RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 Q5XG85 94 aa2.51□□□□□ -2.01
PPP1R9A-208ENST00000456331 SPENQ96T58 3664 aaKnown RBP2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 PRR26Q8N8Z3 221 aa2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 EYSQ5T1H1 3165 aa2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 C9orf92A6NGG3 77 aa2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 ZFHX3Q15911 3703 aa2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 Q5VV11 94 aa2.5□□□□□ -2.01
PPP1R9A-208ENST00000456331 Q8N1X5 172 aa2.49□□□□□ -2.01
PPP1R9A-208ENST00000456331 R4GN34 69 aa2.48□□□□□ -2.01
PPP1R9A-208ENST00000456331 A0A0D9SG42 100 aa2.48□□□□□ -2.01
PPP1R9A-208ENST00000456331 Q5W150 140 aa2.47□□□□□ -2.01
PPP1R9A-208ENST00000456331 OXTP01178 125 aa2.47□□□□□ -2.01
PPP1R9A-208ENST00000456331 NBPF19A0A087WUL8 3843 aa2.46□□□□□ -2.02
PPP1R9A-208ENST00000456331 H1FX-AS1Q4G0G2 97 aa2.46□□□□□ -2.02
PPP1R9A-208ENST00000456331 SPATA8Q6RVD6 105 aa2.46□□□□□ -2.02
PPP1R9A-208ENST00000456331 NOTCH2NLQ7Z3S9 236 aa2.46□□□□□ -2.02
PPP1R9A-208ENST00000456331 M0QZ58 72 aa2.45□□□□□ -2.02
PPP1R9A-208ENST00000456331 SPINK7P58062 85 aa2.45□□□□□ -2.02
PPP1R9A-208ENST00000456331 SMG1Q96Q15 3661 aaKnown RBP2.45□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP10-3P60369 221 aa2.44□□□□□ -2.02
PPP1R9A-208ENST00000456331 H3BS24 57 aa2.44□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP1-3Q8IUG1 177 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 SPEGQ15772 3267 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP26-1Q6PEX3 210 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 LCE6AA0A183 80 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP16-1A8MUX0 517 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 CASC10Q5T4H9 136 aa2.43□□□□□ -2.02
PPP1R9A-208ENST00000456331 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP29-1A8MX34 341 aaPredicted RBP2.42□□□□□ -2.02
PPP1R9A-208ENST00000456331 ANAPC11Q9NYG5 84 aa2.42□□□□□ -2.02
PPP1R9A-208ENST00000456331 M0R2T5 61 aa2.41□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP1-1Q07627 177 aa2.41□□□□□ -2.02
PPP1R9A-208ENST00000456331 KRTAP4-16G5E9R7 235 aaPredicted RBP2.41□□□□□ -2.02
PPP1R9A-208ENST00000456331 PANO1I0J062 215 aa2.4□□□□□ -2.03
PPP1R9A-208ENST00000456331 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
PPP1R9A-208ENST00000456331 SMR3BP02814 79 aaPredicted RBP2.39□□□□□ -2.03
PPP1R9A-208ENST00000456331 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
PPP1R9A-208ENST00000456331 RELNP78509 3460 aa2.39□□□□□ -2.03
PPP1R9A-208ENST00000456331 DCHS1Q96JQ0 3298 aa2.39□□□□□ -2.03
PPP1R9A-208ENST00000456331 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
PPP1R9A-208ENST00000456331 MUC3AQ02505 3323 aa2.37□□□□□ -2.03
PPP1R9A-208ENST00000456331 A6NN06 94 aa2.37□□□□□ -2.03
PPP1R9A-208ENST00000456331 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
PPP1R9A-208ENST00000456331 PRAC1Q96KF2 57 aa2.35□□□□□ -2.03
PPP1R9A-208ENST00000456331 VPS13CQ709C8 3753 aa2.35□□□□□ -2.03
PPP1R9A-208ENST00000456331 CUBNO60494 3623 aa2.34□□□□□ -2.03
PPP1R9A-208ENST00000456331 CYSTM1Q9H1C7 97 aa2.34□□□□□ -2.03
PPP1R9A-208ENST00000456331 ADM2Q7Z4H4 148 aa2.34□□□□□ -2.03
PPP1R9A-208ENST00000456331 Q8NDZ9 215 aa2.34□□□□□ -2.03
PPP1R9A-208ENST00000456331 SVEP1Q4LDE5 3571 aa2.33□□□□□ -2.04
PPP1R9A-208ENST00000456331 Q5VSD8 79 aa2.33□□□□□ -2.04
PPP1R9A-208ENST00000456331 TNP1P09430 55 aa2.32□□□□□ -2.04
PPP1R9A-208ENST00000456331 A8MUU9 505 aa2.31□□□□□ -2.04
PPP1R9A-208ENST00000456331 KRTAP21-3Q3LHN1 58 aa2.3□□□□□ -2.04
PPP1R9A-208ENST00000456331 AKAP9Q99996 3911 aa2.3□□□□□ -2.04
PPP1R9A-208ENST00000456331 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
PPP1R9A-208ENST00000456331 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
PPP1R9A-208ENST00000456331 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
PPP1R9A-208ENST00000456331 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
PPP1R9A-208ENST00000456331 KRTAP1-5Q9BYS1 174 aa2.28□□□□□ -2.05
PPP1R9A-208ENST00000456331 KRTAP11-1Q8IUC1 163 aa2.27□□□□□ -2.05
PPP1R9A-208ENST00000456331 KRTAP10-2P60368 255 aa2.23□□□□□ -2.05
PPP1R9A-208ENST00000456331 CSMD2Q7Z408 3487 aa2.23□□□□□ -2.05
PPP1R9A-208ENST00000456331 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
PPP1R9A-208ENST00000456331 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
PPP1R9A-208ENST00000456331 BSNQ9UPA5 3926 aa2.19□□□□□ -2.06
PPP1R9A-208ENST00000456331 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
PPP1R9A-208ENST00000456331 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
PPP1R9A-208ENST00000456331 P0C880 135 aa2.19□□□□□ -2.06
PPP1R9A-208ENST00000456331 A8MU10 97 aa2.18□□□□□ -2.06
PPP1R9A-208ENST00000456331 C10orf95Q9H7T3 257 aa2.17□□□□□ -2.06
PPP1R9A-208ENST00000456331 KRTAP7-1Q8IUC3 87 aa2.17□□□□□ -2.06
PPP1R9A-208ENST00000456331 H0YAA0 97 aa2.15□□□□□ -2.07
PPP1R9A-208ENST00000456331 XP32Q5T750 250 aa2.13□□□□□ -2.07
PPP1R9A-208ENST00000456331 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
PPP1R9A-208ENST00000456331 LYSTQ99698 3801 aa2.11□□□□□ -2.07
PPP1R9A-208ENST00000456331 KRTAP1-4P0C5Y4 121 aa2.1□□□□□ -2.07
PPP1R9A-208ENST00000456331 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
PPP1R9A-208ENST00000456331 CSMD3Q7Z407 3707 aa2.09□□□□□ -2.08
PPP1R9A-208ENST00000456331 INE1O15225 51 aa2.08□□□□□ -2.08
PPP1R9A-208ENST00000456331 DNHD1Q96M86 4753 aa2.08□□□□□ -2.08
PPP1R9A-208ENST00000456331 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
PPP1R9A-208ENST00000456331 KRTAP13-3Q3SY46 172 aa2.06□□□□□ -2.08
PPP1R9A-208ENST00000456331 KRTAP23-1A1A580 65 aa2.03□□□□□ -2.09
PPP1R9A-208ENST00000456331 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
PPP1R9A-208ENST00000456331 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
PPP1R9A-208ENST00000456331 ZNF469Q96JG9 3925 aaPredicted RBP1.97□□□□□ -2.09
PPP1R9A-208ENST00000456331 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
PPP1R9A-208ENST00000456331 KRTAP12-2P59991 146 aa1.95□□□□□ -2.1
PPP1R9A-208ENST00000456331 ANK2Q01484 3957 aa1.95□□□□□ -2.1
PPP1R9A-208ENST00000456331 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
PPP1R9A-208ENST00000456331 KRTAP3-3Q9BYR6 98 aa1.93□□□□□ -2.1
PPP1R9A-208ENST00000456331 KRTAP3-2Q9BYR7 98 aa1.93□□□□□ -2.1
PPP1R9A-208ENST00000456331 KRTAP17-1Q9BYP8 105 aa1.93□□□□□ -2.1
PPP1R9A-208ENST00000456331 KRTAP15-1Q3LI76 137 aa1.91□□□□□ -2.1
PPP1R9A-208ENST00000456331 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
PPP1R9A-208ENST00000456331 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
PPP1R9A-208ENST00000456331 CMYA5Q8N3K9 4069 aa1.87□□□□□ -2.11
PPP1R9A-208ENST00000456331 KRTAP10-6P60371 365 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms