RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 A0A087X002 238 aa8.82□□□□□ -1
SF1-211ENST00000448404 A8MWP4 228 aa8.82□□□□□ -1
SF1-211ENST00000448404 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
SF1-211ENST00000448404 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SF1-211ENST00000448404 KRTAP10-1P60331 282 aa8.82□□□□□ -1
SF1-211ENST00000448404 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
SF1-211ENST00000448404 SACSQ9NZJ4 4579 aa8.8□□□□□ -1
SF1-211ENST00000448404 IGLV7-43P04211 117 aa8.79□□□□□ -1
SF1-211ENST00000448404 LINC00483Q53H64 154 aa8.79□□□□□ -1
SF1-211ENST00000448404 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
SF1-211ENST00000448404 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
SF1-211ENST00000448404 NDUFB1O75438 58 aa8.79□□□□□ -1
SF1-211ENST00000448404 MP68P56378 58 aa8.79□□□□□ -1
SF1-211ENST00000448404 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
SF1-211ENST00000448404 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
SF1-211ENST00000448404 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
SF1-211ENST00000448404 H0Y9P7 68 aa8.73□□□□□ -1.01
SF1-211ENST00000448404 ZNF706Q9Y5V0 76 aaPredicted RBP8.72□□□□□ -1.01
SF1-211ENST00000448404 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
SF1-211ENST00000448404 FAT1Q14517 4588 aa8.71□□□□□ -1.01
SF1-211ENST00000448404 NDUFS5O43920 106 aa8.71□□□□□ -1.01
SF1-211ENST00000448404 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
SF1-211ENST00000448404 LCA10Q71F78 164 aa8.69□□□□□ -1.02
SF1-211ENST00000448404 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SF1-211ENST00000448404 A6NED7 52 aa8.68□□□□□ -1.02
SF1-211ENST00000448404 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
SF1-211ENST00000448404 RBM12B-AS1Q9P1G2 102 aa8.67□□□□□ -1.02
SF1-211ENST00000448404 KMT2CQ8NEZ4 4911 aaKnown RBP8.67□□□□□ -1.02
SF1-211ENST00000448404 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
SF1-211ENST00000448404 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
SF1-211ENST00000448404 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
SF1-211ENST00000448404 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.03
SF1-211ENST00000448404 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
SF1-211ENST00000448404 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
SF1-211ENST00000448404 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
SF1-211ENST00000448404 COA5Q86WW8 74 aa8.62□□□□□ -1.03
SF1-211ENST00000448404 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
SF1-211ENST00000448404 ATP11AUNQ6ZP68 121 aa8.61□□□□□ -1.03
SF1-211ENST00000448404 Q6ZSA8 131 aa8.61□□□□□ -1.03
SF1-211ENST00000448404 Q75L30 129 aa8.59□□□□□ -1.03
SF1-211ENST00000448404 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
SF1-211ENST00000448404 Q5W150 140 aa8.57□□□□□ -1.04
SF1-211ENST00000448404 A6NN06 94 aa8.56□□□□□ -1.04
SF1-211ENST00000448404 H3BPC8 53 aa8.56□□□□□ -1.04
SF1-211ENST00000448404 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
SF1-211ENST00000448404 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
SF1-211ENST00000448404 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
SF1-211ENST00000448404 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
SF1-211ENST00000448404 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
SF1-211ENST00000448404 IGLV7-46A0A075B6I9 117 aa8.52□□□□□ -1.05
SF1-211ENST00000448404 RYR2Q92736 4967 aa8.51□□□□□ -1.05
SF1-211ENST00000448404 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
SF1-211ENST00000448404 SSBP3-AS1Q7Z2R9 100 aa8.5□□□□□ -1.05
SF1-211ENST00000448404 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
SF1-211ENST00000448404 SPINK7P58062 85 aa8.49□□□□□ -1.05
SF1-211ENST00000448404 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
SF1-211ENST00000448404 C7orf65Q6ZTY9 151 aa8.47□□□□□ -1.05
SF1-211ENST00000448404 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
SF1-211ENST00000448404 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
SF1-211ENST00000448404 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
SF1-211ENST00000448404 LINC00313P59037 77 aa8.42□□□□□ -1.06
SF1-211ENST00000448404 HRES1P13985 223 aa8.41□□□□□ -1.06
SF1-211ENST00000448404 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
SF1-211ENST00000448404 RYR3Q15413 4870 aa8.38□□□□□ -1.07
SF1-211ENST00000448404 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
SF1-211ENST00000448404 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
SF1-211ENST00000448404 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
SF1-211ENST00000448404 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
SF1-211ENST00000448404 C8orf87E5RJ46 101 aa8.33□□□□□ -1.08
SF1-211ENST00000448404 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
SF1-211ENST00000448404 A0A1B0GVY2 172 aa8.32□□□□□ -1.08
SF1-211ENST00000448404 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
SF1-211ENST00000448404 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
SF1-211ENST00000448404 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SF1-211ENST00000448404 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
SF1-211ENST00000448404 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
SF1-211ENST00000448404 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
SF1-211ENST00000448404 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
SF1-211ENST00000448404 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
SF1-211ENST00000448404 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
SF1-211ENST00000448404 SPINK1P00995 79 aa8.23□□□□□ -1.09
SF1-211ENST00000448404 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
SF1-211ENST00000448404 HSPG2P98160 4391 aa8.22□□□□□ -1.09
SF1-211ENST00000448404 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
SF1-211ENST00000448404 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
SF1-211ENST00000448404 H3BS24 57 aa8.15□□□□□ -1.1
SF1-211ENST00000448404 ACYP2P14621 99 aa8.15□□□□□ -1.1
SF1-211ENST00000448404 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
SF1-211ENST00000448404 Q8N1X5 172 aa8.14□□□□□ -1.11
SF1-211ENST00000448404 A0A1B0GU69 56 aa8.12□□□□□ -1.11
SF1-211ENST00000448404 EPPK1P58107 5090 aaKnown RBP8.11□□□□□ -1.11
SF1-211ENST00000448404 TNXBP22105 4242 aa8.11□□□□□ -1.11
SF1-211ENST00000448404 RYR1P21817 5038 aa8.1□□□□□ -1.11
SF1-211ENST00000448404 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
SF1-211ENST00000448404 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
SF1-211ENST00000448404 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
SF1-211ENST00000448404 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
SF1-211ENST00000448404 Q5VSD8 79 aa8.02□□□□□ -1.13
SF1-211ENST00000448404 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
SF1-211ENST00000448404 UQCR11O14957 56 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms