RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 UBL5Q9BZL1 73 aa7.78□□□□□ -1.16
HMGXB4-204ENST00000455359 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
HMGXB4-204ENST00000455359 A8MWP4 228 aa7.78□□□□□ -1.16
HMGXB4-204ENST00000455359 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
HMGXB4-204ENST00000455359 Q6ZVQ6 151 aa7.78□□□□□ -1.16
HMGXB4-204ENST00000455359 LINC00313P59037 77 aa7.77□□□□□ -1.17
HMGXB4-204ENST00000455359 LINC00846Q9NV44 126 aa7.77□□□□□ -1.17
HMGXB4-204ENST00000455359 BPY2O14599 106 aa7.76□□□□□ -1.17
HMGXB4-204ENST00000455359 ACYP1P07311 99 aa7.76□□□□□ -1.17
HMGXB4-204ENST00000455359 IGHV6-1A0A0B4J1U7 121 aa7.75□□□□□ -1.17
HMGXB4-204ENST00000455359 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
HMGXB4-204ENST00000455359 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
HMGXB4-204ENST00000455359 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-204ENST00000455359 DSCR10P59022 87 aa7.73□□□□□ -1.17
HMGXB4-204ENST00000455359 Q75L30 129 aa7.73□□□□□ -1.17
HMGXB4-204ENST00000455359 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
HMGXB4-204ENST00000455359 IGKV3D-7A0A0C4DH55 119 aa7.72□□□□□ -1.17
HMGXB4-204ENST00000455359 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
HMGXB4-204ENST00000455359 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
HMGXB4-204ENST00000455359 A8MUU9 505 aa7.69□□□□□ -1.18
HMGXB4-204ENST00000455359 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
HMGXB4-204ENST00000455359 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
HMGXB4-204ENST00000455359 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
HMGXB4-204ENST00000455359 J3QR89 54 aa7.66□□□□□ -1.18
HMGXB4-204ENST00000455359 CXCL6P80162 114 aa7.66□□□□□ -1.18
HMGXB4-204ENST00000455359 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
HMGXB4-204ENST00000455359 K7EQZ3 153 aa7.65□□□□□ -1.18
HMGXB4-204ENST00000455359 PCOTHQ58A44 107 aa7.65□□□□□ -1.18
HMGXB4-204ENST00000455359 ATP5EP2Q5VTU8 51 aa7.62□□□□□ -1.19
HMGXB4-204ENST00000455359 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
HMGXB4-204ENST00000455359 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-204ENST00000455359 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
HMGXB4-204ENST00000455359 MUC2Q02817 5179 aa7.61□□□□□ -1.19
HMGXB4-204ENST00000455359 hDV103S1A0JD37 113 aa7.59□□□□□ -1.19
HMGXB4-204ENST00000455359 Q8N9L7 120 aa7.58□□□□□ -1.2
HMGXB4-204ENST00000455359 LINC00643Q86TS7 51 aa7.57□□□□□ -1.2
HMGXB4-204ENST00000455359 MRPL34Q9BQ48 92 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-204ENST00000455359 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
HMGXB4-204ENST00000455359 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
HMGXB4-204ENST00000455359 HCG22E2RYF7 251 aa7.53□□□□□ -1.2
HMGXB4-204ENST00000455359 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.2
HMGXB4-204ENST00000455359 K7ERU9 68 aa7.52□□□□□ -1.21
HMGXB4-204ENST00000455359 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-204ENST00000455359 WFDC13Q8IUB5 93 aa7.51□□□□□ -1.21
HMGXB4-204ENST00000455359 NDUFS5O43920 106 aa7.47□□□□□ -1.21
HMGXB4-204ENST00000455359 HIST1H4AP62805 103 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-204ENST00000455359 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
HMGXB4-204ENST00000455359 FAT4Q6V0I7 4981 aa7.41□□□□□ -1.22
HMGXB4-204ENST00000455359 SPINK7P58062 85 aa7.37□□□□□ -1.23
HMGXB4-204ENST00000455359 Q5W150 140 aa7.35□□□□□ -1.23
HMGXB4-204ENST00000455359 IMUPQ9GZP8 106 aa7.35□□□□□ -1.23
HMGXB4-204ENST00000455359 A0A087WVE0 104 aa7.34□□□□□ -1.23
HMGXB4-204ENST00000455359 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
HMGXB4-204ENST00000455359 HRES1P13985 223 aa7.31□□□□□ -1.24
HMGXB4-204ENST00000455359 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
HMGXB4-204ENST00000455359 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
HMGXB4-204ENST00000455359 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
HMGXB4-204ENST00000455359 RBM12B-AS1Q9P1G2 102 aa7.3□□□□□ -1.24
HMGXB4-204ENST00000455359 UQCRQO14949 82 aa7.29□□□□□ -1.24
HMGXB4-204ENST00000455359 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
HMGXB4-204ENST00000455359 MT-ATP8P03928 68 aa7.27□□□□□ -1.24
HMGXB4-204ENST00000455359 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
HMGXB4-204ENST00000455359 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
HMGXB4-204ENST00000455359 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
HMGXB4-204ENST00000455359 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
HMGXB4-204ENST00000455359 ATOX1O00244 68 aa7.24□□□□□ -1.25
HMGXB4-204ENST00000455359 SCGB1A1P11684 91 aa7.23□□□□□ -1.25
HMGXB4-204ENST00000455359 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
HMGXB4-204ENST00000455359 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
HMGXB4-204ENST00000455359 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
HMGXB4-204ENST00000455359 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-204ENST00000455359 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
HMGXB4-204ENST00000455359 MT1HP80294 61 aa7.19□□□□□ -1.26
HMGXB4-204ENST00000455359 H0Y9P7 68 aa7.18□□□□□ -1.26
HMGXB4-204ENST00000455359 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
HMGXB4-204ENST00000455359 MP68P56378 58 aa7.17□□□□□ -1.26
HMGXB4-204ENST00000455359 SMIM20Q8N5G0 67 aa7.17□□□□□ -1.26
HMGXB4-204ENST00000455359 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
HMGXB4-204ENST00000455359 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
HMGXB4-204ENST00000455359 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
HMGXB4-204ENST00000455359 H3BPC8 53 aa7.14□□□□□ -1.27
HMGXB4-204ENST00000455359 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
HMGXB4-204ENST00000455359 M0R2T5 61 aa7.1□□□□□ -1.27
HMGXB4-204ENST00000455359 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
HMGXB4-204ENST00000455359 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
HMGXB4-204ENST00000455359 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
HMGXB4-204ENST00000455359 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
HMGXB4-204ENST00000455359 LCE2BO14633 110 aa7.03□□□□□ -1.28
HMGXB4-204ENST00000455359 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
HMGXB4-204ENST00000455359 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
HMGXB4-204ENST00000455359 SERP2Q8N6R1 65 aa7□□□□□ -1.29
HMGXB4-204ENST00000455359 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-204ENST00000455359 KLKP1Q107X0 134 aa6.98□□□□□ -1.29
HMGXB4-204ENST00000455359 A8MUN3 132 aa6.97□□□□□ -1.29
HMGXB4-204ENST00000455359 S4R3F8 94 aa6.91□□□□□ -1.3
HMGXB4-204ENST00000455359 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
HMGXB4-204ENST00000455359 COX7CP15954 63 aa6.86□□□□□ -1.31
HMGXB4-204ENST00000455359 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
HMGXB4-204ENST00000455359 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
HMGXB4-204ENST00000455359 LCA10Q71F78 164 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms