RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PRR4Q16378 134 aa8.4□□□□□ -1.07
CCNE1-203ENST00000444983 J3KT08 172 aa8.39□□□□□ -1.07
CCNE1-203ENST00000444983 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
CCNE1-203ENST00000444983 DSCR10P59022 87 aa8.37□□□□□ -1.07
CCNE1-203ENST00000444983 UQCRQO14949 82 aa8.35□□□□□ -1.07
CCNE1-203ENST00000444983 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
CCNE1-203ENST00000444983 BPY2O14599 106 aa8.34□□□□□ -1.07
CCNE1-203ENST00000444983 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
CCNE1-203ENST00000444983 A8MWP4 228 aa8.34□□□□□ -1.08
CCNE1-203ENST00000444983 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
CCNE1-203ENST00000444983 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
CCNE1-203ENST00000444983 CXCL6P80162 114 aa8.31□□□□□ -1.08
CCNE1-203ENST00000444983 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
CCNE1-203ENST00000444983 LINC00643Q86TS7 51 aa8.3□□□□□ -1.08
CCNE1-203ENST00000444983 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
CCNE1-203ENST00000444983 LPAP08519 4548 aa8.29□□□□□ -1.08
CCNE1-203ENST00000444983 FAM236AA0A1B0GUQ0 79 aa8.28□□□□□ -1.08
CCNE1-203ENST00000444983 FAM236BA0A1B0GV22 79 aa8.28□□□□□ -1.08
CCNE1-203ENST00000444983 K7EQZ3 153 aa8.28□□□□□ -1.08
CCNE1-203ENST00000444983 NDUFB1O75438 58 aa8.28□□□□□ -1.08
CCNE1-203ENST00000444983 NOTCH2NLQ7Z3S9 236 aa8.28□□□□□ -1.08
CCNE1-203ENST00000444983 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.08
CCNE1-203ENST00000444983 C9orf92A6NGG3 77 aa8.27□□□□□ -1.09
CCNE1-203ENST00000444983 COX7CP15954 63 aa8.27□□□□□ -1.09
CCNE1-203ENST00000444983 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
CCNE1-203ENST00000444983 Q8N9L7 120 aa8.26□□□□□ -1.09
CCNE1-203ENST00000444983 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
CCNE1-203ENST00000444983 LINC00313P59037 77 aa8.24□□□□□ -1.09
CCNE1-203ENST00000444983 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
CCNE1-203ENST00000444983 KRTAP16-1A8MUX0 517 aa8.23□□□□□ -1.09
CCNE1-203ENST00000444983 ATOX1O00244 68 aa8.23□□□□□ -1.09
CCNE1-203ENST00000444983 XP32Q5T750 250 aa8.23□□□□□ -1.09
CCNE1-203ENST00000444983 TMEM258P61165 79 aa8.22□□□□□ -1.09
CCNE1-203ENST00000444983 C8orf17Q9NRJ1 99 aa8.22□□□□□ -1.09
CCNE1-203ENST00000444983 LRP2P98164 4655 aa8.21□□□□□ -1.1
CCNE1-203ENST00000444983 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
CCNE1-203ENST00000444983 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
CCNE1-203ENST00000444983 A8MUU9 505 aa8.14□□□□□ -1.11
CCNE1-203ENST00000444983 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
CCNE1-203ENST00000444983 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
CCNE1-203ENST00000444983 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
CCNE1-203ENST00000444983 Q75L30 129 aa8.13□□□□□ -1.11
CCNE1-203ENST00000444983 TMEM254Q8TBM7 123 aa8.13□□□□□ -1.11
CCNE1-203ENST00000444983 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
CCNE1-203ENST00000444983 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
CCNE1-203ENST00000444983 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
CCNE1-203ENST00000444983 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
CCNE1-203ENST00000444983 WFDC13Q8IUB5 93 aa8.11□□□□□ -1.11
CCNE1-203ENST00000444983 A0A087WVE0 104 aa8.1□□□□□ -1.11
CCNE1-203ENST00000444983 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
CCNE1-203ENST00000444983 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
CCNE1-203ENST00000444983 CYSTM1Q9H1C7 97 aa8.02□□□□□ -1.13
CCNE1-203ENST00000444983 PCOTHQ58A44 107 aa8.01□□□□□ -1.13
CCNE1-203ENST00000444983 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
CCNE1-203ENST00000444983 C4orf26Q17RF5 130 aa8□□□□□ -1.13
CCNE1-203ENST00000444983 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
CCNE1-203ENST00000444983 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
CCNE1-203ENST00000444983 NDUFS5O43920 106 aa7.98□□□□□ -1.13
CCNE1-203ENST00000444983 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
CCNE1-203ENST00000444983 SERP1Q9Y6X1 66 aa7.96□□□□□ -1.13
CCNE1-203ENST00000444983 Q5W150 140 aa7.95□□□□□ -1.14
CCNE1-203ENST00000444983 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
CCNE1-203ENST00000444983 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
CCNE1-203ENST00000444983 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
CCNE1-203ENST00000444983 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
CCNE1-203ENST00000444983 OCR1Q9BZK8 76 aa7.92□□□□□ -1.14
CCNE1-203ENST00000444983 MUC2Q02817 5179 aa7.91□□□□□ -1.14
CCNE1-203ENST00000444983 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
CCNE1-203ENST00000444983 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
CCNE1-203ENST00000444983 KLKP1Q107X0 134 aa7.87□□□□□ -1.15
CCNE1-203ENST00000444983 TRAV7A0A075B6U4 112 aa7.86□□□□□ -1.15
CCNE1-203ENST00000444983 H7BZZ5 65 aa7.86□□□□□ -1.15
CCNE1-203ENST00000444983 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
CCNE1-203ENST00000444983 NDUFC1O43677 76 aa7.83□□□□□ -1.16
CCNE1-203ENST00000444983 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
CCNE1-203ENST00000444983 SPINK7P58062 85 aa7.82□□□□□ -1.16
CCNE1-203ENST00000444983 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
CCNE1-203ENST00000444983 H0Y9P7 68 aa7.77□□□□□ -1.17
CCNE1-203ENST00000444983 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
CCNE1-203ENST00000444983 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
CCNE1-203ENST00000444983 HRES1P13985 223 aa7.75□□□□□ -1.17
CCNE1-203ENST00000444983 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
CCNE1-203ENST00000444983 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
CCNE1-203ENST00000444983 V9GYY9 64 aa7.73□□□□□ -1.17
CCNE1-203ENST00000444983 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
CCNE1-203ENST00000444983 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
CCNE1-203ENST00000444983 MP68P56378 58 aa7.72□□□□□ -1.17
CCNE1-203ENST00000444983 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
CCNE1-203ENST00000444983 SEC61GP60059 68 aa7.71□□□□□ -1.18
CCNE1-203ENST00000444983 H3BPC8 53 aa7.7□□□□□ -1.18
CCNE1-203ENST00000444983 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
CCNE1-203ENST00000444983 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
CCNE1-203ENST00000444983 A0A0U1RQV1 116 aa7.64□□□□□ -1.19
CCNE1-203ENST00000444983 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
CCNE1-203ENST00000444983 BRK1Q8WUW1 75 aa7.64□□□□□ -1.19
CCNE1-203ENST00000444983 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
CCNE1-203ENST00000444983 SNURFQ9Y675 71 aa7.62□□□□□ -1.19
CCNE1-203ENST00000444983 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
CCNE1-203ENST00000444983 COX6B2Q6YFQ2 88 aa7.57□□□□□ -1.2
CCNE1-203ENST00000444983 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms