RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 S4R3F8 94 aa1.3□□□□□ -2.2
USP53-202ENST00000450251 A0A0D9SG42 100 aa1.3□□□□□ -2.2
USP53-202ENST00000450251 A0A1W2PPR1 153 aa1.3□□□□□ -2.2
USP53-202ENST00000450251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.3□□□□□ -2.2
USP53-202ENST00000450251 CDH23Q9H251 3354 aa1.3□□□□□ -2.2
USP53-202ENST00000450251 NOTCH3Q9UM47 2321 aa1.3□□□□□ -2.2
USP53-202ENST00000450251 PP632Q6XCG6 107 aa1.29□□□□□ -2.2
USP53-202ENST00000450251 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
USP53-202ENST00000450251 UTP20O75691 2785 aaKnown RBP1.29□□□□□ -2.2
USP53-202ENST00000450251 XP32Q5T750 250 aa1.29□□□□□ -2.2
USP53-202ENST00000450251 FRYLO94915 3013 aa1.29□□□□□ -2.2
USP53-202ENST00000450251 PRRC2CQ9Y520 2896 aaKnown RBP1.29□□□□□ -2.2
USP53-202ENST00000450251 PKD1L1Q8TDX9 2849 aa1.29□□□□□ -2.2
USP53-202ENST00000450251 RYR1P21817 5038 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 ABCA1O95477 2261 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 TRIOO75962 3097 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 WWC2-AS2Q96NR7 200 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 WNK2Q9Y3S1 2297 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 M0QZ58 72 aa1.28□□□□□ -2.2
USP53-202ENST00000450251 FRYQ5TBA9 3013 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 BRCA2P51587 3418 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 CR1P17927 2039 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 DMXL2Q8TDJ6 3036 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 CADP27708 2225 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 A0A087WTM6 91 aa1.27□□□□□ -2.21
USP53-202ENST00000450251 P0C880 135 aa1.26□□□□□ -2.21
USP53-202ENST00000450251 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
USP53-202ENST00000450251 FBN1P35555 2871 aaKnown RBP1.26□□□□□ -2.21
USP53-202ENST00000450251 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
USP53-202ENST00000450251 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
USP53-202ENST00000450251 MEGF8Q7Z7M0 2845 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 H0YAA0 97 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 KRTAP1-3Q8IUG1 177 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 GOLGB1Q14789 3259 aaKnown RBP1.25□□□□□ -2.21
USP53-202ENST00000450251 KRTAP9-3Q9BYQ3 159 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 COL6A3P12111 3177 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 Q6ZSA8 131 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 KRTAP13-1Q8IUC0 172 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 BIRC6Q9NR09 4857 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 SVEP1Q4LDE5 3571 aa1.25□□□□□ -2.21
USP53-202ENST00000450251 MGAQ8IWI9 3026 aa1.24□□□□□ -2.21
USP53-202ENST00000450251 CENPFP49454 3210 aa1.24□□□□□ -2.21
USP53-202ENST00000450251 KRTAP4-8A0A0G2JLE6 195 aa1.24□□□□□ -2.21
USP53-202ENST00000450251 K7EIL1 84 aa1.24□□□□□ -2.21
USP53-202ENST00000450251 TRRAPQ9Y4A5 3859 aa1.24□□□□□ -2.21
USP53-202ENST00000450251 ZANQ9Y493 2812 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 C9orf92A6NGG3 77 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 COL12A1Q99715 3063 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 SORL1Q92673 2214 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 KRTAP24-1Q3LI83 254 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 LAMA3Q16787 3333 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 AKAP9Q99996 3911 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 INE1O15225 51 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 PCNTO95613 3336 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 KRTAP13-3Q3SY46 172 aa1.23□□□□□ -2.21
USP53-202ENST00000450251 R4GN34 69 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 PRUNE2Q8WUY3 3088 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 TACC2O95359 2948 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 DNHD1Q96M86 4753 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 KRTAP15-1Q3LI76 137 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 MUC3AQ02505 3323 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 KRTAP1-1Q07627 177 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 KRTAP10-11P60412 298 aa1.22□□□□□ -2.21
USP53-202ENST00000450251 KRTAP10-3P60369 221 aa1.21□□□□□ -2.22
USP53-202ENST00000450251 KRTAP7-1Q8IUC3 87 aa1.21□□□□□ -2.22
USP53-202ENST00000450251 KRTAP10-9P60411 292 aa1.21□□□□□ -2.22
USP53-202ENST00000450251 KRTAP4-2Q9BYR5 136 aa1.21□□□□□ -2.22
USP53-202ENST00000450251 KRTAP3-1Q9BYR8 98 aa1.21□□□□□ -2.22
USP53-202ENST00000450251 TGP01266 2768 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 ATMQ13315 3056 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 PCLOQ9Y6V0 5065 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 KRTAP5-3Q6L8H2 238 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 LCE3BQ5TA77 95 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 PRO2289Q9P1D8 64 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 HERC2O95714 4834 aa1.2□□□□□ -2.22
USP53-202ENST00000450251 CRYBG3Q68DQ2 2970 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 DNAH12Q6ZR08 3092 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 BOD1L1Q8NFC6 3051 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 SZT2Q5T011 3432 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 RYR2Q92736 4967 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 DCHS1Q96JQ0 3298 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 TNP1P09430 55 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 NBEAL2Q6ZNJ1 2754 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 ASPMQ8IZT6 3477 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
USP53-202ENST00000450251 MKI67P46013 3256 aaKnown RBP1.18□□□□□ -2.22
USP53-202ENST00000450251 VWFP04275 2813 aa1.18□□□□□ -2.22
USP53-202ENST00000450251 C5orf42Q9H799 3197 aa1.18□□□□□ -2.22
USP53-202ENST00000450251 Q6ZRN7 208 aaPredicted RBP1.18□□□□□ -2.22
USP53-202ENST00000450251 TENM2Q9NT68 2774 aa1.18□□□□□ -2.22
USP53-202ENST00000450251 WDFY4Q6ZS81 3184 aa1.17□□□□□ -2.22
USP53-202ENST00000450251 TPRXLQ17RH7 258 aa1.17□□□□□ -2.22
USP53-202ENST00000450251 CFAP47Q6ZTR5 3102 aa1.17□□□□□ -2.22
USP53-202ENST00000450251 SMR3AQ99954 134 aa1.16□□□□□ -2.22
USP53-202ENST00000450251 DNAH7Q8WXX0 4024 aa1.16□□□□□ -2.22
USP53-202ENST00000450251 HYDINQ4G0P3 5121 aa1.16□□□□□ -2.22
USP53-202ENST00000450251 KRTAP4-7Q9BYR0 210 aa1.16□□□□□ -2.22
USP53-202ENST00000450251 UTRNP46939 3433 aa1.16□□□□□ -2.22
USP53-202ENST00000450251 Q5VSD8 79 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms