RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PLA2G1BP04054 148 aaKnown RBP10.11□□□□□ -0.79
SMC6-206ENST00000446852 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
SMC6-206ENST00000446852 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
SMC6-206ENST00000446852 RYR3Q15413 4870 aa10.06□□□□□ -0.8
SMC6-206ENST00000446852 RPS28P62857 69 aaKnown RBP10.05□□□□□ -0.8
SMC6-206ENST00000446852 Q5XG85 94 aa10.05□□□□□ -0.8
SMC6-206ENST00000446852 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
SMC6-206ENST00000446852 OXTP01178 125 aa10.04□□□□□ -0.8
SMC6-206ENST00000446852 H0Y9P7 68 aa10.04□□□□□ -0.8
SMC6-206ENST00000446852 MP68P56378 58 aa10.04□□□□□ -0.8
SMC6-206ENST00000446852 TYMSOSQ8TAI1 123 aa10.04□□□□□ -0.8
SMC6-206ENST00000446852 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
SMC6-206ENST00000446852 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
SMC6-206ENST00000446852 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
SMC6-206ENST00000446852 PRR26Q8N8Z3 221 aa10□□□□□ -0.81
SMC6-206ENST00000446852 TRAV22A0A0B4J277 110 aa9.99□□□□□ -0.81
SMC6-206ENST00000446852 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
SMC6-206ENST00000446852 LIMD2Q9BT23 127 aa9.98□□□□□ -0.81
SMC6-206ENST00000446852 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
SMC6-206ENST00000446852 NDUFS5O43920 106 aa9.97□□□□□ -0.81
SMC6-206ENST00000446852 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
SMC6-206ENST00000446852 H3BPC8 53 aa9.95□□□□□ -0.82
SMC6-206ENST00000446852 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
SMC6-206ENST00000446852 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
SMC6-206ENST00000446852 SPINK1P00995 79 aa9.94□□□□□ -0.82
SMC6-206ENST00000446852 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
SMC6-206ENST00000446852 C8orf87E5RJ46 101 aa9.93□□□□□ -0.82
SMC6-206ENST00000446852 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
SMC6-206ENST00000446852 LINC00313P59037 77 aa9.9□□□□□ -0.82
SMC6-206ENST00000446852 HSPG2P98160 4391 aa9.88□□□□□ -0.83
SMC6-206ENST00000446852 PRR4Q16378 134 aa9.85□□□□□ -0.83
SMC6-206ENST00000446852 Q5W150 140 aa9.85□□□□□ -0.83
SMC6-206ENST00000446852 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
SMC6-206ENST00000446852 KRTAP16-1A8MUX0 517 aa9.83□□□□□ -0.84
SMC6-206ENST00000446852 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
SMC6-206ENST00000446852 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
SMC6-206ENST00000446852 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
SMC6-206ENST00000446852 RYR1P21817 5038 aa9.81□□□□□ -0.84
SMC6-206ENST00000446852 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
SMC6-206ENST00000446852 SPANXA2-OT1Q8N9U9 137 aa9.79□□□□□ -0.84
SMC6-206ENST00000446852 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
SMC6-206ENST00000446852 FAM229AH3BQW9 127 aa9.78□□□□□ -0.84
SMC6-206ENST00000446852 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.85
SMC6-206ENST00000446852 Q5VSD8 79 aa9.75□□□□□ -0.85
SMC6-206ENST00000446852 TNXBP22105 4242 aa9.73□□□□□ -0.85
SMC6-206ENST00000446852 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
SMC6-206ENST00000446852 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
SMC6-206ENST00000446852 FP248Q71RG6 208 aaPredicted RBP9.73□□□□□ -0.85
SMC6-206ENST00000446852 RETNLBQ9BQ08 111 aa9.72□□□□□ -0.85
SMC6-206ENST00000446852 KIAA1109Q2LD37 5005 aa9.71□□□□□ -0.85
SMC6-206ENST00000446852 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.85
SMC6-206ENST00000446852 IGLV7-46A0A075B6I9 117 aa9.71□□□□□ -0.86
SMC6-206ENST00000446852 FLG2Q5D862 2391 aaPredicted RBP9.69□□□□□ -0.86
SMC6-206ENST00000446852 EPPK1P58107 5090 aaKnown RBP9.69□□□□□ -0.86
SMC6-206ENST00000446852 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
SMC6-206ENST00000446852 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
SMC6-206ENST00000446852 Q8N1X5 172 aa9.63□□□□□ -0.87
SMC6-206ENST00000446852 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
SMC6-206ENST00000446852 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
SMC6-206ENST00000446852 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
SMC6-206ENST00000446852 MPLKIPQ8TAP9 179 aa9.59□□□□□ -0.87
SMC6-206ENST00000446852 MYCBP2O75592 4640 aa9.57□□□□□ -0.88
SMC6-206ENST00000446852 COA5Q86WW8 74 aa9.56□□□□□ -0.88
SMC6-206ENST00000446852 HRES1P13985 223 aa9.55□□□□□ -0.88
SMC6-206ENST00000446852 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
SMC6-206ENST00000446852 A8MUU9 505 aa9.51□□□□□ -0.89
SMC6-206ENST00000446852 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
SMC6-206ENST00000446852 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
SMC6-206ENST00000446852 Q1T7F1 81 aa9.48□□□□□ -0.89
SMC6-206ENST00000446852 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
SMC6-206ENST00000446852 DMAC1Q96GE9 116 aa9.44□□□□□ -0.9
SMC6-206ENST00000446852 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
SMC6-206ENST00000446852 ACYP2P14621 99 aa9.39□□□□□ -0.91
SMC6-206ENST00000446852 Q75L30 129 aa9.37□□□□□ -0.91
SMC6-206ENST00000446852 PSPHP1O15172 72 aa9.36□□□□□ -0.91
SMC6-206ENST00000446852 V9GYY9 64 aa9.35□□□□□ -0.91
SMC6-206ENST00000446852 A8MUN3 132 aa9.32□□□□□ -0.92
SMC6-206ENST00000446852 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
SMC6-206ENST00000446852 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
SMC6-206ENST00000446852 SPINK7P58062 85 aa9.27□□□□□ -0.93
SMC6-206ENST00000446852 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
SMC6-206ENST00000446852 Q5VV11 94 aa9.26□□□□□ -0.93
SMC6-206ENST00000446852 XP32Q5T750 250 aa9.25□□□□□ -0.93
SMC6-206ENST00000446852 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
SMC6-206ENST00000446852 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
SMC6-206ENST00000446852 ABCA13Q86UQ4 5058 aa9.22□□□□□ -0.93
SMC6-206ENST00000446852 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
SMC6-206ENST00000446852 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
SMC6-206ENST00000446852 KRTAP3-1Q9BYR8 98 aa9.17□□□□□ -0.94
SMC6-206ENST00000446852 PRO0628Q9UI54 55 aa9.11□□□□□ -0.95
SMC6-206ENST00000446852 LRP2P98164 4655 aa9.1□□□□□ -0.95
SMC6-206ENST00000446852 HERC2O95714 4834 aa9.1□□□□□ -0.95
SMC6-206ENST00000446852 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
SMC6-206ENST00000446852 SVIPQ8NHG7 77 aa9.09□□□□□ -0.95
SMC6-206ENST00000446852 LPAP08519 4548 aa9.09□□□□□ -0.96
SMC6-206ENST00000446852 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
SMC6-206ENST00000446852 COX6B2Q6YFQ2 88 aa9.06□□□□□ -0.96
SMC6-206ENST00000446852 A8MU10 97 aa9.04□□□□□ -0.96
SMC6-206ENST00000446852 A6NED7 52 aa9.03□□□□□ -0.96
SMC6-206ENST00000446852 A0A1B0GU69 56 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms