RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	IGKV2-29	A2NJV5	120 aa	Predicted RBP	1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	TMEM262	E9PQX1	116 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044		M0R135	149 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044		M0R2T5	61 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	IGHV3-30	P01768	117 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	SPINK8	P0C7L1	97 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	ARL14EPL	P0DKL9	152 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	IGHV3-30-5	P0DP03	117 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	HTN3	P15516	51 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	C9orf116	Q5BN46	136 aa	Predicted RBP	1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	C10orf128	Q5T292	105 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	SPTSSB	Q8NFR3	76 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC00526	Q96FQ7	95 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC01600	Q96MT4	127 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	SPANXD	Q9BXN6	97 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC00846	Q9NV44	126 aa		1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	AHNAK	Q09666	5890 aa	Known RBP	1.27	□□□□□ -2.21
FXR1-204	ENST00000461044	TRBV10-3	A0A0K0K1G6	114 aa		1.26	□□□□□ -2.21
FXR1-204	ENST00000461044	CCK	P06307	115 aa		1.26	□□□□□ -2.21
FXR1-204	ENST00000461044	EDDM3B	P56851	147 aa		1.26	□□□□□ -2.21
FXR1-204	ENST00000461044	PIGY	Q3MUY2	71 aa		1.26	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC00312	Q9Y6C7	94 aa		1.26	□□□□□ -2.21
FXR1-204	ENST00000461044	TRBV6-1	A0A0K0K1D8	114 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	HIGD1C	A8MV81	97 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	SPINK4	O60575	86 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	KRTAP12-3	P60328	96 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	WFDC2	Q14508	124 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	FXYD3	Q14802	87 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	ETDB	Q3ZM63	59 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044		Q6ZSA8	131 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	C5orf56	Q8N8D9	126 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	MYOZ3	Q8TDC0	251 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	MGST2	Q99735	147 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	CYSTM1	Q9H1C7	97 aa		1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	FLG	P20930	4061 aa	Predicted RBP	1.25	□□□□□ -2.21
FXR1-204	ENST00000461044	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	1.24	□□□□□ -2.21
FXR1-204	ENST00000461044		A0A1B0GUT8	65 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	IGKV2D-40	P01614	121 aa	Predicted RBP	1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	MT-ATP8	P03928	68 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	IFITM1	P13164	125 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	CCL3L1	P16619	93 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	UBE2L3	P68036	154 aa	Known RBP	1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	KRTAP21-2	Q3LI59	83 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	CFAP126	Q5VTH2	177 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	KRTAP5-10	Q6L8G5	202 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	C20orf78	Q9BR46	151 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	KRTAP4-1	Q9BYQ7	146 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	HMCN1	Q96RW7	5635 aa		1.24	□□□□□ -2.21
FXR1-204	ENST00000461044	TRBV25-1	A0A075B6N4	114 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	MYMX	A0A1B0GTQ4	84 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC01546	A6NGU7	62 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044		G3V318	75 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	PLN	P26678	52 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	FCER1G	P30273	86 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	UBE2D1	P51668	147 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	C10orf113	Q5VZT2	155 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	FAM167A-AS1	Q96KT0	104 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	NXT2	Q9NPJ8	142 aa	Known RBP	1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	TMEM14B	Q9NUH8	114 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	KAAG1	Q9UBP8	84 aa		1.23	□□□□□ -2.21
FXR1-204	ENST00000461044	TRBV7-3	A0A075B6L6	115 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	TRAV13-2	A0A0B4J235	113 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	TRBV7-7	A0A0K0K1E9	115 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	RBAKDN	A6NC62	111 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	LINC01549	A6NIU2	74 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044		D6R8Y8	96 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	IFI27	P40305	119 aa	Predicted RBP	1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	ZNF137P	P52743	207 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	CCL18	P55774	89 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	UBE2D3	P61077	147 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	UBE2D2	P62837	147 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	PRCD	Q00LT1	54 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	PLGLA	Q15195	96 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	KRTAP19-6	Q3LI70	58 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	SPINK9	Q5DT21	86 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	C5orf38	Q86SI9	138 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044		Q86TA4	180 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	TRGV9	Q99603	122 aa		1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	1.22	□□□□□ -2.21
FXR1-204	ENST00000461044	IQCF6	A8MYZ5	107 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	HCG22	E2RYF7	251 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044		K7EMI3	77 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	ACYP1	P07311	99 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	ARMS2	P0C7Q2	107 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	SPRR2E	P22531	72 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	SPRR2B	P35325	72 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	SPRR2A	P35326	72 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	ATXN8	Q156A1	80 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	DEFB114	Q30KQ6	69 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	TMEM170B	Q5T4T1	132 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	MINOS1	Q5TGZ0	78 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	LINC00208	Q96KT6	92 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	GAFA1	Q96PS6	74 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	NDUFA4L2	Q9NRX3	87 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	LINC00474	Q9P2X8	69 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	PRO1854	Q9UHT4	67 aa		1.21	□□□□□ -2.22
FXR1-204	ENST00000461044	TRBV30	A0A0K0K1B3	111 aa		1.2	□□□□□ -2.22
FXR1-204	ENST00000461044	TEX49	A0A1B0GTD5	131 aa		1.2	□□□□□ -2.22
FXR1-204	ENST00000461044	ZNF815P	A8K554	130 aa		1.2	□□□□□ -2.22
FXR1-204	ENST00000461044		F8VRH5	84 aa		1.2	□□□□□ -2.22

Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms