RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
SMPD4-216ENST00000461187 K7ERJ3 54 aa7.19□□□□□ -1.26
SMPD4-216ENST00000461187 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
SMPD4-216ENST00000461187 COX6CP09669 75 aa7.17□□□□□ -1.26
SMPD4-216ENST00000461187 HSD52Q0P140 79 aa7.17□□□□□ -1.26
SMPD4-216ENST00000461187 MTURNQ8N3F0 131 aa7.16□□□□□ -1.26
SMPD4-216ENST00000461187 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
SMPD4-216ENST00000461187 VPS25Q9BRG1 176 aa7.15□□□□□ -1.26
SMPD4-216ENST00000461187 SPINK7P58062 85 aa7.14□□□□□ -1.27
SMPD4-216ENST00000461187 RBM3P98179 157 aaKnown RBP7.13□□□□□ -1.27
SMPD4-216ENST00000461187 DSCR8Q96T75 97 aa7.11□□□□□ -1.27
SMPD4-216ENST00000461187 J3KT08 172 aa7.1□□□□□ -1.27
SMPD4-216ENST00000461187 PYY3Q5JQD4 70 aa7.09□□□□□ -1.27
SMPD4-216ENST00000461187 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
SMPD4-216ENST00000461187 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
SMPD4-216ENST00000461187 Q6ZQT0 140 aa7.07□□□□□ -1.28
SMPD4-216ENST00000461187 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
SMPD4-216ENST00000461187 C9JAW5 83 aa7.06□□□□□ -1.28
SMPD4-216ENST00000461187 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
SMPD4-216ENST00000461187 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
SMPD4-216ENST00000461187 A8MWP4 228 aa7.05□□□□□ -1.28
SMPD4-216ENST00000461187 BAALC-AS2P0C853 105 aa7.05□□□□□ -1.28
SMPD4-216ENST00000461187 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
SMPD4-216ENST00000461187 NDUFB1O75438 58 aa7.04□□□□□ -1.28
SMPD4-216ENST00000461187 WFDC13Q8IUB5 93 aa7.04□□□□□ -1.28
SMPD4-216ENST00000461187 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
SMPD4-216ENST00000461187 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
SMPD4-216ENST00000461187 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.29
SMPD4-216ENST00000461187 LYRM7Q5U5X0 104 aa7□□□□□ -1.29
SMPD4-216ENST00000461187 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
SMPD4-216ENST00000461187 Q6ZVQ6 151 aa6.97□□□□□ -1.29
SMPD4-216ENST00000461187 A0A1B0GW54 56 aa6.96□□□□□ -1.3
SMPD4-216ENST00000461187 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
SMPD4-216ENST00000461187 JMJD7-PLA2G4BH0Y9G9 81 aa6.95□□□□□ -1.3
SMPD4-216ENST00000461187 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
SMPD4-216ENST00000461187 ATXN8Q156A1 80 aa6.92□□□□□ -1.3
SMPD4-216ENST00000461187 PDE6GP18545 87 aa6.91□□□□□ -1.3
SMPD4-216ENST00000461187 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
SMPD4-216ENST00000461187 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.3
SMPD4-216ENST00000461187 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
SMPD4-216ENST00000461187 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.3
SMPD4-216ENST00000461187 NAA38Q9BRA0 125 aaKnown RBP6.9□□□□□ -1.3
SMPD4-216ENST00000461187 C14orf132Q9NPU4 83 aa6.9□□□□□ -1.3
SMPD4-216ENST00000461187 NREPQ16612 68 aa6.87□□□□□ -1.31
SMPD4-216ENST00000461187 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
SMPD4-216ENST00000461187 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
SMPD4-216ENST00000461187 K7EQZ3 153 aa6.82□□□□□ -1.32
SMPD4-216ENST00000461187 M0R143 59 aa6.82□□□□□ -1.32
SMPD4-216ENST00000461187 NDUFS5O43920 106 aa6.82□□□□□ -1.32
SMPD4-216ENST00000461187 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
SMPD4-216ENST00000461187 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
SMPD4-216ENST00000461187 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
SMPD4-216ENST00000461187 Q5W150 140 aa6.8□□□□□ -1.32
SMPD4-216ENST00000461187 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
SMPD4-216ENST00000461187 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
SMPD4-216ENST00000461187 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
SMPD4-216ENST00000461187 BPY2O14599 106 aa6.73□□□□□ -1.33
SMPD4-216ENST00000461187 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
SMPD4-216ENST00000461187 HCG22E2RYF7 251 aa6.69□□□□□ -1.34
SMPD4-216ENST00000461187 H3BT86 120 aa6.69□□□□□ -1.34
SMPD4-216ENST00000461187 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
SMPD4-216ENST00000461187 Q8N9L7 120 aa6.68□□□□□ -1.34
SMPD4-216ENST00000461187 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
SMPD4-216ENST00000461187 MT1BP07438 61 aa6.66□□□□□ -1.34
SMPD4-216ENST00000461187 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.34
SMPD4-216ENST00000461187 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.34
SMPD4-216ENST00000461187 A6NN06 94 aa6.65□□□□□ -1.34
SMPD4-216ENST00000461187 CXCL6P80162 114 aa6.64□□□□□ -1.35
SMPD4-216ENST00000461187 BATFQ16520 125 aa6.64□□□□□ -1.35
SMPD4-216ENST00000461187 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
SMPD4-216ENST00000461187 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
SMPD4-216ENST00000461187 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
SMPD4-216ENST00000461187 NEBP20929 6669 aa6.62□□□□□ -1.35
SMPD4-216ENST00000461187 TSTD3H0UI37 97 aa6.61□□□□□ -1.35
SMPD4-216ENST00000461187 Q5VV11 94 aa6.61□□□□□ -1.35
SMPD4-216ENST00000461187 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
SMPD4-216ENST00000461187 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
SMPD4-216ENST00000461187 SMIM6P0DI80 62 aa6.6□□□□□ -1.35
SMPD4-216ENST00000461187 S4R3F8 94 aa6.6□□□□□ -1.35
SMPD4-216ENST00000461187 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
SMPD4-216ENST00000461187 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
SMPD4-216ENST00000461187 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
SMPD4-216ENST00000461187 LCA10Q71F78 164 aa6.57□□□□□ -1.36
SMPD4-216ENST00000461187 C1orf64Q8NEQ6 169 aa6.56□□□□□ -1.36
SMPD4-216ENST00000461187 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
SMPD4-216ENST00000461187 SMCPP49901 116 aaPredicted RBP6.52□□□□□ -1.37
SMPD4-216ENST00000461187 KLKP1Q107X0 134 aa6.51□□□□□ -1.37
SMPD4-216ENST00000461187 UBL5Q9BZL1 73 aa6.49□□□□□ -1.37
SMPD4-216ENST00000461187 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
SMPD4-216ENST00000461187 SPCS1Q9Y6A9 102 aa6.47□□□□□ -1.37
SMPD4-216ENST00000461187 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
SMPD4-216ENST00000461187 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
SMPD4-216ENST00000461187 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
SMPD4-216ENST00000461187 KMT2DO14686 5537 aa6.39□□□□□ -1.39
SMPD4-216ENST00000461187 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
SMPD4-216ENST00000461187 A0A087WVE0 104 aa6.38□□□□□ -1.39
SMPD4-216ENST00000461187 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
SMPD4-216ENST00000461187 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
SMPD4-216ENST00000461187 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
SMPD4-216ENST00000461187 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms