RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 TNP1P09430 55 aa0.43□□□□□ -2.34
TRGVB-201ENST00000453257 LEAP2Q969E1 77 aa0.43□□□□□ -2.34
TRGVB-201ENST00000453257 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
TRGVB-201ENST00000453257 KMT2DO14686 5537 aa0.43□□□□□ -2.34
TRGVB-201ENST00000453257 PKD1L2Q7Z442 2459 aa0.42□□□□□ -2.34
TRGVB-201ENST00000453257 H3BNG1 76 aa0.42□□□□□ -2.34
TRGVB-201ENST00000453257 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
TRGVB-201ENST00000453257 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 CREBBPQ92793 2442 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 SPRR2BP35325 72 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 TOMM7Q9P0U1 55 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 UBR5O95071 2799 aaPredicted RBP0.41□□□□□ -2.34
TRGVB-201ENST00000453257 UNC79Q9P2D8 2635 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 CHD8Q9HCK8 2581 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 DNAH11Q96DT5 4516 aa0.41□□□□□ -2.34
TRGVB-201ENST00000453257 PDZD2O15018 2839 aa0.4□□□□□ -2.35
TRGVB-201ENST00000453257 LYSTQ99698 3801 aa0.4□□□□□ -2.35
TRGVB-201ENST00000453257 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
TRGVB-201ENST00000453257 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
TRGVB-201ENST00000453257 VPS13BQ7Z7G8 4022 aa0.39□□□□□ -2.35
TRGVB-201ENST00000453257 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
TRGVB-201ENST00000453257 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
TRGVB-201ENST00000453257 KMT2AQ03164 3969 aa0.38□□□□□ -2.35
TRGVB-201ENST00000453257 PTPN13Q12923 2485 aa0.38□□□□□ -2.35
TRGVB-201ENST00000453257 ACANP16112 2415 aa0.38□□□□□ -2.35
TRGVB-201ENST00000453257 LPAP08519 4548 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 VPS13DQ5THJ4 4388 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 DEFB110Q30KQ9 67 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 LINC01590Q5TEZ4 76 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 MAP1BP46821 2468 aaKnown RBP0.37□□□□□ -2.35
TRGVB-201ENST00000453257 PKD1P98161 4303 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 NBASA2RRP1 2371 aa0.37□□□□□ -2.35
TRGVB-201ENST00000453257 SETD2Q9BYW2 2564 aaPredicted RBP0.36□□□□□ -2.35
TRGVB-201ENST00000453257 PRCDQ00LT1 54 aa0.36□□□□□ -2.35
TRGVB-201ENST00000453257 TTTY10Q9BZA0 68 aa0.36□□□□□ -2.35
TRGVB-201ENST00000453257 WNK1Q9H4A3 2382 aa0.36□□□□□ -2.35
TRGVB-201ENST00000453257 COL6A5A8TX70 2615 aa0.36□□□□□ -2.35
TRGVB-201ENST00000453257 SETXQ7Z333 2677 aaKnown RBP0.35□□□□□ -2.35
TRGVB-201ENST00000453257 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
TRGVB-201ENST00000453257 NAV2Q8IVL1 2488 aa0.35□□□□□ -2.35
TRGVB-201ENST00000453257 SPRR2AP35326 72 aa0.35□□□□□ -2.35
TRGVB-201ENST00000453257 NF1P21359 2839 aa0.35□□□□□ -2.35
TRGVB-201ENST00000453257 HSPG2P98160 4391 aa0.35□□□□□ -2.35
TRGVB-201ENST00000453257 ANK3Q12955 4377 aaKnown RBP0.35□□□□□ -2.35
TRGVB-201ENST00000453257 GCN1Q92616 2671 aaKnown RBP0.34□□□□□ -2.35
TRGVB-201ENST00000453257 FLNCQ14315 2725 aa0.34□□□□□ -2.35
TRGVB-201ENST00000453257 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
TRGVB-201ENST00000453257 NSD1Q96L73 2696 aaPredicted RBP0.34□□□□□ -2.36
TRGVB-201ENST00000453257 DNAH2Q9P225 4427 aa0.34□□□□□ -2.36
TRGVB-201ENST00000453257 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
TRGVB-201ENST00000453257 SPTBN4Q9H254 2564 aa0.33□□□□□ -2.36
TRGVB-201ENST00000453257 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
TRGVB-201ENST00000453257 PKHD1L1Q86WI1 4243 aa0.33□□□□□ -2.36
TRGVB-201ENST00000453257 DNAH3Q8TD57 4116 aa0.33□□□□□ -2.36
TRGVB-201ENST00000453257 TACC2O95359 2948 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 CHD7Q9P2D1 2997 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 MT1AP04731 61 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 SPART-AS1P0CW21 52 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 DYNC2H1Q8NCM8 4307 aaKnown RBP0.32□□□□□ -2.36
TRGVB-201ENST00000453257 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 CUBNO60494 3623 aa0.32□□□□□ -2.36
TRGVB-201ENST00000453257 FLNBO75369 2602 aaKnown RBP0.32□□□□□ -2.36
TRGVB-201ENST00000453257 ZZEF1O43149 2961 aa0.31□□□□□ -2.36
TRGVB-201ENST00000453257 APC2O95996 2303 aa0.31□□□□□ -2.36
TRGVB-201ENST00000453257 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
TRGVB-201ENST00000453257 NCOR2Q9Y618 2525 aa0.31□□□□□ -2.36
TRGVB-201ENST00000453257 APOBP04114 4563 aaKnown RBP0.31□□□□□ -2.36
TRGVB-201ENST00000453257 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 ACACAQ13085 2346 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 DEFB104AQ8WTQ1 72 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
TRGVB-201ENST00000453257 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 DNAH8Q96JB1 4490 aa0.3□□□□□ -2.36
TRGVB-201ENST00000453257 SONP18583 2426 aaKnown RBP0.29□□□□□ -2.36
TRGVB-201ENST00000453257 DNAH9Q9NYC9 4486 aa0.29□□□□□ -2.36
TRGVB-201ENST00000453257 RANBP2P49792 3224 aaKnown RBP0.29□□□□□ -2.36
TRGVB-201ENST00000453257 SPENQ96T58 3664 aaKnown RBP0.29□□□□□ -2.36
TRGVB-201ENST00000453257 H3BSH0 61 aa0.29□□□□□ -2.36
TRGVB-201ENST00000453257 K7EIM0 57 aa0.29□□□□□ -2.36
TRGVB-201ENST00000453257 SPRR2EP22531 72 aa0.29□□□□□ -2.36
TRGVB-201ENST00000453257 MTORP42345 2549 aa0.29□□□□□ -2.36
TRGVB-201ENST00000453257 ANKRD11Q6UB99 2663 aaPredicted RBP0.29□□□□□ -2.36
TRGVB-201ENST00000453257 HECTD4Q9Y4D8 3996 aa0.28□□□□□ -2.36
TRGVB-201ENST00000453257 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 ZANQ9Y493 2812 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 KRTAP19-5Q3LI72 72 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 SPRR2FQ96RM1 72 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 CCDC168Q8NDH2 2452 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 HMCN2Q8NDA2 5059 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 CRYBG3Q68DQ2 2970 aa0.27□□□□□ -2.37
TRGVB-201ENST00000453257 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
TRGVB-201ENST00000453257 ACACBO00763 2458 aa0.26□□□□□ -2.37
TRGVB-201ENST00000453257 ANKHD1Q8IWZ3 2542 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms