RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 LPAP08519 4548 aa8.08□□□□□ -1.12
SHANK2-210ENST00000449116 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
SHANK2-210ENST00000449116 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
SHANK2-210ENST00000449116 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
SHANK2-210ENST00000449116 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
SHANK2-210ENST00000449116 CXCL6P80162 114 aa8.04□□□□□ -1.12
SHANK2-210ENST00000449116 PRR15Q8IV56 129 aa8.04□□□□□ -1.12
SHANK2-210ENST00000449116 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
SHANK2-210ENST00000449116 K7EQZ3 153 aa8.03□□□□□ -1.12
SHANK2-210ENST00000449116 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
SHANK2-210ENST00000449116 LINC00313P59037 77 aa8.02□□□□□ -1.13
SHANK2-210ENST00000449116 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
SHANK2-210ENST00000449116 LINC00643Q86TS7 51 aa8.02□□□□□ -1.13
SHANK2-210ENST00000449116 LRP2P98164 4655 aa8□□□□□ -1.13
SHANK2-210ENST00000449116 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
SHANK2-210ENST00000449116 Q8N9L7 120 aa8□□□□□ -1.13
SHANK2-210ENST00000449116 XP32Q5T750 250 aa7.99□□□□□ -1.13
SHANK2-210ENST00000449116 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SHANK2-210ENST00000449116 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
SHANK2-210ENST00000449116 KRTAP16-1A8MUX0 517 aa7.95□□□□□ -1.14
SHANK2-210ENST00000449116 hDV103S1A0JD37 113 aa7.91□□□□□ -1.14
SHANK2-210ENST00000449116 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
SHANK2-210ENST00000449116 RNF213Q63HN8 5207 aa7.91□□□□□ -1.14
SHANK2-210ENST00000449116 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
SHANK2-210ENST00000449116 A8MUU9 505 aa7.9□□□□□ -1.14
SHANK2-210ENST00000449116 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
SHANK2-210ENST00000449116 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
SHANK2-210ENST00000449116 Q75L30 129 aa7.9□□□□□ -1.14
SHANK2-210ENST00000449116 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
SHANK2-210ENST00000449116 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
SHANK2-210ENST00000449116 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
SHANK2-210ENST00000449116 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
SHANK2-210ENST00000449116 MRPL34Q9BQ48 92 aaKnown RBP7.88□□□□□ -1.15
SHANK2-210ENST00000449116 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
SHANK2-210ENST00000449116 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
SHANK2-210ENST00000449116 MT-ATP8P03928 68 aa7.84□□□□□ -1.15
SHANK2-210ENST00000449116 A0A087WVE0 104 aa7.83□□□□□ -1.16
SHANK2-210ENST00000449116 ATP11AUNQ6ZP68 121 aa7.82□□□□□ -1.16
SHANK2-210ENST00000449116 IMUPQ9GZP8 106 aa7.82□□□□□ -1.16
SHANK2-210ENST00000449116 NDUFS5O43920 106 aa7.8□□□□□ -1.16
SHANK2-210ENST00000449116 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
SHANK2-210ENST00000449116 ZCCHC13Q8WW36 166 aaKnown RBP7.75□□□□□ -1.17
SHANK2-210ENST00000449116 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
SHANK2-210ENST00000449116 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
SHANK2-210ENST00000449116 Q5W150 140 aa7.67□□□□□ -1.18
SHANK2-210ENST00000449116 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
SHANK2-210ENST00000449116 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
SHANK2-210ENST00000449116 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
SHANK2-210ENST00000449116 UQCRQO14949 82 aa7.64□□□□□ -1.19
SHANK2-210ENST00000449116 MUC2Q02817 5179 aa7.63□□□□□ -1.19
SHANK2-210ENST00000449116 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
SHANK2-210ENST00000449116 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
SHANK2-210ENST00000449116 SPINK7P58062 85 aa7.59□□□□□ -1.19
SHANK2-210ENST00000449116 ATOX1O00244 68 aa7.57□□□□□ -1.2
SHANK2-210ENST00000449116 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
SHANK2-210ENST00000449116 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
SHANK2-210ENST00000449116 H0Y9P7 68 aa7.56□□□□□ -1.2
SHANK2-210ENST00000449116 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
SHANK2-210ENST00000449116 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
SHANK2-210ENST00000449116 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
SHANK2-210ENST00000449116 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
SHANK2-210ENST00000449116 MP68P56378 58 aa7.52□□□□□ -1.21
SHANK2-210ENST00000449116 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
SHANK2-210ENST00000449116 HRES1P13985 223 aa7.51□□□□□ -1.21
SHANK2-210ENST00000449116 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
SHANK2-210ENST00000449116 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
SHANK2-210ENST00000449116 H3BPC8 53 aa7.47□□□□□ -1.21
SHANK2-210ENST00000449116 CYP4F30PQ9H0H9 118 aa7.47□□□□□ -1.21
SHANK2-210ENST00000449116 SERP2Q8N6R1 65 aa7.46□□□□□ -1.22
SHANK2-210ENST00000449116 MPLKIPQ8TAP9 179 aa7.46□□□□□ -1.22
SHANK2-210ENST00000449116 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
SHANK2-210ENST00000449116 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
SHANK2-210ENST00000449116 RBM12B-AS1Q9P1G2 102 aa7.45□□□□□ -1.22
SHANK2-210ENST00000449116 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
SHANK2-210ENST00000449116 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
SHANK2-210ENST00000449116 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
SHANK2-210ENST00000449116 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
SHANK2-210ENST00000449116 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
SHANK2-210ENST00000449116 COX7CP15954 63 aa7.37□□□□□ -1.23
SHANK2-210ENST00000449116 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
SHANK2-210ENST00000449116 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
SHANK2-210ENST00000449116 KLKP1Q107X0 134 aa7.36□□□□□ -1.23
SHANK2-210ENST00000449116 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
SHANK2-210ENST00000449116 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
SHANK2-210ENST00000449116 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
SHANK2-210ENST00000449116 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
SHANK2-210ENST00000449116 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
SHANK2-210ENST00000449116 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
SHANK2-210ENST00000449116 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
SHANK2-210ENST00000449116 MT1HP80294 61 aa7.25□□□□□ -1.25
SHANK2-210ENST00000449116 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
SHANK2-210ENST00000449116 A8MUN3 132 aa7.22□□□□□ -1.25
SHANK2-210ENST00000449116 CCDC179H3BU77 68 aa7.2□□□□□ -1.26
SHANK2-210ENST00000449116 NDUFC1O43677 76 aa7.19□□□□□ -1.26
SHANK2-210ENST00000449116 M0R2T5 61 aa7.17□□□□□ -1.26
SHANK2-210ENST00000449116 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
SHANK2-210ENST00000449116 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
SHANK2-210ENST00000449116 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
SHANK2-210ENST00000449116 H7BZZ5 65 aa7.14□□□□□ -1.27
SHANK2-210ENST00000449116 S4R3F8 94 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms