RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
SSR4-205ENST00000447375 PDE6GP18545 87 aa6.6□□□□□ -1.35
SSR4-205ENST00000447375 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
SSR4-205ENST00000447375 Q6ZQT0 140 aa6.6□□□□□ -1.35
SSR4-205ENST00000447375 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
SSR4-205ENST00000447375 Q75L30 129 aa6.59□□□□□ -1.35
SSR4-205ENST00000447375 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
SSR4-205ENST00000447375 A0A1B0GW54 56 aa6.58□□□□□ -1.36
SSR4-205ENST00000447375 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
SSR4-205ENST00000447375 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
SSR4-205ENST00000447375 SIGMAR1Q99720 223 aa6.58□□□□□ -1.36
SSR4-205ENST00000447375 H3BT86 120 aa6.57□□□□□ -1.36
SSR4-205ENST00000447375 DEFB116Q30KQ4 102 aa6.57□□□□□ -1.36
SSR4-205ENST00000447375 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
SSR4-205ENST00000447375 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
SSR4-205ENST00000447375 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
SSR4-205ENST00000447375 A8MUU9 505 aa6.54□□□□□ -1.36
SSR4-205ENST00000447375 DSCR10P59022 87 aa6.54□□□□□ -1.36
SSR4-205ENST00000447375 LINC00313P59037 77 aa6.54□□□□□ -1.36
SSR4-205ENST00000447375 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
SSR4-205ENST00000447375 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
SSR4-205ENST00000447375 J3KT08 172 aa6.52□□□□□ -1.37
SSR4-205ENST00000447375 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
SSR4-205ENST00000447375 PCP4L1A6NKN8 68 aa6.51□□□□□ -1.37
SSR4-205ENST00000447375 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
SSR4-205ENST00000447375 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
SSR4-205ENST00000447375 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
SSR4-205ENST00000447375 A0A1B0GVX0 72 aa6.5□□□□□ -1.37
SSR4-205ENST00000447375 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
SSR4-205ENST00000447375 K7EP34 96 aa6.48□□□□□ -1.37
SSR4-205ENST00000447375 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
SSR4-205ENST00000447375 NREPQ16612 68 aa6.46□□□□□ -1.38
SSR4-205ENST00000447375 PRO0461Q9UI25 63 aa6.46□□□□□ -1.38
SSR4-205ENST00000447375 A8MWP4 228 aa6.45□□□□□ -1.38
SSR4-205ENST00000447375 NDUFB1O75438 58 aa6.45□□□□□ -1.38
SSR4-205ENST00000447375 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
SSR4-205ENST00000447375 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
SSR4-205ENST00000447375 GTF2H5Q6ZYL4 71 aa6.42□□□□□ -1.38
SSR4-205ENST00000447375 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
SSR4-205ENST00000447375 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
SSR4-205ENST00000447375 F8W1H4 67 aa6.38□□□□□ -1.39
SSR4-205ENST00000447375 Q8N9P0 234 aaPredicted RBP6.38□□□□□ -1.39
SSR4-205ENST00000447375 LCE2BO14633 110 aa6.36□□□□□ -1.39
SSR4-205ENST00000447375 Q6ZVQ6 151 aa6.36□□□□□ -1.39
SSR4-205ENST00000447375 BPY2O14599 106 aa6.35□□□□□ -1.39
SSR4-205ENST00000447375 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
SSR4-205ENST00000447375 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
SSR4-205ENST00000447375 K7EQZ3 153 aa6.33□□□□□ -1.4
SSR4-205ENST00000447375 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
SSR4-205ENST00000447375 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
SSR4-205ENST00000447375 ETDBQ3ZM63 59 aa6.31□□□□□ -1.4
SSR4-205ENST00000447375 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
SSR4-205ENST00000447375 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
SSR4-205ENST00000447375 UBL5Q9BZL1 73 aa6.3□□□□□ -1.4
SSR4-205ENST00000447375 NEBP20929 6669 aa6.3□□□□□ -1.4
SSR4-205ENST00000447375 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
SSR4-205ENST00000447375 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
SSR4-205ENST00000447375 MT2AP02795 61 aa6.27□□□□□ -1.41
SSR4-205ENST00000447375 HRES1P13985 223 aa6.27□□□□□ -1.41
SSR4-205ENST00000447375 Q8N9L7 120 aa6.27□□□□□ -1.41
SSR4-205ENST00000447375 SPINK7P58062 85 aa6.26□□□□□ -1.41
SSR4-205ENST00000447375 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
SSR4-205ENST00000447375 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
SSR4-205ENST00000447375 MT1FP04733 61 aa6.23□□□□□ -1.41
SSR4-205ENST00000447375 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
SSR4-205ENST00000447375 NDUFS5O43920 106 aa6.22□□□□□ -1.41
SSR4-205ENST00000447375 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
SSR4-205ENST00000447375 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
SSR4-205ENST00000447375 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
SSR4-205ENST00000447375 CXCL6P80162 114 aa6.2□□□□□ -1.42
SSR4-205ENST00000447375 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
SSR4-205ENST00000447375 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
SSR4-205ENST00000447375 ACYP1P07311 99 aa6.18□□□□□ -1.42
SSR4-205ENST00000447375 KRTAP20-1Q3LI63 56 aa6.18□□□□□ -1.42
SSR4-205ENST00000447375 A0A1B0GV90 55 aa6.17□□□□□ -1.42
SSR4-205ENST00000447375 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
SSR4-205ENST00000447375 Q5W150 140 aa6.17□□□□□ -1.42
SSR4-205ENST00000447375 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
SSR4-205ENST00000447375 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
SSR4-205ENST00000447375 IGKV2D-30A0A075B6S6 120 aa6.09□□□□□ -1.43
SSR4-205ENST00000447375 IGKV2-30P06310 120 aa6.09□□□□□ -1.43
SSR4-205ENST00000447375 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
SSR4-205ENST00000447375 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
SSR4-205ENST00000447375 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
SSR4-205ENST00000447375 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
SSR4-205ENST00000447375 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
SSR4-205ENST00000447375 HIST1H4AP62805 103 aaKnown RBP6.01□□□□□ -1.45
SSR4-205ENST00000447375 C4orf26Q17RF5 130 aa5.99□□□□□ -1.45
SSR4-205ENST00000447375 J3QR89 54 aa5.97□□□□□ -1.45
SSR4-205ENST00000447375 A0A087WVE0 104 aa5.94□□□□□ -1.46
SSR4-205ENST00000447375 TRAV22A0A0B4J277 110 aa5.94□□□□□ -1.46
SSR4-205ENST00000447375 UQCRQO14949 82 aa5.93□□□□□ -1.46
SSR4-205ENST00000447375 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
SSR4-205ENST00000447375 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
SSR4-205ENST00000447375 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.46
SSR4-205ENST00000447375 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
SSR4-205ENST00000447375 H0Y9P7 68 aa5.87□□□□□ -1.47
SSR4-205ENST00000447375 ATOX1O00244 68 aa5.87□□□□□ -1.47
SSR4-205ENST00000447375 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
SSR4-205ENST00000447375 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms