RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
CPNE6-202ENST00000460657 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
CPNE6-202ENST00000460657 Q8N1X5 172 aa7.12□□□□□ -1.27
CPNE6-202ENST00000460657 TENM4Q6N022 2769 aa7.11□□□□□ -1.27
CPNE6-202ENST00000460657 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
CPNE6-202ENST00000460657 A0A087X002 238 aa7.09□□□□□ -1.27
CPNE6-202ENST00000460657 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
CPNE6-202ENST00000460657 KRTAP10-2P60368 255 aa7.09□□□□□ -1.27
CPNE6-202ENST00000460657 VWFP04275 2813 aa7.07□□□□□ -1.28
CPNE6-202ENST00000460657 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
CPNE6-202ENST00000460657 SPINK7P58062 85 aa7.07□□□□□ -1.28
CPNE6-202ENST00000460657 LCA10Q71F78 164 aa7.06□□□□□ -1.28
CPNE6-202ENST00000460657 KRTAP10-1P60331 282 aa7.06□□□□□ -1.28
CPNE6-202ENST00000460657 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
CPNE6-202ENST00000460657 ASB16-AS1Q495Z4 193 aa7.03□□□□□ -1.28
CPNE6-202ENST00000460657 CSMD2Q7Z408 3487 aa6.98□□□□□ -1.29
CPNE6-202ENST00000460657 RBM12B-AS1Q9P1G2 102 aa6.97□□□□□ -1.29
CPNE6-202ENST00000460657 OTOGQ6ZRI0 2925 aa6.95□□□□□ -1.3
CPNE6-202ENST00000460657 CUBNO60494 3623 aa6.94□□□□□ -1.3
CPNE6-202ENST00000460657 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
CPNE6-202ENST00000460657 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
CPNE6-202ENST00000460657 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
CPNE6-202ENST00000460657 A0A1B0GU33 70 aa6.91□□□□□ -1.3
CPNE6-202ENST00000460657 J3QL48 77 aa6.88□□□□□ -1.31
CPNE6-202ENST00000460657 A8MU10 97 aa6.87□□□□□ -1.31
CPNE6-202ENST00000460657 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
CPNE6-202ENST00000460657 A6NN06 94 aa6.83□□□□□ -1.32
CPNE6-202ENST00000460657 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
CPNE6-202ENST00000460657 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
CPNE6-202ENST00000460657 FBN1P35555 2871 aaKnown RBP6.82□□□□□ -1.32
CPNE6-202ENST00000460657 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
CPNE6-202ENST00000460657 PKD1L1Q8TDX9 2849 aa6.81□□□□□ -1.32
CPNE6-202ENST00000460657 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
CPNE6-202ENST00000460657 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
CPNE6-202ENST00000460657 A0A0D9SG42 100 aa6.78□□□□□ -1.32
CPNE6-202ENST00000460657 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
CPNE6-202ENST00000460657 Q6ZSA8 131 aa6.77□□□□□ -1.33
CPNE6-202ENST00000460657 H3BS24 57 aa6.76□□□□□ -1.33
CPNE6-202ENST00000460657 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
CPNE6-202ENST00000460657 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
CPNE6-202ENST00000460657 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
CPNE6-202ENST00000460657 TRRAPQ9Y4A5 3859 aa6.72□□□□□ -1.33
CPNE6-202ENST00000460657 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.33
CPNE6-202ENST00000460657 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
CPNE6-202ENST00000460657 ZFHX3Q15911 3703 aa6.71□□□□□ -1.34
CPNE6-202ENST00000460657 S4R3F8 94 aa6.69□□□□□ -1.34
CPNE6-202ENST00000460657 Q5VSD8 79 aa6.66□□□□□ -1.34
CPNE6-202ENST00000460657 TGP01266 2768 aa6.64□□□□□ -1.35
CPNE6-202ENST00000460657 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
CPNE6-202ENST00000460657 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
CPNE6-202ENST00000460657 ZNF469Q96JG9 3925 aaPredicted RBP6.62□□□□□ -1.35
CPNE6-202ENST00000460657 A8MUU9 505 aa6.62□□□□□ -1.35
CPNE6-202ENST00000460657 TENM2Q9NT68 2774 aa6.61□□□□□ -1.35
CPNE6-202ENST00000460657 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
CPNE6-202ENST00000460657 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
CPNE6-202ENST00000460657 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
CPNE6-202ENST00000460657 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
CPNE6-202ENST00000460657 AKAP9Q99996 3911 aa6.56□□□□□ -1.36
CPNE6-202ENST00000460657 ROMO1P60602 79 aa6.55□□□□□ -1.36
CPNE6-202ENST00000460657 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
CPNE6-202ENST00000460657 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
CPNE6-202ENST00000460657 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
CPNE6-202ENST00000460657 R4GN34 69 aa6.42□□□□□ -1.38
CPNE6-202ENST00000460657 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
CPNE6-202ENST00000460657 HUWE1Q7Z6Z7 4374 aaKnown RBP6.4□□□□□ -1.38
CPNE6-202ENST00000460657 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.39
CPNE6-202ENST00000460657 H0YAA0 97 aa6.39□□□□□ -1.39
CPNE6-202ENST00000460657 M0R2T5 61 aa6.39□□□□□ -1.39
CPNE6-202ENST00000460657 MEGF8Q7Z7M0 2845 aa6.38□□□□□ -1.39
CPNE6-202ENST00000460657 M0QZ58 72 aa6.37□□□□□ -1.39
CPNE6-202ENST00000460657 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
CPNE6-202ENST00000460657 XP32Q5T750 250 aa6.33□□□□□ -1.4
CPNE6-202ENST00000460657 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
CPNE6-202ENST00000460657 KRTAP10-8P60410 259 aa6.21□□□□□ -1.41
CPNE6-202ENST00000460657 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
CPNE6-202ENST00000460657 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
CPNE6-202ENST00000460657 COL7A1Q02388 2944 aa6.15□□□□□ -1.42
CPNE6-202ENST00000460657 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
CPNE6-202ENST00000460657 P0C880 135 aa6.13□□□□□ -1.43
CPNE6-202ENST00000460657 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
CPNE6-202ENST00000460657 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
CPNE6-202ENST00000460657 PLECQ15149 4684 aaKnown RBP6.06□□□□□ -1.44
CPNE6-202ENST00000460657 DNAH10Q8IVF4 4471 aa6.06□□□□□ -1.44
CPNE6-202ENST00000460657 DNAH1Q9P2D7 4330 aa6.03□□□□□ -1.44
CPNE6-202ENST00000460657 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
CPNE6-202ENST00000460657 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
CPNE6-202ENST00000460657 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
CPNE6-202ENST00000460657 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
CPNE6-202ENST00000460657 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
CPNE6-202ENST00000460657 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
CPNE6-202ENST00000460657 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
CPNE6-202ENST00000460657 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
CPNE6-202ENST00000460657 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
CPNE6-202ENST00000460657 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
CPNE6-202ENST00000460657 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
CPNE6-202ENST00000460657 DNAH3Q8TD57 4116 aa5.88□□□□□ -1.47
CPNE6-202ENST00000460657 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
CPNE6-202ENST00000460657 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
CPNE6-202ENST00000460657 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
CPNE6-202ENST00000460657 TNP1P09430 55 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms