RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 A0A1W2PNM2 257 aa4.48□□□□□ -1.69
PKP4-207ENST00000457109 TRACP01848 142 aa4.48□□□□□ -1.69
PKP4-207ENST00000457109 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
PKP4-207ENST00000457109 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
PKP4-207ENST00000457109 J3QR89 54 aa4.46□□□□□ -1.7
PKP4-207ENST00000457109 TRIAP1O43715 76 aa4.46□□□□□ -1.7
PKP4-207ENST00000457109 CCKP06307 115 aa4.46□□□□□ -1.7
PKP4-207ENST00000457109 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.7
PKP4-207ENST00000457109 GTF2H5Q6ZYL4 71 aa4.46□□□□□ -1.7
PKP4-207ENST00000457109 J3KT08 172 aa4.45□□□□□ -1.7
PKP4-207ENST00000457109 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
PKP4-207ENST00000457109 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
PKP4-207ENST00000457109 C8orf87E5RJ46 101 aa4.43□□□□□ -1.7
PKP4-207ENST00000457109 SCGB1C2P0DMR2 95 aa4.43□□□□□ -1.7
PKP4-207ENST00000457109 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
PKP4-207ENST00000457109 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
PKP4-207ENST00000457109 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
PKP4-207ENST00000457109 RBM3P98179 157 aaKnown RBP4.42□□□□□ -1.7
PKP4-207ENST00000457109 LYRM7Q5U5X0 104 aa4.42□□□□□ -1.7
PKP4-207ENST00000457109 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
PKP4-207ENST00000457109 NDUFB1O75438 58 aa4.41□□□□□ -1.7
PKP4-207ENST00000457109 BATFQ16520 125 aa4.41□□□□□ -1.7
PKP4-207ENST00000457109 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
PKP4-207ENST00000457109 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
PKP4-207ENST00000457109 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
PKP4-207ENST00000457109 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
PKP4-207ENST00000457109 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
PKP4-207ENST00000457109 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
PKP4-207ENST00000457109 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
PKP4-207ENST00000457109 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.71
PKP4-207ENST00000457109 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
PKP4-207ENST00000457109 C9JAW5 83 aa4.39□□□□□ -1.71
PKP4-207ENST00000457109 HRES1P13985 223 aa4.39□□□□□ -1.71
PKP4-207ENST00000457109 MT2AP02795 61 aa4.38□□□□□ -1.71
PKP4-207ENST00000457109 MPLKIPQ8TAP9 179 aa4.37□□□□□ -1.71
PKP4-207ENST00000457109 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
PKP4-207ENST00000457109 H3BS24 57 aa4.36□□□□□ -1.71
PKP4-207ENST00000457109 TAX1BP3O14907 124 aa4.36□□□□□ -1.71
PKP4-207ENST00000457109 BAALC-AS2P0C853 105 aa4.36□□□□□ -1.71
PKP4-207ENST00000457109 SPINK7P58062 85 aa4.36□□□□□ -1.71
PKP4-207ENST00000457109 C9orf118A6NHY6 69 aa4.34□□□□□ -1.71
PKP4-207ENST00000457109 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
PKP4-207ENST00000457109 MT1FP04733 61 aa4.33□□□□□ -1.72
PKP4-207ENST00000457109 Q6ZQT0 140 aa4.33□□□□□ -1.72
PKP4-207ENST00000457109 A0A1B0GW54 56 aa4.32□□□□□ -1.72
PKP4-207ENST00000457109 A0A1W2PPM0 123 aa4.32□□□□□ -1.72
PKP4-207ENST00000457109 A8MWP4 228 aa4.32□□□□□ -1.72
PKP4-207ENST00000457109 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
PKP4-207ENST00000457109 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
PKP4-207ENST00000457109 PDE6GP18545 87 aa4.31□□□□□ -1.72
PKP4-207ENST00000457109 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
PKP4-207ENST00000457109 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
PKP4-207ENST00000457109 LCE2BO14633 110 aa4.3□□□□□ -1.72
PKP4-207ENST00000457109 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
PKP4-207ENST00000457109 C8orf17Q9NRJ1 99 aa4.3□□□□□ -1.72
PKP4-207ENST00000457109 NREPQ16612 68 aa4.29□□□□□ -1.72
PKP4-207ENST00000457109 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
PKP4-207ENST00000457109 Q6ZVQ6 151 aa4.28□□□□□ -1.72
PKP4-207ENST00000457109 USH2AO75445 5202 aa4.28□□□□□ -1.73
PKP4-207ENST00000457109 K7EP34 96 aa4.27□□□□□ -1.73
PKP4-207ENST00000457109 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
PKP4-207ENST00000457109 SPCS1Q9Y6A9 102 aa4.27□□□□□ -1.73
PKP4-207ENST00000457109 LOC110117498A0A087WWA1 95 aa4.26□□□□□ -1.73
PKP4-207ENST00000457109 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
PKP4-207ENST00000457109 NDUFS5O43920 106 aa4.26□□□□□ -1.73
PKP4-207ENST00000457109 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
PKP4-207ENST00000457109 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
PKP4-207ENST00000457109 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
PKP4-207ENST00000457109 H3BT86 120 aa4.24□□□□□ -1.73
PKP4-207ENST00000457109 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
PKP4-207ENST00000457109 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
PKP4-207ENST00000457109 C14orf132Q9NPU4 83 aa4.24□□□□□ -1.73
PKP4-207ENST00000457109 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
PKP4-207ENST00000457109 SMCPP49901 116 aaPredicted RBP4.23□□□□□ -1.73
PKP4-207ENST00000457109 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
PKP4-207ENST00000457109 PRO0461Q9UI25 63 aa4.23□□□□□ -1.73
PKP4-207ENST00000457109 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
PKP4-207ENST00000457109 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
PKP4-207ENST00000457109 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
PKP4-207ENST00000457109 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
PKP4-207ENST00000457109 F8W1H4 67 aa4.2□□□□□ -1.74
PKP4-207ENST00000457109 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
PKP4-207ENST00000457109 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
PKP4-207ENST00000457109 TMEM258P61165 79 aa4.19□□□□□ -1.74
PKP4-207ENST00000457109 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
PKP4-207ENST00000457109 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
PKP4-207ENST00000457109 BPY2O14599 106 aa4.18□□□□□ -1.74
PKP4-207ENST00000457109 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
PKP4-207ENST00000457109 MT-ATP8P03928 68 aa4.17□□□□□ -1.74
PKP4-207ENST00000457109 K7EQZ3 153 aa4.16□□□□□ -1.74
PKP4-207ENST00000457109 UQCRQO14949 82 aa4.16□□□□□ -1.74
PKP4-207ENST00000457109 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
PKP4-207ENST00000457109 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
PKP4-207ENST00000457109 CASC2Q6XLA1 102 aa4.14□□□□□ -1.75
PKP4-207ENST00000457109 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
PKP4-207ENST00000457109 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
PKP4-207ENST00000457109 HCG22E2RYF7 251 aa4.12□□□□□ -1.75
PKP4-207ENST00000457109 CXCL6P80162 114 aa4.12□□□□□ -1.75
PKP4-207ENST00000457109 ETDBQ3ZM63 59 aa4.11□□□□□ -1.75
PKP4-207ENST00000457109 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms