RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LINC00483Q53H64 154 aa3.98□□□□□ -1.77
USP46-202ENST00000451218 H3BPC8 53 aa3.98□□□□□ -1.77
USP46-202ENST00000451218 LINC00643Q86TS7 51 aa3.98□□□□□ -1.77
USP46-202ENST00000451218 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
USP46-202ENST00000451218 PRR4Q16378 134 aa3.98□□□□□ -1.77
USP46-202ENST00000451218 SSBP3-AS1Q7Z2R9 100 aa3.97□□□□□ -1.77
USP46-202ENST00000451218 Q8NBF4 154 aa3.96□□□□□ -1.77
USP46-202ENST00000451218 HRES1P13985 223 aa3.96□□□□□ -1.78
USP46-202ENST00000451218 IGLV9-49A0A0B4J1Y8 123 aa3.96□□□□□ -1.78
USP46-202ENST00000451218 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
USP46-202ENST00000451218 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 BCE1O60756 84 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 Q5XG85 94 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 PSORS1C2Q9UIG4 136 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 IGFL1Q6UW32 110 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 A0A087WVE0 104 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 Q96NJ1 140 aa3.95□□□□□ -1.78
USP46-202ENST00000451218 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
USP46-202ENST00000451218 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
USP46-202ENST00000451218 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
USP46-202ENST00000451218 LINC00313P59037 77 aa3.93□□□□□ -1.78
USP46-202ENST00000451218 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
USP46-202ENST00000451218 CXCL6P80162 114 aa3.92□□□□□ -1.78
USP46-202ENST00000451218 DSCR10P59022 87 aa3.92□□□□□ -1.78
USP46-202ENST00000451218 IGKV3D-7A0A0C4DH55 119 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 A6NED7 52 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 UQCRQO14949 82 aa3.91□□□□□ -1.78
USP46-202ENST00000451218 LCE6AA0A183 80 aa3.9□□□□□ -1.79
USP46-202ENST00000451218 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
USP46-202ENST00000451218 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
USP46-202ENST00000451218 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
USP46-202ENST00000451218 ANAPC11Q9NYG5 84 aa3.89□□□□□ -1.79
USP46-202ENST00000451218 LINC00472Q9H8W2 130 aa3.88□□□□□ -1.79
USP46-202ENST00000451218 LPAP08519 4548 aa3.88□□□□□ -1.79
USP46-202ENST00000451218 MOBPQ13875 183 aa3.88□□□□□ -1.79
USP46-202ENST00000451218 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
USP46-202ENST00000451218 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
USP46-202ENST00000451218 ZNF861PO60384 105 aa3.87□□□□□ -1.79
USP46-202ENST00000451218 IGHV6-1A0A0B4J1U7 121 aa3.87□□□□□ -1.79
USP46-202ENST00000451218 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
USP46-202ENST00000451218 A0A087X002 238 aa3.87□□□□□ -1.79
USP46-202ENST00000451218 LOC101927531A0A1B0GV80 90 aa3.86□□□□□ -1.79
USP46-202ENST00000451218 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
USP46-202ENST00000451218 IGKV2-30P06310 120 aa3.86□□□□□ -1.79
USP46-202ENST00000451218 TMEM254Q8TBM7 123 aa3.85□□□□□ -1.79
USP46-202ENST00000451218 TRAV22A0A0B4J277 110 aa3.85□□□□□ -1.79
USP46-202ENST00000451218 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
USP46-202ENST00000451218 C7orf65Q6ZTY9 151 aa3.85□□□□□ -1.79
USP46-202ENST00000451218 M0R2T5 61 aa3.85□□□□□ -1.79
USP46-202ENST00000451218 SPINK1P00995 79 aa3.85□□□□□ -1.79
USP46-202ENST00000451218 K7EQZ3 153 aa3.84□□□□□ -1.79
USP46-202ENST00000451218 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
USP46-202ENST00000451218 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.8
USP46-202ENST00000451218 OCR1Q9BZK8 76 aa3.84□□□□□ -1.8
USP46-202ENST00000451218 Q75L30 129 aa3.83□□□□□ -1.8
USP46-202ENST00000451218 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
USP46-202ENST00000451218 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
USP46-202ENST00000451218 A0A087WSZ3 146 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 TRAV7A0A075B6U4 112 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 COX7CP15954 63 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 A0A1B0GU69 56 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 HERC2O95714 4834 aa3.8□□□□□ -1.8
USP46-202ENST00000451218 LINC00208Q96KT6 92 aa3.79□□□□□ -1.8
USP46-202ENST00000451218 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
USP46-202ENST00000451218 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
USP46-202ENST00000451218 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.8
USP46-202ENST00000451218 H0Y9P7 68 aa3.78□□□□□ -1.8
USP46-202ENST00000451218 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
USP46-202ENST00000451218 FAM229BQ4G0N7 80 aa3.78□□□□□ -1.8
USP46-202ENST00000451218 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
USP46-202ENST00000451218 XP32Q5T750 250 aa3.77□□□□□ -1.81
USP46-202ENST00000451218 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
USP46-202ENST00000451218 A8MUN3 132 aa3.76□□□□□ -1.81
USP46-202ENST00000451218 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
USP46-202ENST00000451218 KLKP1Q107X0 134 aa3.75□□□□□ -1.81
USP46-202ENST00000451218 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
USP46-202ENST00000451218 A8MWP4 228 aa3.75□□□□□ -1.81
USP46-202ENST00000451218 H7BZZ5 65 aa3.75□□□□□ -1.81
USP46-202ENST00000451218 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
USP46-202ENST00000451218 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
USP46-202ENST00000451218 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
USP46-202ENST00000451218 PCLOQ9Y6V0 5065 aa3.73□□□□□ -1.81
USP46-202ENST00000451218 C1orf64Q8NEQ6 169 aa3.73□□□□□ -1.81
USP46-202ENST00000451218 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
USP46-202ENST00000451218 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
USP46-202ENST00000451218 CSAG1Q6PB30 78 aa3.72□□□□□ -1.81
USP46-202ENST00000451218 RETNLBQ9BQ08 111 aa3.72□□□□□ -1.81
USP46-202ENST00000451218 LRP2P98164 4655 aa3.71□□□□□ -1.82
USP46-202ENST00000451218 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
USP46-202ENST00000451218 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
USP46-202ENST00000451218 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
USP46-202ENST00000451218 Q8N1X5 172 aa3.7□□□□□ -1.82
USP46-202ENST00000451218 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
USP46-202ENST00000451218 A0A1B0GVX0 72 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms