RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 LPAP08519 4548 aa8.07□□□□□ -1.12
TRAPPC12-211ENST00000452495 KRTAP9-9Q9BYP9 154 aa8.04□□□□□ -1.12
TRAPPC12-211ENST00000452495 KRTAP9-4Q9BYQ2 154 aa8.04□□□□□ -1.12
TRAPPC12-211ENST00000452495 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
TRAPPC12-211ENST00000452495 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
TRAPPC12-211ENST00000452495 C9orf92A6NGG3 77 aa8□□□□□ -1.13
TRAPPC12-211ENST00000452495 IGKV4-1P06312 121 aa8□□□□□ -1.13
TRAPPC12-211ENST00000452495 UBR4Q5T4S7 5183 aa7.99□□□□□ -1.13
TRAPPC12-211ENST00000452495 J3KT08 172 aa7.99□□□□□ -1.13
TRAPPC12-211ENST00000452495 A0A1B0GV90 55 aa7.98□□□□□ -1.13
TRAPPC12-211ENST00000452495 ETDBQ3ZM63 59 aa7.97□□□□□ -1.13
TRAPPC12-211ENST00000452495 NREPQ16612 68 aa7.95□□□□□ -1.14
TRAPPC12-211ENST00000452495 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
TRAPPC12-211ENST00000452495 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-211ENST00000452495 A0A1B0GVX0 72 aa7.91□□□□□ -1.14
TRAPPC12-211ENST00000452495 A8MWP4 228 aa7.89□□□□□ -1.15
TRAPPC12-211ENST00000452495 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
TRAPPC12-211ENST00000452495 NDUFB1O75438 58 aa7.89□□□□□ -1.15
TRAPPC12-211ENST00000452495 Q6ZVQ6 151 aa7.89□□□□□ -1.15
TRAPPC12-211ENST00000452495 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 DSCR10P59022 87 aa7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 LINC00313P59037 77 aa7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
TRAPPC12-211ENST00000452495 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
TRAPPC12-211ENST00000452495 BPY2O14599 106 aa7.86□□□□□ -1.15
TRAPPC12-211ENST00000452495 Q75L30 129 aa7.86□□□□□ -1.15
TRAPPC12-211ENST00000452495 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
TRAPPC12-211ENST00000452495 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
TRAPPC12-211ENST00000452495 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
TRAPPC12-211ENST00000452495 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
TRAPPC12-211ENST00000452495 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
TRAPPC12-211ENST00000452495 ACYP1P07311 99 aa7.82□□□□□ -1.16
TRAPPC12-211ENST00000452495 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
TRAPPC12-211ENST00000452495 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
TRAPPC12-211ENST00000452495 RNF213Q63HN8 5207 aa7.82□□□□□ -1.16
TRAPPC12-211ENST00000452495 A8MUU9 505 aa7.81□□□□□ -1.16
TRAPPC12-211ENST00000452495 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
TRAPPC12-211ENST00000452495 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
TRAPPC12-211ENST00000452495 K7EQZ3 153 aa7.79□□□□□ -1.16
TRAPPC12-211ENST00000452495 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
TRAPPC12-211ENST00000452495 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
TRAPPC12-211ENST00000452495 CXCL6P80162 114 aa7.75□□□□□ -1.17
TRAPPC12-211ENST00000452495 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC12-211ENST00000452495 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
TRAPPC12-211ENST00000452495 J3QR89 54 aa7.71□□□□□ -1.18
TRAPPC12-211ENST00000452495 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
TRAPPC12-211ENST00000452495 Q8N9L7 120 aa7.71□□□□□ -1.18
TRAPPC12-211ENST00000452495 KRTAP4-1Q9BYQ7 146 aa7.71□□□□□ -1.18
TRAPPC12-211ENST00000452495 A0A0U1RQV1 116 aa7.7□□□□□ -1.18
TRAPPC12-211ENST00000452495 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
TRAPPC12-211ENST00000452495 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
TRAPPC12-211ENST00000452495 MUC2Q02817 5179 aa7.67□□□□□ -1.18
TRAPPC12-211ENST00000452495 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
TRAPPC12-211ENST00000452495 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
TRAPPC12-211ENST00000452495 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
TRAPPC12-211ENST00000452495 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
TRAPPC12-211ENST00000452495 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
TRAPPC12-211ENST00000452495 ZCCHC13Q8WW36 166 aaKnown RBP7.64□□□□□ -1.19
TRAPPC12-211ENST00000452495 NDUFS5O43920 106 aa7.6□□□□□ -1.19
TRAPPC12-211ENST00000452495 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
TRAPPC12-211ENST00000452495 K7ERU9 68 aa7.57□□□□□ -1.2
TRAPPC12-211ENST00000452495 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-211ENST00000452495 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
TRAPPC12-211ENST00000452495 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
TRAPPC12-211ENST00000452495 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
TRAPPC12-211ENST00000452495 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
TRAPPC12-211ENST00000452495 SPINK7P58062 85 aa7.48□□□□□ -1.21
TRAPPC12-211ENST00000452495 A0A087WVE0 104 aa7.46□□□□□ -1.22
TRAPPC12-211ENST00000452495 Q5W150 140 aa7.46□□□□□ -1.22
TRAPPC12-211ENST00000452495 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
TRAPPC12-211ENST00000452495 HRES1P13985 223 aa7.45□□□□□ -1.22
TRAPPC12-211ENST00000452495 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
TRAPPC12-211ENST00000452495 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
TRAPPC12-211ENST00000452495 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
TRAPPC12-211ENST00000452495 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
TRAPPC12-211ENST00000452495 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
TRAPPC12-211ENST00000452495 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
TRAPPC12-211ENST00000452495 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
TRAPPC12-211ENST00000452495 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
TRAPPC12-211ENST00000452495 FAM236DA0A1B0GTK5 79 aa7.37□□□□□ -1.23
TRAPPC12-211ENST00000452495 UQCRQO14949 82 aa7.37□□□□□ -1.23
TRAPPC12-211ENST00000452495 FAM236CP0DP71 79 aa7.37□□□□□ -1.23
TRAPPC12-211ENST00000452495 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
TRAPPC12-211ENST00000452495 MT1HP80294 61 aa7.36□□□□□ -1.23
TRAPPC12-211ENST00000452495 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
TRAPPC12-211ENST00000452495 ATOX1O00244 68 aa7.32□□□□□ -1.24
TRAPPC12-211ENST00000452495 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
TRAPPC12-211ENST00000452495 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
TRAPPC12-211ENST00000452495 H0Y9P7 68 aa7.29□□□□□ -1.24
TRAPPC12-211ENST00000452495 H3BS24 57 aa7.29□□□□□ -1.24
TRAPPC12-211ENST00000452495 KRTAP4-2Q9BYR5 136 aa7.29□□□□□ -1.24
TRAPPC12-211ENST00000452495 SCGB1A1P11684 91 aa7.28□□□□□ -1.24
TRAPPC12-211ENST00000452495 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-211ENST00000452495 FAM236AA0A1B0GUQ0 79 aa7.25□□□□□ -1.25
TRAPPC12-211ENST00000452495 FAM236BA0A1B0GV22 79 aa7.25□□□□□ -1.25
TRAPPC12-211ENST00000452495 M0R2T5 61 aa7.25□□□□□ -1.25
TRAPPC12-211ENST00000452495 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
TRAPPC12-211ENST00000452495 MP68P56378 58 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms