4.65□□□□□ -1.66
BRCA1-205ENST00000461221 UNC79Q9P2D8 2635 aa4.65□□□□□ -1.66
BRCA1-205ENST00000461221 NBPF19A0A087WUL8 3843 aa4.65□□□□□ -1.67
BRCA1-205ENST00000461221 PRRC2CQ9Y520 2896 aaKnown RBP4.64□□□□□ -1.67
BRCA1-205ENST00000461221 DCHS1Q96JQ0 3298 aa4.63□□□□□ -1.67
BRCA1-205ENST00000461221 TEX15Q9BXT5 2789 aa4.63□□□□□ -1.67
BRCA1-205ENST00000461221 TNRC18O15417 2968 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-205ENST00000461221 FRYQ5TBA9 3013 aa4.62□□□□□ -1.67
BRCA1-205ENST00000461221 TEP1Q99973 2627 aaKnown RBP4.62□□□□□ -1.67
BRCA1-205ENST00000461221 NOTCH1P46531 2555 aa4.6□□□□□ -1.67
BRCA1-205ENST00000461221 GCN1Q92616 2671 aaKnown RBP4.6□□□□□ -1.67
BRCA1-205ENST00000461221 AKAP9Q99996 3911 aa4.6□□□□□ -1.67
BRCA1-205ENST00000461221 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
BRCA1-205ENST00000461221 CSMD1Q96PZ7 3565 aa4.56□□□□□ -1.68
BRCA1-205ENST00000461221 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
BRCA1-205ENST00000461221 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
BRCA1-205ENST00000461221 DMXL1Q9Y485 3027 aa4.5□□□□□ -1.69
BRCA1-205ENST00000461221 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
BRCA1-205ENST00000461221 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-205ENST00000461221 SETXQ7Z333 2677 aaKnown RBP4.48□□□□□ -1.69
BRCA1-205ENST00000461221 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
BRCA1-205ENST00000461221 KMT2BQ9UMN6 2715 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-205ENST00000461221 KALRNO60229 2985 aa4.47□□□□□ -1.69
BRCA1-205ENST00000461221 CSMD2Q7Z408 3487 aa4.47□□□□□ -1.69
BRCA1-205ENST00000461221 NBEAL2Q6ZNJ1 2754 aa4.44□□□□□ -1.7
BRCA1-205ENST00000461221 MAP1AP78559 2803 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-205ENST00000461221 DMXL2Q8TDJ6 3036 aa4.43□□□□□ -1.7
BRCA1-205ENST00000461221 IGSF10Q6WRI0 2623 aa4.43□□□□□ -1.7
BRCA1-205ENST00000461221 CUBNO60494 3623 aa4.4□□□□□ -1.71
BRCA1-205ENST00000461221 ZNF292O60281 2723 aa4.39□□□□□ -1.71
BRCA1-205ENST00000461221 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
BRCA1-205ENST00000461221 ITPR2Q14571 2701 aa4.39□□□□□ -1.71
BRCA1-205ENST00000461221 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
BRCA1-205ENST00000461221 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
BRCA1-205ENST00000461221 ATMQ13315 3056 aa4.36□□□□□ -1.71
BRCA1-205ENST00000461221 BAHCC1Q9P281 2608 aa4.36□□□□□ -1.71
BRCA1-205ENST00000461221 NBEAQ8NFP9 2946 aa4.33□□□□□ -1.72
BRCA1-205ENST00000461221 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-205ENST00000461221 INE1O15225 51 aa4.31□□□□□ -1.72
BRCA1-205ENST00000461221 APCP25054 2843 aa4.29□□□□□ -1.72
BRCA1-205ENST00000461221 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
BRCA1-205ENST00000461221 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
BRCA1-205ENST00000461221 ADGRG4Q8IZF6 3080 aa4.23□□□□□ -1.73
BRCA1-205ENST00000461221 DSPP15924 2871 aaKnown RBP4.22□□□□□ -1.73
BRCA1-205ENST00000461221 ZZEF1O43149 2961 aa4.22□□□□□ -1.73
BRCA1-205ENST00000461221 ZNF469Q96JG9 3925 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-205ENST00000461221 ASH1LQ9NR48 2969 aaKnown RBP4.2□□□□□ -1.74
BRCA1-205ENST00000461221 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
BRCA1-205ENST00000461221 CSMD3Q7Z407 3707 aa4.18□□□□□ -1.74
BRCA1-205ENST00000461221 ITPR1Q14643 2758 aa4.17□□□□□ -1.74
BRCA1-205ENST00000461221 ANK3Q12955 4377 aaKnown RBP4.16□□□□□ -1.74
BRCA1-205ENST00000461221 UTP20O75691 2785 aaKnown RBP4.15□□□□□ -1.75
BRCA1-205ENST00000461221 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-205ENST00000461221 CRYBG3Q68DQ2 2970 aa4.13□□□□□ -1.75
BRCA1-205ENST00000461221 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
BRCA1-205ENST00000461221 TENM4Q6N022 2769 aa4.11□□□□□ -1.75
BRCA1-205ENST00000461221 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
BRCA1-205ENST00000461221 TACC2O95359 2948 aa4.1□□□□□ -1.75
BRCA1-205ENST00000461221 TGP01266 2768 aa4.09□□□□□ -1.75
BRCA1-205ENST00000461221 COL12A1Q99715 3063 aa4.09□□□□□ -1.75
BRCA1-205ENST00000461221 CELSR2Q9HCU4 2923 aa4.08□□□□□ -1.76
BRCA1-205ENST00000461221 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
BRCA1-205ENST00000461221 NIPBLQ6KC79 2804 aaeCLIP4.07□□□□□ -1.76
BRCA1-205ENST00000461221 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
BRCA1-205ENST00000461221 ANK2Q01484 3957 aa4.05□□□□□ -1.76
BRCA1-205ENST00000461221 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
BRCA1-205ENST00000461221 LYSTQ99698 3801 aa4.03□□□□□ -1.76
BRCA1-205ENST00000461221 LRBAP50851 2863 aa4□□□□□ -1.77
BRCA1-205ENST00000461221 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
BRCA1-205ENST00000461221 TENM1Q9UKZ4 2725 aa3.98□□□□□ -1.77
BRCA1-205ENST00000461221 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
BRCA1-205ENST00000461221 HRNRQ86YZ3 2850 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-205ENST00000461221 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
BRCA1-205ENST00000461221 TENM2Q9NT68 2774 aa3.95□□□□□ -1.78
BRCA1-205ENST00000461221 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
BRCA1-205ENST00000461221 KRTAP3-3Q9BYR6 98 aa3.9□□□□□ -1.78
BRCA1-205ENST00000461221 DNAH1Q9P2D7 4330 aa3.9□□□□□ -1.79
BRCA1-205ENST00000461221 FLNCQ14315 2725 aa3.89□□□□□ -1.79
BRCA1-205ENST00000461221 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
BRCA1-205ENST00000461221 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
BRCA1-205ENST00000461221 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
BRCA1-205ENST00000461221 PDZD2O15018 2839 aa3.83□□□□□ -1.8
BRCA1-205ENST00000461221 NF1P21359 2839 aa3.82□□□□□ -1.8
BRCA1-205ENST00000461221 DNAH3Q8TD57 4116 aa3.79□□□□□ -1.8
BRCA1-205ENST00000461221 DNAH7Q8WXX0 4024 aa3.77□□□□□ -1.81
BRCA1-205ENST00000461221 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
BRCA1-205ENST00000461221 FBN2P35556 2912 aa3.71□□□□□ -1.82
BRCA1-205ENST00000461221 COL7A1Q02388 2944 aa3.69□□□□□ -1.82
BRCA1-205ENST00000461221 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms