RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ACYP1P07311 99 aa9.88□□□□□ -0.83
TRAPPC4-203ENST00000447216 BPY2O14599 106 aa9.87□□□□□ -0.83
TRAPPC4-203ENST00000447216 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
TRAPPC4-203ENST00000447216 IGHV6-1A0A0B4J1U7 121 aa9.86□□□□□ -0.83
TRAPPC4-203ENST00000447216 DSCR10P59022 87 aa9.86□□□□□ -0.83
TRAPPC4-203ENST00000447216 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
TRAPPC4-203ENST00000447216 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
TRAPPC4-203ENST00000447216 A8MWP4 228 aa9.84□□□□□ -0.83
TRAPPC4-203ENST00000447216 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
TRAPPC4-203ENST00000447216 J3QR89 54 aa9.82□□□□□ -0.84
TRAPPC4-203ENST00000447216 NDUFB1O75438 58 aa9.82□□□□□ -0.84
TRAPPC4-203ENST00000447216 XP32Q5T750 250 aa9.82□□□□□ -0.84
TRAPPC4-203ENST00000447216 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
TRAPPC4-203ENST00000447216 K7EQZ3 153 aa9.8□□□□□ -0.84
TRAPPC4-203ENST00000447216 Q8N9L7 120 aa9.8□□□□□ -0.84
TRAPPC4-203ENST00000447216 LINC00313P59037 77 aa9.79□□□□□ -0.84
TRAPPC4-203ENST00000447216 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
TRAPPC4-203ENST00000447216 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
TRAPPC4-203ENST00000447216 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
TRAPPC4-203ENST00000447216 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
TRAPPC4-203ENST00000447216 CXCL6P80162 114 aa9.73□□□□□ -0.85
TRAPPC4-203ENST00000447216 K7ERU9 68 aa9.72□□□□□ -0.85
TRAPPC4-203ENST00000447216 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
TRAPPC4-203ENST00000447216 LINC00643Q86TS7 51 aa9.7□□□□□ -0.86
TRAPPC4-203ENST00000447216 MUC17Q685J3 4493 aa9.69□□□□□ -0.86
TRAPPC4-203ENST00000447216 RPL37P61927 97 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-203ENST00000447216 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-203ENST00000447216 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
TRAPPC4-203ENST00000447216 UBR4Q5T4S7 5183 aa9.67□□□□□ -0.86
TRAPPC4-203ENST00000447216 A8MUU9 505 aa9.66□□□□□ -0.86
TRAPPC4-203ENST00000447216 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
TRAPPC4-203ENST00000447216 Q75L30 129 aa9.65□□□□□ -0.86
TRAPPC4-203ENST00000447216 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
TRAPPC4-203ENST00000447216 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
TRAPPC4-203ENST00000447216 TMEM254Q8TBM7 123 aa9.62□□□□□ -0.87
TRAPPC4-203ENST00000447216 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-203ENST00000447216 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
TRAPPC4-203ENST00000447216 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
TRAPPC4-203ENST00000447216 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
TRAPPC4-203ENST00000447216 HIST1H4AP62805 103 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-203ENST00000447216 MRPL34Q9BQ48 92 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-203ENST00000447216 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
TRAPPC4-203ENST00000447216 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-203ENST00000447216 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
TRAPPC4-203ENST00000447216 A0A087WVE0 104 aa9.54□□□□□ -0.88
TRAPPC4-203ENST00000447216 NDUFS5O43920 106 aa9.54□□□□□ -0.88
TRAPPC4-203ENST00000447216 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC4-203ENST00000447216 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
TRAPPC4-203ENST00000447216 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
TRAPPC4-203ENST00000447216 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-203ENST00000447216 H3BS24 57 aa9.46□□□□□ -0.9
TRAPPC4-203ENST00000447216 Q5W150 140 aa9.4□□□□□ -0.9
TRAPPC4-203ENST00000447216 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
TRAPPC4-203ENST00000447216 MUC2Q02817 5179 aa9.38□□□□□ -0.91
TRAPPC4-203ENST00000447216 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
TRAPPC4-203ENST00000447216 SVIPQ8NHG7 77 aa9.34□□□□□ -0.91
TRAPPC4-203ENST00000447216 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
TRAPPC4-203ENST00000447216 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
TRAPPC4-203ENST00000447216 SCGB1A1P11684 91 aa9.28□□□□□ -0.92
TRAPPC4-203ENST00000447216 SPINK7P58062 85 aa9.28□□□□□ -0.92
TRAPPC4-203ENST00000447216 UQCRQO14949 82 aa9.27□□□□□ -0.93
TRAPPC4-203ENST00000447216 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
TRAPPC4-203ENST00000447216 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
TRAPPC4-203ENST00000447216 OCR1Q9BZK8 76 aa9.26□□□□□ -0.93
TRAPPC4-203ENST00000447216 TRAV22A0A0B4J277 110 aa9.23□□□□□ -0.93
TRAPPC4-203ENST00000447216 HRES1P13985 223 aa9.22□□□□□ -0.93
TRAPPC4-203ENST00000447216 H0Y9P7 68 aa9.21□□□□□ -0.94
TRAPPC4-203ENST00000447216 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.94
TRAPPC4-203ENST00000447216 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
TRAPPC4-203ENST00000447216 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
TRAPPC4-203ENST00000447216 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
TRAPPC4-203ENST00000447216 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
TRAPPC4-203ENST00000447216 ATOX1O00244 68 aa9.13□□□□□ -0.95
TRAPPC4-203ENST00000447216 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
TRAPPC4-203ENST00000447216 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 LINC00208Q96KT6 92 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 CYP4F30PQ9H0H9 118 aa9.11□□□□□ -0.95
TRAPPC4-203ENST00000447216 MP68P56378 58 aa9.1□□□□□ -0.95
TRAPPC4-203ENST00000447216 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
TRAPPC4-203ENST00000447216 RBM12B-AS1Q9P1G2 102 aa9.1□□□□□ -0.95
TRAPPC4-203ENST00000447216 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
TRAPPC4-203ENST00000447216 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
TRAPPC4-203ENST00000447216 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
TRAPPC4-203ENST00000447216 FLGP20930 4061 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-203ENST00000447216 H3BPC8 53 aa9.02□□□□□ -0.97
TRAPPC4-203ENST00000447216 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
TRAPPC4-203ENST00000447216 KLKP1Q107X0 134 aa9□□□□□ -0.97
TRAPPC4-203ENST00000447216 MT1HP80294 61 aa8.95□□□□□ -0.98
TRAPPC4-203ENST00000447216 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
TRAPPC4-203ENST00000447216 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
TRAPPC4-203ENST00000447216 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
TRAPPC4-203ENST00000447216 COX7CP15954 63 aa8.89□□□□□ -0.99
TRAPPC4-203ENST00000447216 H1FX-AS1Q4G0G2 97 aa8.89□□□□□ -0.99
TRAPPC4-203ENST00000447216 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
TRAPPC4-203ENST00000447216 M0R2T5 61 aa8.83□□□□□ -1
TRAPPC4-203ENST00000447216 S4R3F8 94 aa8.74□□□□□ -1.01
TRAPPC4-203ENST00000447216 CCDC179H3BU77 68 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms