RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 C14orf132Q9NPU4 83 aa13.14□□□□□ -0.31
HTATSF1-203ENST00000448450 LORP23490 312 aaPredicted RBP13.13□□□□□ -0.31
HTATSF1-203ENST00000448450 NOTCH2NLQ7Z3S9 236 aa13.13□□□□□ -0.31
HTATSF1-203ENST00000448450 LOC110117498A0A087WWA1 95 aa13.12□□□□□ -0.31
HTATSF1-203ENST00000448450 IGHV6-1A0A0B4J1U7 121 aa13.12□□□□□ -0.31
HTATSF1-203ENST00000448450 KRTAP10-6P60371 365 aaPredicted RBP13.11□□□□□ -0.31
HTATSF1-203ENST00000448450 C21orf62-AS1Q17RA5 79 aa13.1□□□□□ -0.31
HTATSF1-203ENST00000448450 MTURNQ8N3F0 131 aa13.1□□□□□ -0.31
HTATSF1-203ENST00000448450 PDE6GP18545 87 aa13.08□□□□□ -0.32
HTATSF1-203ENST00000448450 KRTAP16-1A8MUX0 517 aa13.06□□□□□ -0.32
HTATSF1-203ENST00000448450 M0R2T5 61 aa13.06□□□□□ -0.32
HTATSF1-203ENST00000448450 A0A1B0GVX0 72 aa13.04□□□□□ -0.32
HTATSF1-203ENST00000448450 H3BT86 120 aa13.03□□□□□ -0.32
HTATSF1-203ENST00000448450 J3KT08 172 aa13.02□□□□□ -0.33
HTATSF1-203ENST00000448450 A0A1B0GW54 56 aa13.01□□□□□ -0.33
HTATSF1-203ENST00000448450 COX6B2Q6YFQ2 88 aa13.01□□□□□ -0.33
HTATSF1-203ENST00000448450 SPCS1Q9Y6A9 102 aa13.01□□□□□ -0.33
HTATSF1-203ENST00000448450 C8orf87E5RJ46 101 aa12.98□□□□□ -0.33
HTATSF1-203ENST00000448450 COL5A1-AS1Q5SY13 56 aa12.98□□□□□ -0.33
HTATSF1-203ENST00000448450 NDUFB1O75438 58 aa12.94□□□□□ -0.34
HTATSF1-203ENST00000448450 NREPQ16612 68 aa12.93□□□□□ -0.34
HTATSF1-203ENST00000448450 FLGP20930 4061 aaPredicted RBP12.9□□□□□ -0.34
HTATSF1-203ENST00000448450 PCP4L1A6NKN8 68 aa12.9□□□□□ -0.34
HTATSF1-203ENST00000448450 A8MWP4 228 aa12.89□□□□□ -0.35
HTATSF1-203ENST00000448450 SMCPP49901 116 aaPredicted RBP12.87□□□□□ -0.35
HTATSF1-203ENST00000448450 IGKV3D-7A0A0C4DH55 119 aa12.86□□□□□ -0.35
HTATSF1-203ENST00000448450 C8orf17Q9NRJ1 99 aa12.84□□□□□ -0.35
HTATSF1-203ENST00000448450 K7EP34 96 aa12.81□□□□□ -0.36
HTATSF1-203ENST00000448450 PRR15Q8IV56 129 aa12.79□□□□□ -0.36
HTATSF1-203ENST00000448450 PRO0461Q9UI25 63 aa12.77□□□□□ -0.37
HTATSF1-203ENST00000448450 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
HTATSF1-203ENST00000448450 ZCCHC13Q8WW36 166 aaKnown RBP12.74□□□□□ -0.37
HTATSF1-203ENST00000448450 Q6ZVQ6 151 aa12.73□□□□□ -0.37
HTATSF1-203ENST00000448450 BPY2O14599 106 aa12.7□□□□□ -0.38
HTATSF1-203ENST00000448450 K7EQZ3 153 aa12.69□□□□□ -0.38
HTATSF1-203ENST00000448450 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
HTATSF1-203ENST00000448450 MMP24-AS1A0A0U1RRL7 71 aa12.67□□□□□ -0.38
HTATSF1-203ENST00000448450 KRTAP9-7A8MTY7 169 aa12.66□□□□□ -0.38
HTATSF1-203ENST00000448450 HRES1P13985 223 aa12.66□□□□□ -0.38
HTATSF1-203ENST00000448450 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.65□□□□□ -0.38
HTATSF1-203ENST00000448450 FAM236DA0A1B0GTK5 79 aa12.64□□□□□ -0.39
HTATSF1-203ENST00000448450 FAM236CP0DP71 79 aa12.64□□□□□ -0.39
HTATSF1-203ENST00000448450 TMEM254Q8TBM7 123 aa12.63□□□□□ -0.39
HTATSF1-203ENST00000448450 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
HTATSF1-203ENST00000448450 hDV103S1A0JD37 113 aa12.61□□□□□ -0.39
HTATSF1-203ENST00000448450 RBM12B-AS1Q9P1G2 102 aa12.61□□□□□ -0.39
HTATSF1-203ENST00000448450 SPINK7P58062 85 aa12.6□□□□□ -0.39
HTATSF1-203ENST00000448450 Q8N9L7 120 aa12.59□□□□□ -0.39
HTATSF1-203ENST00000448450 MPLKIPQ8TAP9 179 aa12.59□□□□□ -0.39
HTATSF1-203ENST00000448450 LINC00846Q9NV44 126 aa12.59□□□□□ -0.39
HTATSF1-203ENST00000448450 USH2AO75445 5202 aa12.58□□□□□ -0.4
HTATSF1-203ENST00000448450 SSPOA2VEC9 5147 aa12.57□□□□□ -0.4
HTATSF1-203ENST00000448450 F8W1H4 67 aa12.56□□□□□ -0.4
HTATSF1-203ENST00000448450 NDUFS5O43920 106 aa12.56□□□□□ -0.4
HTATSF1-203ENST00000448450 UBL5Q9BZL1 73 aa12.54□□□□□ -0.4
HTATSF1-203ENST00000448450 WFDC13Q8IUB5 93 aa12.53□□□□□ -0.4
HTATSF1-203ENST00000448450 ETDBQ3ZM63 59 aa12.52□□□□□ -0.41
HTATSF1-203ENST00000448450 CASC2Q6XLA1 102 aa12.47□□□□□ -0.41
HTATSF1-203ENST00000448450 KRTAP9-8Q9BYQ0 159 aa12.46□□□□□ -0.41
HTATSF1-203ENST00000448450 HCG22E2RYF7 251 aa12.39□□□□□ -0.43
HTATSF1-203ENST00000448450 Q5W150 140 aa12.39□□□□□ -0.43
HTATSF1-203ENST00000448450 FCGBPQ9Y6R7 5405 aaPredicted RBP12.36□□□□□ -0.43
HTATSF1-203ENST00000448450 IGKV2D-30A0A075B6S6 120 aa12.32□□□□□ -0.44
HTATSF1-203ENST00000448450 IGKV2-30P06310 120 aa12.32□□□□□ -0.44
HTATSF1-203ENST00000448450 CXCL6P80162 114 aa12.27□□□□□ -0.45
HTATSF1-203ENST00000448450 MT2AP02795 61 aa12.25□□□□□ -0.45
HTATSF1-203ENST00000448450 C7orf65Q6ZTY9 151 aa12.24□□□□□ -0.45
HTATSF1-203ENST00000448450 KRTAP19-1Q8IUB9 90 aa12.2□□□□□ -0.46
HTATSF1-203ENST00000448450 ACYP1P07311 99 aa12.18□□□□□ -0.46
HTATSF1-203ENST00000448450 A0A1B0GV90 55 aa12.16□□□□□ -0.46
HTATSF1-203ENST00000448450 LCE2BO14633 110 aa12.16□□□□□ -0.46
HTATSF1-203ENST00000448450 MT1FP04733 61 aa12.15□□□□□ -0.46
HTATSF1-203ENST00000448450 MACF1Q9UPN3 7388 aaKnown RBP12.14□□□□□ -0.47
HTATSF1-203ENST00000448450 H1FX-AS1Q4G0G2 97 aa12.13□□□□□ -0.47
HTATSF1-203ENST00000448450 FAM240AA0A1B0GVK7 77 aa12.11□□□□□ -0.47
HTATSF1-203ENST00000448450 SYNE2Q8WXH0 6885 aaKnown RBP12.1□□□□□ -0.47
HTATSF1-203ENST00000448450 KRTAP10-10P60014 251 aa12.1□□□□□ -0.47
HTATSF1-203ENST00000448450 KRTAP9-3Q9BYQ3 159 aa12.09□□□□□ -0.47
HTATSF1-203ENST00000448450 C4orf26Q17RF5 130 aa12.08□□□□□ -0.48
HTATSF1-203ENST00000448450 TP53AIP1Q9HCN2 124 aa12.08□□□□□ -0.48
HTATSF1-203ENST00000448450 HIST1H4AP62805 103 aaKnown RBP12.01□□□□□ -0.49
HTATSF1-203ENST00000448450 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
HTATSF1-203ENST00000448450 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
HTATSF1-203ENST00000448450 KRTAP3-1Q9BYR8 98 aa11.88□□□□□ -0.51
HTATSF1-203ENST00000448450 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
HTATSF1-203ENST00000448450 A0A087WVE0 104 aa11.86□□□□□ -0.51
HTATSF1-203ENST00000448450 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
HTATSF1-203ENST00000448450 KRTAP19-6Q3LI70 58 aa11.85□□□□□ -0.51
HTATSF1-203ENST00000448450 CYP4F30PQ9H0H9 118 aa11.84□□□□□ -0.51
HTATSF1-203ENST00000448450 UQCRQO14949 82 aa11.79□□□□□ -0.52
HTATSF1-203ENST00000448450 C5orf47Q569G3 176 aa11.77□□□□□ -0.53
HTATSF1-203ENST00000448450 LOC101927531A0A1B0GV80 90 aa11.76□□□□□ -0.53
HTATSF1-203ENST00000448450 S4R3F8 94 aa11.76□□□□□ -0.53
HTATSF1-203ENST00000448450 J3QR89 54 aa11.75□□□□□ -0.53
HTATSF1-203ENST00000448450 H0Y9P7 68 aa11.74□□□□□ -0.53
HTATSF1-203ENST00000448450 LCA10Q71F78 164 aa11.68□□□□□ -0.54
HTATSF1-203ENST00000448450 ATOX1O00244 68 aa11.67□□□□□ -0.54
HTATSF1-203ENST00000448450 CSAG1Q6PB30 78 aa11.64□□□□□ -0.55
HTATSF1-203ENST00000448450 KRTAP6-3Q3LI67 103 aa11.63□□□□□ -0.55
HTATSF1-203ENST00000448450 LINC00208Q96KT6 92 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms