RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 KRTAP16-1A8MUX0 517 aa13.05□□□□□ -0.32
UFD1-204ENST00000447868 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
UFD1-204ENST00000447868 A0A1B0GVX0 72 aa13.02□□□□□ -0.33
UFD1-204ENST00000447868 J3KT08 172 aa13.02□□□□□ -0.33
UFD1-204ENST00000447868 H3BT86 120 aa13.01□□□□□ -0.33
UFD1-204ENST00000447868 COX6B2Q6YFQ2 88 aa13.01□□□□□ -0.33
UFD1-204ENST00000447868 MT1HP80294 61 aa13□□□□□ -0.33
UFD1-204ENST00000447868 A0A1B0GW54 56 aa12.99□□□□□ -0.33
UFD1-204ENST00000447868 C8orf87E5RJ46 101 aa12.97□□□□□ -0.33
UFD1-204ENST00000447868 SPCS1Q9Y6A9 102 aa12.96□□□□□ -0.33
UFD1-204ENST00000447868 COL5A1-AS1Q5SY13 56 aa12.94□□□□□ -0.34
UFD1-204ENST00000447868 NDUFB1O75438 58 aa12.92□□□□□ -0.34
UFD1-204ENST00000447868 NREPQ16612 68 aa12.89□□□□□ -0.35
UFD1-204ENST00000447868 KRTAP9-2Q9BYQ4 174 aa12.89□□□□□ -0.35
UFD1-204ENST00000447868 A8MWP4 228 aa12.87□□□□□ -0.35
UFD1-204ENST00000447868 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
UFD1-204ENST00000447868 M0R2T5 61 aa12.82□□□□□ -0.36
UFD1-204ENST00000447868 C8orf17Q9NRJ1 99 aa12.82□□□□□ -0.36
UFD1-204ENST00000447868 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
UFD1-204ENST00000447868 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
UFD1-204ENST00000447868 FLGP20930 4061 aaPredicted RBP12.78□□□□□ -0.36
UFD1-204ENST00000447868 K7EP34 96 aa12.77□□□□□ -0.37
UFD1-204ENST00000447868 PRR15Q8IV56 129 aa12.76□□□□□ -0.37
UFD1-204ENST00000447868 ZCCHC13Q8WW36 166 aaKnown RBP12.74□□□□□ -0.37
UFD1-204ENST00000447868 Q8N9P0 234 aaPredicted RBP12.73□□□□□ -0.37
UFD1-204ENST00000447868 PRO0461Q9UI25 63 aa12.73□□□□□ -0.37
UFD1-204ENST00000447868 KRTAP10-6P60371 365 aaPredicted RBP12.72□□□□□ -0.37
UFD1-204ENST00000447868 Q6ZVQ6 151 aa12.71□□□□□ -0.37
UFD1-204ENST00000447868 K7EQZ3 153 aa12.68□□□□□ -0.38
UFD1-204ENST00000447868 LORP23490 312 aaPredicted RBP12.68□□□□□ -0.38
UFD1-204ENST00000447868 BPY2O14599 106 aa12.67□□□□□ -0.38
UFD1-204ENST00000447868 MMP24-AS1A0A0U1RRL7 71 aa12.66□□□□□ -0.38
UFD1-204ENST00000447868 HRES1P13985 223 aa12.66□□□□□ -0.38
UFD1-204ENST00000447868 FAM236DA0A1B0GTK5 79 aa12.64□□□□□ -0.39
UFD1-204ENST00000447868 FAM236CP0DP71 79 aa12.64□□□□□ -0.39
UFD1-204ENST00000447868 GTF2H5Q6ZYL4 71 aa12.64□□□□□ -0.39
UFD1-204ENST00000447868 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
UFD1-204ENST00000447868 MRPL34Q9BQ48 92 aaKnown RBP12.61□□□□□ -0.39
UFD1-204ENST00000447868 RBM12B-AS1Q9P1G2 102 aa12.61□□□□□ -0.39
UFD1-204ENST00000447868 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
UFD1-204ENST00000447868 hDV103S1A0JD37 113 aa12.59□□□□□ -0.39
UFD1-204ENST00000447868 SPINK7P58062 85 aa12.58□□□□□ -0.4
UFD1-204ENST00000447868 MPLKIPQ8TAP9 179 aa12.58□□□□□ -0.4
UFD1-204ENST00000447868 Q8N9L7 120 aa12.56□□□□□ -0.4
UFD1-204ENST00000447868 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
UFD1-204ENST00000447868 NDUFS5O43920 106 aa12.54□□□□□ -0.4
UFD1-204ENST00000447868 F8W1H4 67 aa12.52□□□□□ -0.41
UFD1-204ENST00000447868 UBL5Q9BZL1 73 aa12.52□□□□□ -0.41
UFD1-204ENST00000447868 WFDC13Q8IUB5 93 aa12.49□□□□□ -0.41
UFD1-204ENST00000447868 ETDBQ3ZM63 59 aa12.47□□□□□ -0.41
UFD1-204ENST00000447868 CASC2Q6XLA1 102 aa12.45□□□□□ -0.42
UFD1-204ENST00000447868 KRTAP9-6A0A140TA67 174 aa12.38□□□□□ -0.43
UFD1-204ENST00000447868 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
UFD1-204ENST00000447868 Q5W150 140 aa12.35□□□□□ -0.43
UFD1-204ENST00000447868 KRTAP9-8Q9BYQ0 159 aa12.31□□□□□ -0.44
UFD1-204ENST00000447868 IGKV2D-30A0A075B6S6 120 aa12.3□□□□□ -0.44
UFD1-204ENST00000447868 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
UFD1-204ENST00000447868 CXCL6P80162 114 aa12.25□□□□□ -0.45
UFD1-204ENST00000447868 C7orf65Q6ZTY9 151 aa12.24□□□□□ -0.45
UFD1-204ENST00000447868 CRCT1Q9UGL9 99 aa12.21□□□□□ -0.45
UFD1-204ENST00000447868 FSIP2Q5CZC0 6907 aa12.2□□□□□ -0.46
UFD1-204ENST00000447868 MT2AP02795 61 aa12.18□□□□□ -0.46
UFD1-204ENST00000447868 ACYP1P07311 99 aa12.15□□□□□ -0.46
UFD1-204ENST00000447868 H1FX-AS1Q4G0G2 97 aa12.11□□□□□ -0.47
UFD1-204ENST00000447868 A0A1B0GV90 55 aa12.1□□□□□ -0.47
UFD1-204ENST00000447868 FAM240AA0A1B0GVK7 77 aa12.09□□□□□ -0.47
UFD1-204ENST00000447868 MT1FP04733 61 aa12.09□□□□□ -0.47
UFD1-204ENST00000447868 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
UFD1-204ENST00000447868 KRTAP10-10P60014 251 aa12.06□□□□□ -0.48
UFD1-204ENST00000447868 C4orf26Q17RF5 130 aa12.05□□□□□ -0.48
UFD1-204ENST00000447868 ATP5EP2Q5VTU8 51 aa12□□□□□ -0.49
UFD1-204ENST00000447868 HIST1H4AP62805 103 aaKnown RBP11.97□□□□□ -0.49
UFD1-204ENST00000447868 KRTAP9-3Q9BYQ3 159 aa11.92□□□□□ -0.5
UFD1-204ENST00000447868 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
UFD1-204ENST00000447868 KRTAP3-1Q9BYR8 98 aa11.86□□□□□ -0.51
UFD1-204ENST00000447868 C1orf64Q8NEQ6 169 aa11.85□□□□□ -0.51
UFD1-204ENST00000447868 USH2AO75445 5202 aa11.84□□□□□ -0.51
UFD1-204ENST00000447868 TRAV22A0A0B4J277 110 aa11.84□□□□□ -0.51
UFD1-204ENST00000447868 LCE2BO14633 110 aa11.84□□□□□ -0.51
UFD1-204ENST00000447868 A0A087WVE0 104 aa11.82□□□□□ -0.52
UFD1-204ENST00000447868 CYP4F30PQ9H0H9 118 aa11.81□□□□□ -0.52
UFD1-204ENST00000447868 UQCRQO14949 82 aa11.76□□□□□ -0.53
UFD1-204ENST00000447868 S4R3F8 94 aa11.76□□□□□ -0.53
UFD1-204ENST00000447868 LOC101927531A0A1B0GV80 90 aa11.75□□□□□ -0.53
UFD1-204ENST00000447868 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
UFD1-204ENST00000447868 H0Y9P7 68 aa11.72□□□□□ -0.53
UFD1-204ENST00000447868 SSPOA2VEC9 5147 aa11.71□□□□□ -0.53
UFD1-204ENST00000447868 J3QR89 54 aa11.71□□□□□ -0.53
UFD1-204ENST00000447868 ATOX1O00244 68 aa11.67□□□□□ -0.54
UFD1-204ENST00000447868 LCA10Q71F78 164 aa11.67□□□□□ -0.54
UFD1-204ENST00000447868 CSAG1Q6PB30 78 aa11.62□□□□□ -0.55
UFD1-204ENST00000447868 KRTAP19-1Q8IUB9 90 aa11.56□□□□□ -0.56
UFD1-204ENST00000447868 OCR1Q9BZK8 76 aa11.56□□□□□ -0.56
UFD1-204ENST00000447868 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
UFD1-204ENST00000447868 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
UFD1-204ENST00000447868 LINC00208Q96KT6 92 aa11.54□□□□□ -0.56
UFD1-204ENST00000447868 MP68P56378 58 aa11.5□□□□□ -0.57
UFD1-204ENST00000447868 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
UFD1-204ENST00000447868 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
UFD1-204ENST00000447868 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms