RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DNAH2Q9P225 4427 aa11.64□□□□□ -0.55
CNEP1R1-203ENST00000458059 DNAH17Q9UFH2 4485 aa11.63□□□□□ -0.55
CNEP1R1-203ENST00000458059 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
CNEP1R1-203ENST00000458059 MRPL34Q9BQ48 92 aaKnown RBP11.63□□□□□ -0.55
CNEP1R1-203ENST00000458059 A6NED7 52 aa11.62□□□□□ -0.55
CNEP1R1-203ENST00000458059 LINC00483Q53H64 154 aa11.62□□□□□ -0.55
CNEP1R1-203ENST00000458059 ZNF861PO60384 105 aa11.61□□□□□ -0.55
CNEP1R1-203ENST00000458059 LIMD2Q9BT23 127 aa11.61□□□□□ -0.55
CNEP1R1-203ENST00000458059 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
CNEP1R1-203ENST00000458059 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
CNEP1R1-203ENST00000458059 PMAIP1Q13794 54 aa11.6□□□□□ -0.55
CNEP1R1-203ENST00000458059 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
CNEP1R1-203ENST00000458059 ASB16-AS1Q495Z4 193 aa11.58□□□□□ -0.55
CNEP1R1-203ENST00000458059 Q5W150 140 aa11.58□□□□□ -0.56
CNEP1R1-203ENST00000458059 Q6ZR54 194 aa11.55□□□□□ -0.56
CNEP1R1-203ENST00000458059 HRES1P13985 223 aa11.55□□□□□ -0.56
CNEP1R1-203ENST00000458059 LCA10Q71F78 164 aa11.54□□□□□ -0.56
CNEP1R1-203ENST00000458059 DNAH6Q9C0G6 4158 aa11.53□□□□□ -0.56
CNEP1R1-203ENST00000458059 DNHD1Q96M86 4753 aa11.52□□□□□ -0.56
CNEP1R1-203ENST00000458059 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
CNEP1R1-203ENST00000458059 PLAC8Q9NZF1 115 aa11.51□□□□□ -0.57
CNEP1R1-203ENST00000458059 LY6G6CO95867 125 aa11.49□□□□□ -0.57
CNEP1R1-203ENST00000458059 IGLV7-43P04211 117 aa11.47□□□□□ -0.57
CNEP1R1-203ENST00000458059 Q75L30 129 aa11.45□□□□□ -0.58
CNEP1R1-203ENST00000458059 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
CNEP1R1-203ENST00000458059 LOC101927531A0A1B0GV80 90 aa11.44□□□□□ -0.58
CNEP1R1-203ENST00000458059 C1orf134Q5TEV5 83 aa11.44□□□□□ -0.58
CNEP1R1-203ENST00000458059 SPINK7P58062 85 aa11.43□□□□□ -0.58
CNEP1R1-203ENST00000458059 SEC61GP60059 68 aa11.42□□□□□ -0.58
CNEP1R1-203ENST00000458059 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
CNEP1R1-203ENST00000458059 ALMS1Q8TCU4 4167 aa11.38□□□□□ -0.59
CNEP1R1-203ENST00000458059 LINC01558Q9Y6Z2 57 aa11.37□□□□□ -0.59
CNEP1R1-203ENST00000458059 LINC00313P59037 77 aa11.31□□□□□ -0.6
CNEP1R1-203ENST00000458059 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
CNEP1R1-203ENST00000458059 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
CNEP1R1-203ENST00000458059 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
CNEP1R1-203ENST00000458059 CDC42SE1Q9NRR8 79 aa11.3□□□□□ -0.6
CNEP1R1-203ENST00000458059 ATP11AUNQ6ZP68 121 aa11.28□□□□□ -0.6
CNEP1R1-203ENST00000458059 KRTAP13-2Q52LG2 175 aa11.27□□□□□ -0.61
CNEP1R1-203ENST00000458059 IGKV2D-30A0A075B6S6 120 aa11.24□□□□□ -0.61
CNEP1R1-203ENST00000458059 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
CNEP1R1-203ENST00000458059 ACYP2P14621 99 aa11.24□□□□□ -0.61
CNEP1R1-203ENST00000458059 SSBP3-AS1Q7Z2R9 100 aa11.24□□□□□ -0.61
CNEP1R1-203ENST00000458059 KTN1-AS1Q86SY8 53 aa11.2□□□□□ -0.62
CNEP1R1-203ENST00000458059 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
CNEP1R1-203ENST00000458059 A6NN06 94 aa11.19□□□□□ -0.62
CNEP1R1-203ENST00000458059 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
CNEP1R1-203ENST00000458059 HYDINQ4G0P3 5121 aa11.17□□□□□ -0.62
CNEP1R1-203ENST00000458059 FAM229AH3BQW9 127 aa11.16□□□□□ -0.62
CNEP1R1-203ENST00000458059 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
CNEP1R1-203ENST00000458059 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
CNEP1R1-203ENST00000458059 A0A1B0GU69 56 aa11.1□□□□□ -0.63
CNEP1R1-203ENST00000458059 SPINK1P00995 79 aa11.09□□□□□ -0.63
CNEP1R1-203ENST00000458059 RBM12B-AS1Q9P1G2 102 aa11.09□□□□□ -0.63
CNEP1R1-203ENST00000458059 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
CNEP1R1-203ENST00000458059 FAT2Q9NYQ8 4349 aa11.06□□□□□ -0.64
CNEP1R1-203ENST00000458059 KRTAP16-1A8MUX0 517 aa11.06□□□□□ -0.64
CNEP1R1-203ENST00000458059 C7orf65Q6ZTY9 151 aa11.05□□□□□ -0.64
CNEP1R1-203ENST00000458059 KRTAP1-4P0C5Y4 121 aa11.04□□□□□ -0.64
CNEP1R1-203ENST00000458059 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
CNEP1R1-203ENST00000458059 PKD1P98161 4303 aa11.03□□□□□ -0.64
CNEP1R1-203ENST00000458059 Q8N1X5 172 aa11.02□□□□□ -0.65
CNEP1R1-203ENST00000458059 PRAC1Q96KF2 57 aa11.02□□□□□ -0.65
CNEP1R1-203ENST00000458059 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
CNEP1R1-203ENST00000458059 ADM2Q7Z4H4 148 aa10.99□□□□□ -0.65
CNEP1R1-203ENST00000458059 PKHD1P08F94 4074 aa10.97□□□□□ -0.65
CNEP1R1-203ENST00000458059 Q6ZSA8 131 aa10.95□□□□□ -0.66
CNEP1R1-203ENST00000458059 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
CNEP1R1-203ENST00000458059 C9orf92A6NGG3 77 aa10.89□□□□□ -0.67
CNEP1R1-203ENST00000458059 MIR22HGQ0VDD5 57 aa10.88□□□□□ -0.67
CNEP1R1-203ENST00000458059 UQCR11O14957 56 aa10.84□□□□□ -0.67
CNEP1R1-203ENST00000458059 FAT1Q14517 4588 aa10.82□□□□□ -0.68
CNEP1R1-203ENST00000458059 LINC00304Q8N9R0 145 aa10.8□□□□□ -0.68
CNEP1R1-203ENST00000458059 SPATA8Q6RVD6 105 aa10.8□□□□□ -0.68
CNEP1R1-203ENST00000458059 DYNC1H1Q14204 4646 aaKnown RBP10.66□□□□□ -0.7
CNEP1R1-203ENST00000458059 FLG2Q5D862 2391 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-203ENST00000458059 SACSQ9NZJ4 4579 aa10.61□□□□□ -0.71
CNEP1R1-203ENST00000458059 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-203ENST00000458059 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
CNEP1R1-203ENST00000458059 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
CNEP1R1-203ENST00000458059 H0YAA0 97 aa10.53□□□□□ -0.72
CNEP1R1-203ENST00000458059 A8MUU9 505 aa10.47□□□□□ -0.73
CNEP1R1-203ENST00000458059 LINC01554Q52M75 96 aa10.46□□□□□ -0.74
CNEP1R1-203ENST00000458059 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
CNEP1R1-203ENST00000458059 APOBP04114 4563 aaKnown RBP10.44□□□□□ -0.74
CNEP1R1-203ENST00000458059 KRTAP21-3Q3LHN1 58 aa10.44□□□□□ -0.74
CNEP1R1-203ENST00000458059 A0A1B0GU33 70 aa10.43□□□□□ -0.74
CNEP1R1-203ENST00000458059 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
CNEP1R1-203ENST00000458059 RPS29P62273 56 aaKnown RBP10.41□□□□□ -0.74
CNEP1R1-203ENST00000458059 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
CNEP1R1-203ENST00000458059 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
CNEP1R1-203ENST00000458059 KRTAP10-4P60372 401 aaPredicted RBP10.35□□□□□ -0.75
CNEP1R1-203ENST00000458059 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
CNEP1R1-203ENST00000458059 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
CNEP1R1-203ENST00000458059 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
CNEP1R1-203ENST00000458059 A0A1B0GVY2 172 aa10.28□□□□□ -0.76
CNEP1R1-203ENST00000458059 HSPG2P98160 4391 aa10.27□□□□□ -0.77
CNEP1R1-203ENST00000458059 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
CNEP1R1-203ENST00000458059 A0A0D9SG42 100 aa10.2□□□□□ -0.78
CNEP1R1-203ENST00000458059 FAT3Q8TDW7 4589 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9579.7 ms