RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 WFDC13Q8IUB5 93 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 EPPK1P58107 5090 aaKnown RBP9.56□□□□□ -0.88
SNX17-204ENST00000453453 A8MWP4 228 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 LINC00208Q96KT6 92 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
SNX17-204ENST00000453453 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
SNX17-204ENST00000453453 PSPHP1O15172 72 aa9.53□□□□□ -0.88
SNX17-204ENST00000453453 SEC61GP60059 68 aa9.53□□□□□ -0.88
SNX17-204ENST00000453453 BIRC6Q9NR09 4857 aa9.52□□□□□ -0.88
SNX17-204ENST00000453453 Q5VV11 94 aa9.51□□□□□ -0.89
SNX17-204ENST00000453453 LINC00472Q9H8W2 130 aa9.51□□□□□ -0.89
SNX17-204ENST00000453453 A8MUN3 132 aa9.49□□□□□ -0.89
SNX17-204ENST00000453453 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
SNX17-204ENST00000453453 SPINK6Q6UWN8 80 aa9.49□□□□□ -0.89
SNX17-204ENST00000453453 PRR4Q16378 134 aa9.48□□□□□ -0.89
SNX17-204ENST00000453453 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
SNX17-204ENST00000453453 IGLV7-46A0A075B6I9 117 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 Q5VSD8 79 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 Q75L30 129 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 DEFB116Q30KQ4 102 aa9.45□□□□□ -0.9
SNX17-204ENST00000453453 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
SNX17-204ENST00000453453 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
SNX17-204ENST00000453453 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
SNX17-204ENST00000453453 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
SNX17-204ENST00000453453 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
SNX17-204ENST00000453453 MOBPQ13875 183 aa9.42□□□□□ -0.9
SNX17-204ENST00000453453 ASB16-AS1Q495Z4 193 aa9.42□□□□□ -0.9
SNX17-204ENST00000453453 Q8N1X5 172 aa9.41□□□□□ -0.9
SNX17-204ENST00000453453 IGLV9-49A0A0B4J1Y8 123 aa9.39□□□□□ -0.91
SNX17-204ENST00000453453 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
SNX17-204ENST00000453453 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
SNX17-204ENST00000453453 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
SNX17-204ENST00000453453 HSPG2P98160 4391 aa9.39□□□□□ -0.91
SNX17-204ENST00000453453 COA5Q86WW8 74 aa9.38□□□□□ -0.91
SNX17-204ENST00000453453 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
SNX17-204ENST00000453453 RYR1P21817 5038 aa9.37□□□□□ -0.91
SNX17-204ENST00000453453 FAT1Q14517 4588 aa9.37□□□□□ -0.91
SNX17-204ENST00000453453 CD164Q04900 197 aa9.37□□□□□ -0.91
SNX17-204ENST00000453453 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
SNX17-204ENST00000453453 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
SNX17-204ENST00000453453 KTN1-AS1Q86SY8 53 aa9.32□□□□□ -0.92
SNX17-204ENST00000453453 NDUFS5O43920 106 aa9.31□□□□□ -0.92
SNX17-204ENST00000453453 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
SNX17-204ENST00000453453 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
SNX17-204ENST00000453453 CDC42SE1Q9NRR8 79 aa9.31□□□□□ -0.92
SNX17-204ENST00000453453 A0A087X002 238 aa9.3□□□□□ -0.92
SNX17-204ENST00000453453 Q96NJ1 140 aa9.29□□□□□ -0.92
SNX17-204ENST00000453453 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
SNX17-204ENST00000453453 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.92
SNX17-204ENST00000453453 PKHD1L1Q86WI1 4243 aa9.27□□□□□ -0.93
SNX17-204ENST00000453453 A6NED7 52 aa9.27□□□□□ -0.93
SNX17-204ENST00000453453 TYMSOSQ8TAI1 123 aa9.26□□□□□ -0.93
SNX17-204ENST00000453453 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
SNX17-204ENST00000453453 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
SNX17-204ENST00000453453 LCA10Q71F78 164 aa9.25□□□□□ -0.93
SNX17-204ENST00000453453 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
SNX17-204ENST00000453453 A6NN06 94 aa9.23□□□□□ -0.93
SNX17-204ENST00000453453 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.93
SNX17-204ENST00000453453 A8MU10 97 aa9.2□□□□□ -0.94
SNX17-204ENST00000453453 HERC2O95714 4834 aa9.2□□□□□ -0.94
SNX17-204ENST00000453453 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
SNX17-204ENST00000453453 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
SNX17-204ENST00000453453 HRES1P13985 223 aa9.16□□□□□ -0.94
SNX17-204ENST00000453453 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
SNX17-204ENST00000453453 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
SNX17-204ENST00000453453 SPAG11AQ6PDA7 123 aa9.15□□□□□ -0.94
SNX17-204ENST00000453453 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
SNX17-204ENST00000453453 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
SNX17-204ENST00000453453 SPINK1P00995 79 aa9.12□□□□□ -0.95
SNX17-204ENST00000453453 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
SNX17-204ENST00000453453 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
SNX17-204ENST00000453453 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
SNX17-204ENST00000453453 RBM12B-AS1Q9P1G2 102 aa9.09□□□□□ -0.95
SNX17-204ENST00000453453 KRTAP13-3Q3SY46 172 aa9.08□□□□□ -0.96
SNX17-204ENST00000453453 C8orf87E5RJ46 101 aa9.07□□□□□ -0.96
SNX17-204ENST00000453453 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
SNX17-204ENST00000453453 ACYP2P14621 99 aa9.05□□□□□ -0.96
SNX17-204ENST00000453453 SPINK7P58062 85 aa9.03□□□□□ -0.96
SNX17-204ENST00000453453 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.96
SNX17-204ENST00000453453 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
SNX17-204ENST00000453453 MT1HL1P0DM35 61 aa9□□□□□ -0.97
SNX17-204ENST00000453453 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
SNX17-204ENST00000453453 TNXBP22105 4242 aa8.96□□□□□ -0.98
SNX17-204ENST00000453453 J3QL48 77 aa8.95□□□□□ -0.98
SNX17-204ENST00000453453 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
SNX17-204ENST00000453453 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
SNX17-204ENST00000453453 Q5W150 140 aa8.94□□□□□ -0.98
SNX17-204ENST00000453453 MYCBP2O75592 4640 aa8.94□□□□□ -0.98
SNX17-204ENST00000453453 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
SNX17-204ENST00000453453 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
SNX17-204ENST00000453453 DMBT1Q9UGM3 2413 aaPredicted RBP8.87□□□□□ -0.99
SNX17-204ENST00000453453 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
SNX17-204ENST00000453453 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
SNX17-204ENST00000453453 A0A1B0GU69 56 aa8.84□□□□□ -0.99
SNX17-204ENST00000453453 LINC00313P59037 77 aa8.83□□□□□ -1
SNX17-204ENST00000453453 UQCR11O14957 56 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms