RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 A0A1B0GV90 55 aa7.57□□□□□ -1.2
SMPD4-215ENST00000457039 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
SMPD4-215ENST00000457039 NREPQ16612 68 aa7.56□□□□□ -1.2
SMPD4-215ENST00000457039 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
SMPD4-215ENST00000457039 Q75L30 129 aa7.56□□□□□ -1.2
SMPD4-215ENST00000457039 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
SMPD4-215ENST00000457039 A0A1B0GVX0 72 aa7.55□□□□□ -1.2
SMPD4-215ENST00000457039 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
SMPD4-215ENST00000457039 LINC00313P59037 77 aa7.55□□□□□ -1.2
SMPD4-215ENST00000457039 ETDBQ3ZM63 59 aa7.55□□□□□ -1.2
SMPD4-215ENST00000457039 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
SMPD4-215ENST00000457039 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
SMPD4-215ENST00000457039 A8MUU9 505 aa7.53□□□□□ -1.2
SMPD4-215ENST00000457039 A8MWP4 228 aa7.52□□□□□ -1.21
SMPD4-215ENST00000457039 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
SMPD4-215ENST00000457039 C8orf87E5RJ46 101 aa7.51□□□□□ -1.21
SMPD4-215ENST00000457039 IGKV3D-7A0A0C4DH55 119 aa7.5□□□□□ -1.21
SMPD4-215ENST00000457039 Q6ZVQ6 151 aa7.5□□□□□ -1.21
SMPD4-215ENST00000457039 NDUFB1O75438 58 aa7.49□□□□□ -1.21
SMPD4-215ENST00000457039 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
SMPD4-215ENST00000457039 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
SMPD4-215ENST00000457039 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
SMPD4-215ENST00000457039 BPY2O14599 106 aa7.45□□□□□ -1.22
SMPD4-215ENST00000457039 C8orf17Q9NRJ1 99 aa7.45□□□□□ -1.22
SMPD4-215ENST00000457039 K7EQZ3 153 aa7.43□□□□□ -1.22
SMPD4-215ENST00000457039 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
SMPD4-215ENST00000457039 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
SMPD4-215ENST00000457039 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
SMPD4-215ENST00000457039 Q8N9P0 234 aaPredicted RBP7.4□□□□□ -1.22
SMPD4-215ENST00000457039 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
SMPD4-215ENST00000457039 Q8N9L7 120 aa7.37□□□□□ -1.23
SMPD4-215ENST00000457039 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
SMPD4-215ENST00000457039 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
SMPD4-215ENST00000457039 ACYP1P07311 99 aa7.35□□□□□ -1.23
SMPD4-215ENST00000457039 hDV103S1A0JD37 113 aa7.34□□□□□ -1.23
SMPD4-215ENST00000457039 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
SMPD4-215ENST00000457039 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
SMPD4-215ENST00000457039 CXCL6P80162 114 aa7.32□□□□□ -1.24
SMPD4-215ENST00000457039 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
SMPD4-215ENST00000457039 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
SMPD4-215ENST00000457039 WFDC13Q8IUB5 93 aa7.29□□□□□ -1.24
SMPD4-215ENST00000457039 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SMPD4-215ENST00000457039 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
SMPD4-215ENST00000457039 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
SMPD4-215ENST00000457039 NDUFS5O43920 106 aa7.22□□□□□ -1.25
SMPD4-215ENST00000457039 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.25
SMPD4-215ENST00000457039 HRES1P13985 223 aa7.21□□□□□ -1.26
SMPD4-215ENST00000457039 K7ERU9 68 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 SPINK7P58062 85 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 MT1HP80294 61 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 MPLKIPQ8TAP9 179 aa7.2□□□□□ -1.26
SMPD4-215ENST00000457039 J3QR89 54 aa7.19□□□□□ -1.26
SMPD4-215ENST00000457039 Q5W150 140 aa7.19□□□□□ -1.26
SMPD4-215ENST00000457039 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
SMPD4-215ENST00000457039 HIST1H4AP62805 103 aaKnown RBP7.12□□□□□ -1.27
SMPD4-215ENST00000457039 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
SMPD4-215ENST00000457039 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
SMPD4-215ENST00000457039 A0A087WVE0 104 aa7.09□□□□□ -1.27
SMPD4-215ENST00000457039 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
SMPD4-215ENST00000457039 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
SMPD4-215ENST00000457039 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
SMPD4-215ENST00000457039 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
SMPD4-215ENST00000457039 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
SMPD4-215ENST00000457039 M0R2T5 61 aa7.01□□□□□ -1.29
SMPD4-215ENST00000457039 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
SMPD4-215ENST00000457039 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
SMPD4-215ENST00000457039 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
SMPD4-215ENST00000457039 UQCRQO14949 82 aa6.97□□□□□ -1.29
SMPD4-215ENST00000457039 MT-ATP8P03928 68 aa6.95□□□□□ -1.3
SMPD4-215ENST00000457039 OCR1Q9BZK8 76 aa6.95□□□□□ -1.3
SMPD4-215ENST00000457039 IMUPQ9GZP8 106 aa6.94□□□□□ -1.3
SMPD4-215ENST00000457039 C4orf26Q17RF5 130 aa6.93□□□□□ -1.3
SMPD4-215ENST00000457039 CYP4F30PQ9H0H9 118 aa6.93□□□□□ -1.3
SMPD4-215ENST00000457039 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
SMPD4-215ENST00000457039 H0Y9P7 68 aa6.91□□□□□ -1.3
SMPD4-215ENST00000457039 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
SMPD4-215ENST00000457039 ATOX1O00244 68 aa6.9□□□□□ -1.3
SMPD4-215ENST00000457039 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
SMPD4-215ENST00000457039 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
SMPD4-215ENST00000457039 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SMPD4-215ENST00000457039 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
SMPD4-215ENST00000457039 MP68P56378 58 aa6.83□□□□□ -1.32
SMPD4-215ENST00000457039 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
SMPD4-215ENST00000457039 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
SMPD4-215ENST00000457039 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
SMPD4-215ENST00000457039 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
SMPD4-215ENST00000457039 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
SMPD4-215ENST00000457039 MT2AP02795 61 aa6.79□□□□□ -1.32
SMPD4-215ENST00000457039 H3BPC8 53 aa6.78□□□□□ -1.32
SMPD4-215ENST00000457039 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
SMPD4-215ENST00000457039 KLKP1Q107X0 134 aa6.77□□□□□ -1.33
SMPD4-215ENST00000457039 SMIM20Q8N5G0 67 aa6.75□□□□□ -1.33
SMPD4-215ENST00000457039 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
SMPD4-215ENST00000457039 MT1FP04733 61 aa6.74□□□□□ -1.33
SMPD4-215ENST00000457039 S4R3F8 94 aa6.73□□□□□ -1.33
SMPD4-215ENST00000457039 ANAPC13Q9BS18 74 aa6.72□□□□□ -1.33
SMPD4-215ENST00000457039 LCA10Q71F78 164 aa6.71□□□□□ -1.34
SMPD4-215ENST00000457039 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms