RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
HLA-DRB9-201ENST00000449413 DSCR10P59022 87 aa7.21□□□□□ -1.26
HLA-DRB9-201ENST00000449413 A8MWP4 228 aa7.19□□□□□ -1.26
HLA-DRB9-201ENST00000449413 K7EQZ3 153 aa7.19□□□□□ -1.26
HLA-DRB9-201ENST00000449413 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
HLA-DRB9-201ENST00000449413 Q8N9L7 120 aa7.18□□□□□ -1.26
HLA-DRB9-201ENST00000449413 RETNLBQ9BQ08 111 aa7.17□□□□□ -1.26
HLA-DRB9-201ENST00000449413 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
HLA-DRB9-201ENST00000449413 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
HLA-DRB9-201ENST00000449413 NDUFB1O75438 58 aa7.14□□□□□ -1.27
HLA-DRB9-201ENST00000449413 PRR15Q8IV56 129 aa7.14□□□□□ -1.27
HLA-DRB9-201ENST00000449413 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
HLA-DRB9-201ENST00000449413 A0A087WVE0 104 aa7.13□□□□□ -1.27
HLA-DRB9-201ENST00000449413 MUC2Q02817 5179 aa7.13□□□□□ -1.27
HLA-DRB9-201ENST00000449413 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
HLA-DRB9-201ENST00000449413 LPAP08519 4548 aa7.11□□□□□ -1.27
HLA-DRB9-201ENST00000449413 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
HLA-DRB9-201ENST00000449413 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
HLA-DRB9-201ENST00000449413 HCG22E2RYF7 251 aa7.08□□□□□ -1.28
HLA-DRB9-201ENST00000449413 C8orf87E5RJ46 101 aa7.08□□□□□ -1.28
HLA-DRB9-201ENST00000449413 C8orf17Q9NRJ1 99 aa7.08□□□□□ -1.28
HLA-DRB9-201ENST00000449413 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
HLA-DRB9-201ENST00000449413 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
HLA-DRB9-201ENST00000449413 A0A0U1RQV1 116 aa7.05□□□□□ -1.28
HLA-DRB9-201ENST00000449413 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
HLA-DRB9-201ENST00000449413 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
HLA-DRB9-201ENST00000449413 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
HLA-DRB9-201ENST00000449413 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
HLA-DRB9-201ENST00000449413 hDV103S1A0JD37 113 aa7.02□□□□□ -1.29
HLA-DRB9-201ENST00000449413 LINC00313P59037 77 aa7.02□□□□□ -1.29
HLA-DRB9-201ENST00000449413 PRR4Q16378 134 aa7.02□□□□□ -1.29
HLA-DRB9-201ENST00000449413 TMEM254Q8TBM7 123 aa7.02□□□□□ -1.29
HLA-DRB9-201ENST00000449413 C9orf92A6NGG3 77 aa7.01□□□□□ -1.29
HLA-DRB9-201ENST00000449413 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
HLA-DRB9-201ENST00000449413 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
HLA-DRB9-201ENST00000449413 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
HLA-DRB9-201ENST00000449413 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
HLA-DRB9-201ENST00000449413 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
HLA-DRB9-201ENST00000449413 ATOX1O00244 68 aa6.96□□□□□ -1.3
HLA-DRB9-201ENST00000449413 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
HLA-DRB9-201ENST00000449413 NDUFS5O43920 106 aa6.92□□□□□ -1.3
HLA-DRB9-201ENST00000449413 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
HLA-DRB9-201ENST00000449413 XP32Q5T750 250 aa6.91□□□□□ -1.3
HLA-DRB9-201ENST00000449413 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
HLA-DRB9-201ENST00000449413 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
HLA-DRB9-201ENST00000449413 A8MUU9 505 aa6.9□□□□□ -1.3
HLA-DRB9-201ENST00000449413 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
HLA-DRB9-201ENST00000449413 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
HLA-DRB9-201ENST00000449413 TRAV7A0A075B6U4 112 aa6.87□□□□□ -1.31
HLA-DRB9-201ENST00000449413 Q75L30 129 aa6.87□□□□□ -1.31
HLA-DRB9-201ENST00000449413 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
HLA-DRB9-201ENST00000449413 UQCRQO14949 82 aa6.85□□□□□ -1.31
HLA-DRB9-201ENST00000449413 RPL37P61927 97 aaKnown RBP6.85□□□□□ -1.31
HLA-DRB9-201ENST00000449413 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
HLA-DRB9-201ENST00000449413 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
HLA-DRB9-201ENST00000449413 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
HLA-DRB9-201ENST00000449413 H0Y9P7 68 aa6.8□□□□□ -1.32
HLA-DRB9-201ENST00000449413 COX7CP15954 63 aa6.8□□□□□ -1.32
HLA-DRB9-201ENST00000449413 CRCT1Q9UGL9 99 aa6.8□□□□□ -1.32
HLA-DRB9-201ENST00000449413 Q5W150 140 aa6.79□□□□□ -1.32
HLA-DRB9-201ENST00000449413 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
HLA-DRB9-201ENST00000449413 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
HLA-DRB9-201ENST00000449413 MP68P56378 58 aa6.77□□□□□ -1.33
HLA-DRB9-201ENST00000449413 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
HLA-DRB9-201ENST00000449413 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
HLA-DRB9-201ENST00000449413 H3BPC8 53 aa6.73□□□□□ -1.33
HLA-DRB9-201ENST00000449413 C20orf197Q8N268 126 aa6.73□□□□□ -1.33
HLA-DRB9-201ENST00000449413 MUC17Q685J3 4493 aa6.73□□□□□ -1.33
HLA-DRB9-201ENST00000449413 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
HLA-DRB9-201ENST00000449413 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.34
HLA-DRB9-201ENST00000449413 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
HLA-DRB9-201ENST00000449413 PCP4P48539 62 aa6.71□□□□□ -1.34
HLA-DRB9-201ENST00000449413 PCOTHQ58A44 107 aa6.71□□□□□ -1.34
HLA-DRB9-201ENST00000449413 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.34
HLA-DRB9-201ENST00000449413 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
HLA-DRB9-201ENST00000449413 SNURFQ9Y675 71 aa6.7□□□□□ -1.34
HLA-DRB9-201ENST00000449413 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
HLA-DRB9-201ENST00000449413 KLKP1Q107X0 134 aa6.69□□□□□ -1.34
HLA-DRB9-201ENST00000449413 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
HLA-DRB9-201ENST00000449413 IGKV2D-30A0A075B6S6 120 aa6.68□□□□□ -1.34
HLA-DRB9-201ENST00000449413 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
HLA-DRB9-201ENST00000449413 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
HLA-DRB9-201ENST00000449413 SPINK7P58062 85 aa6.62□□□□□ -1.35
HLA-DRB9-201ENST00000449413 NDUFC1O43677 76 aa6.59□□□□□ -1.35
HLA-DRB9-201ENST00000449413 H7BZZ5 65 aa6.58□□□□□ -1.36
HLA-DRB9-201ENST00000449413 HRES1P13985 223 aa6.55□□□□□ -1.36
HLA-DRB9-201ENST00000449413 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
HLA-DRB9-201ENST00000449413 TMEM258P61165 79 aa6.5□□□□□ -1.37
HLA-DRB9-201ENST00000449413 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
HLA-DRB9-201ENST00000449413 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
HLA-DRB9-201ENST00000449413 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
HLA-DRB9-201ENST00000449413 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
HLA-DRB9-201ENST00000449413 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
HLA-DRB9-201ENST00000449413 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
HLA-DRB9-201ENST00000449413 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
HLA-DRB9-201ENST00000449413 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
HLA-DRB9-201ENST00000449413 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
HLA-DRB9-201ENST00000449413 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
HLA-DRB9-201ENST00000449413 A8MUN3 132 aa6.42□□□□□ -1.38
HLA-DRB9-201ENST00000449413 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms