RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 UBE2V1Q13404 147 aa13.95□□□□□ -0.18
CBX4-202ENST00000448310 A0A1B0GVX0 72 aa13.94□□□□□ -0.18
CBX4-202ENST00000448310 KRTAP9-3Q9BYQ3 159 aa13.94□□□□□ -0.18
CBX4-202ENST00000448310 C8orf87E5RJ46 101 aa13.92□□□□□ -0.18
CBX4-202ENST00000448310 KRTAP19-1Q8IUB9 90 aa13.91□□□□□ -0.18
CBX4-202ENST00000448310 PYY3Q5JQD4 70 aa13.88□□□□□ -0.19
CBX4-202ENST00000448310 RBM3P98179 157 aaKnown RBP13.86□□□□□ -0.19
CBX4-202ENST00000448310 ZCCHC13Q8WW36 166 aaKnown RBP13.85□□□□□ -0.19
CBX4-202ENST00000448310 DSCR8Q96T75 97 aa13.83□□□□□ -0.2
CBX4-202ENST00000448310 SPINK7P58062 85 aa13.81□□□□□ -0.2
CBX4-202ENST00000448310 MTURNQ8N3F0 131 aa13.81□□□□□ -0.2
CBX4-202ENST00000448310 SCGB1C2P0DMR2 95 aa13.8□□□□□ -0.2
CBX4-202ENST00000448310 J3KT08 172 aa13.76□□□□□ -0.21
CBX4-202ENST00000448310 UQCR10Q9UDW1 63 aa13.75□□□□□ -0.21
CBX4-202ENST00000448310 C9JAW5 83 aa13.73□□□□□ -0.21
CBX4-202ENST00000448310 BAALC-AS2P0C853 105 aa13.73□□□□□ -0.21
CBX4-202ENST00000448310 Q6ZQT0 140 aa13.72□□□□□ -0.21
CBX4-202ENST00000448310 Q8N9P0 234 aaPredicted RBP13.7□□□□□ -0.22
CBX4-202ENST00000448310 MACF1Q9UPN3 7388 aaKnown RBP13.68□□□□□ -0.22
CBX4-202ENST00000448310 NDUFB1O75438 58 aa13.67□□□□□ -0.22
CBX4-202ENST00000448310 C21orf62-AS1Q17RA5 79 aa13.67□□□□□ -0.22
CBX4-202ENST00000448310 WFDC13Q8IUB5 93 aa13.66□□□□□ -0.22
CBX4-202ENST00000448310 SYNE2Q8WXH0 6885 aaKnown RBP13.65□□□□□ -0.22
CBX4-202ENST00000448310 C8orf17Q9NRJ1 99 aa13.64□□□□□ -0.23
CBX4-202ENST00000448310 LYRM7Q5U5X0 104 aa13.62□□□□□ -0.23
CBX4-202ENST00000448310 A8MWP4 228 aa13.6□□□□□ -0.23
CBX4-202ENST00000448310 IGKV3D-7A0A0C4DH55 119 aa13.57□□□□□ -0.24
CBX4-202ENST00000448310 NAA38Q9BRA0 125 aaKnown RBP13.54□□□□□ -0.24
CBX4-202ENST00000448310 KRTAP19-6Q3LI70 58 aa13.52□□□□□ -0.25
CBX4-202ENST00000448310 Q6ZVQ6 151 aa13.52□□□□□ -0.25
CBX4-202ENST00000448310 LOC110117498A0A087WWA1 95 aa13.51□□□□□ -0.25
CBX4-202ENST00000448310 JMJD7-PLA2G4BH0Y9G9 81 aa13.51□□□□□ -0.25
CBX4-202ENST00000448310 ATXN8Q156A1 80 aa13.5□□□□□ -0.25
CBX4-202ENST00000448310 TMA7Q9Y2S6 64 aaKnown RBP13.5□□□□□ -0.25
CBX4-202ENST00000448310 LINC00846Q9NV44 126 aa13.48□□□□□ -0.25
CBX4-202ENST00000448310 A0A1B0GW54 56 aa13.47□□□□□ -0.25
CBX4-202ENST00000448310 C14orf132Q9NPU4 83 aa13.46□□□□□ -0.25
CBX4-202ENST00000448310 PRR15Q8IV56 129 aa13.44□□□□□ -0.26
CBX4-202ENST00000448310 PDE6GP18545 87 aa13.41□□□□□ -0.26
CBX4-202ENST00000448310 MMP24-AS1A0A0U1RRL7 71 aa13.4□□□□□ -0.26
CBX4-202ENST00000448310 NREPQ16612 68 aa13.38□□□□□ -0.27
CBX4-202ENST00000448310 MRPL34Q9BQ48 92 aaKnown RBP13.38□□□□□ -0.27
CBX4-202ENST00000448310 TMEM254Q8TBM7 123 aa13.37□□□□□ -0.27
CBX4-202ENST00000448310 M0R143 59 aa13.36□□□□□ -0.27
CBX4-202ENST00000448310 H1FX-AS1Q4G0G2 97 aa13.34□□□□□ -0.27
CBX4-202ENST00000448310 NDUFS5O43920 106 aa13.3□□□□□ -0.28
CBX4-202ENST00000448310 hDV103S1A0JD37 113 aa13.28□□□□□ -0.28
CBX4-202ENST00000448310 K7EQZ3 153 aa13.28□□□□□ -0.28
CBX4-202ENST00000448310 IGKV2D-30A0A075B6S6 120 aa13.23□□□□□ -0.29
CBX4-202ENST00000448310 IGKV2-30P06310 120 aa13.23□□□□□ -0.29
CBX4-202ENST00000448310 Q5W150 140 aa13.18□□□□□ -0.3
CBX4-202ENST00000448310 C7orf65Q6ZTY9 151 aa13.14□□□□□ -0.31
CBX4-202ENST00000448310 BPY2O14599 106 aa13.1□□□□□ -0.31
CBX4-202ENST00000448310 BATFQ16520 125 aa13.09□□□□□ -0.31
CBX4-202ENST00000448310 KRTAP6-3Q3LI67 103 aa13.09□□□□□ -0.31
CBX4-202ENST00000448310 H3BT86 120 aa13.05□□□□□ -0.32
CBX4-202ENST00000448310 Q8N9L7 120 aa13.05□□□□□ -0.32
CBX4-202ENST00000448310 C4orf26Q17RF5 130 aa13.04□□□□□ -0.32
CBX4-202ENST00000448310 HCG22E2RYF7 251 aa13.01□□□□□ -0.33
CBX4-202ENST00000448310 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
CBX4-202ENST00000448310 SMIM6P0DI80 62 aa12.97□□□□□ -0.33
CBX4-202ENST00000448310 C9orf118A6NHY6 69 aa12.95□□□□□ -0.34
CBX4-202ENST00000448310 TSTD3H0UI37 97 aa12.95□□□□□ -0.34
CBX4-202ENST00000448310 C5orf47Q569G3 176 aa12.93□□□□□ -0.34
CBX4-202ENST00000448310 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
CBX4-202ENST00000448310 TAX1BP3O14907 124 aa12.9□□□□□ -0.34
CBX4-202ENST00000448310 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
CBX4-202ENST00000448310 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
CBX4-202ENST00000448310 CXCL6P80162 114 aa12.88□□□□□ -0.35
CBX4-202ENST00000448310 NEBP20929 6669 aa12.84□□□□□ -0.35
CBX4-202ENST00000448310 KRTAP3-1Q9BYR8 98 aa12.84□□□□□ -0.35
CBX4-202ENST00000448310 MT1BP07438 61 aa12.8□□□□□ -0.36
CBX4-202ENST00000448310 S4R3F8 94 aa12.79□□□□□ -0.36
CBX4-202ENST00000448310 A6NN06 94 aa12.78□□□□□ -0.36
CBX4-202ENST00000448310 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
CBX4-202ENST00000448310 Q5VV11 94 aa12.73□□□□□ -0.37
CBX4-202ENST00000448310 C1orf64Q8NEQ6 169 aa12.72□□□□□ -0.37
CBX4-202ENST00000448310 SPCS1Q9Y6A9 102 aa12.72□□□□□ -0.37
CBX4-202ENST00000448310 CSAG1Q6PB30 78 aa12.71□□□□□ -0.37
CBX4-202ENST00000448310 LCA10Q71F78 164 aa12.71□□□□□ -0.37
CBX4-202ENST00000448310 SPRR2GQ9BYE4 73 aa12.69□□□□□ -0.38
CBX4-202ENST00000448310 MUC12Q9UKN1 5478 aa12.68□□□□□ -0.38
CBX4-202ENST00000448310 KRTAP19-8Q3LI54 63 aa12.68□□□□□ -0.38
CBX4-202ENST00000448310 UBL5Q9BZL1 73 aa12.67□□□□□ -0.38
CBX4-202ENST00000448310 KRTAP10-5P60370 271 aa12.56□□□□□ -0.4
CBX4-202ENST00000448310 PRO0461Q9UI25 63 aa12.55□□□□□ -0.4
CBX4-202ENST00000448310 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
CBX4-202ENST00000448310 TP53AIP1Q9HCN2 124 aa12.51□□□□□ -0.41
CBX4-202ENST00000448310 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
CBX4-202ENST00000448310 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
CBX4-202ENST00000448310 K7EP34 96 aa12.41□□□□□ -0.42
CBX4-202ENST00000448310 A0A087WVE0 104 aa12.4□□□□□ -0.42
CBX4-202ENST00000448310 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
CBX4-202ENST00000448310 COL5A1-AS1Q5SY13 56 aa12.36□□□□□ -0.43
CBX4-202ENST00000448310 KRTAP5-9P26371 169 aa12.33□□□□□ -0.44
CBX4-202ENST00000448310 KRTAP20-1Q3LI63 56 aa12.32□□□□□ -0.44
CBX4-202ENST00000448310 IMUPQ9GZP8 106 aa12.31□□□□□ -0.44
CBX4-202ENST00000448310 KMT2DO14686 5537 aa12.31□□□□□ -0.44
CBX4-202ENST00000448310 CRIPTQ9P021 101 aa12.29□□□□□ -0.44
CBX4-202ENST00000448310 MDN1Q9NU22 5596 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms